Equus caballus (horse): 100052396
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Entry
100052396 CDS
T01058
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X7
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100052396 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100052396 (PAN2)
Enzymes [BR:
ecb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100052396 (PAN2)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100052396 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
100052396 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAN2_N
UCH_1
RNase_T
UCH
WD40_like
Motif
Other DBs
NCBI-GeneID:
100052396
NCBI-ProteinID:
XP_001504885
Ensembl:
ENSECAG00000019814
LinkDB
All DBs
Position
6:complement(74865605..74879813)
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AA seq
1198 aa
AA seq
DB search
MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG
VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR
QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDESEDMHSLLLTDSSTLLVGGLQNHILE
IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS
DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP
RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPIGREE
EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADS
DEASGKGNLARLIQRWNRFILTQLHQDMQELEVPQAYRGAGGSSFCSSGDSVIGQLFSCE
MENCSLCRCGSETVRASSTLLFTLSYPEDKTGKNCDFAQVLKRSICLEQNTQAWCDNCEK
YQPTIQTRNIRHLPDILVINCEVNSLKEADFWRVQAEVAFKMAIKKRGGEISKNKEFALA
DWKELGSPEGMLMCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPARAEEE
HGVYVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKH
EAVQFDMNWKVPAILYYIKRNLNSKYNLNIKNPIEASVLLAEASLARKQRKTHTTFIPLM
LNEMPQVGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPF
IDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGL
QKDFRVINLMVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTAL
QLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKSAAVFSSVLAL
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgagggtctggaccctggactagcagagtatgccccggccatgcattctgcc
ttggaccctgtcctggatgcccacctgaacccaagtctactacagaatgtggagctggac
ccggagggagtggccttggaggcgcttcctgtccaggagtcagtgcatataatggaaggt
gtctactctgaattgcacagtgtggtggctgaagtgggtgtgcctgtctccgtctcccac
tttgacttgcacgaggagatgctgtgggtgggaagccatgggggccatgccacttcattt
tttggtccagccttggagcgctactcatcctttcaggtcaatggcagtgatgacattcgg
cagatccagagcctggagaatggtattctttttctcaccaagaacaacctcaagtatatg
gcccgtgggggcctcattatatttgattacctgctggatgagagtgaggatatgcacagt
cttctgctgactgacagcagcactctgctcgttggtgggctacagaaccacatattggag
attgaccttaacactgtccaggagactcagaagtatgcagtcgagacacctggagtcacc
atcatgagacagacaaatcgcttcttcttctgtggtcatacatctggcaaggtttccctg
cgagacctccgtacttttaaggtggagcatgagtttgatgctttctcagggagtctgtca
gattttgatgtacatggcaacctgttggctgcctgcggcttctccagccgcctcaccggc
ctggcctgcgaccgtttcctcaaggtgtatgatctgcgcatgatgcgtgccatcacacca
cttcaagtacatgtggatcctgccttcttgcgcttcatccctacatatacttctcgtctt
gctatcatctctcagtcagggcagtgccagttttgtgagcccacaggcctggccaaccca
gcagacatctttcatgtgaatcctgtggggcctctgctaatgacatttgatgtgtcagcc
agcaagcaggccctggcctttggggattctgagggctgtgtgcacctctggactgattcc
cctgagccttcctttaacccctactcccgtgagactgagtttgctttgccctgtctcgtg
gactcactgcctcctctggactggagccaggacttgctgcctctttccctcatccctgtc
ccactcaccaccgacacacttctctctgactggcctgctgccaactccgctccagctccc
aggcgagcaccccctgtggatgcagagattctgcgcaccatgaagaaagtgggcttcatt
ggctatgcccccaacccccgcaccaggctgcgcaatcagattccttaccgactcaaggag
tcagacagtgaatttgacagcttcagccaggtcactgagtcaccaatagggcgggaagag
gagccacatctccacatggtctctaagaaataccgcaaggtgaccatcaaatactcgaag
ctggggctggaggactttgacttcaaacactacaataagaccctgtttgctggattagag
ccccacatccccaatgcctactgtaactgcatgatccaggtgctctacttcctggagcct
gtgcgctgtctaatccagaaccacctttgccaaaaggagttttgcctagcatgtgagctg
ggcttcctcttccacatgttggatctctcccgaggtgacccctgtcagggcagtaatttt
cttcgggcattccgcaccattcctgaggcctcagcccttggtctgatcctggctgactca
gatgaggcttcaggcaagggcaacctggccaggctcattcagaggtggaatcgcttcatt
ctcactcagctgcatcaggatatgcaagagctggaagtaccccaggcttatcgaggtgct
ggaggcagcagcttttgctcttcgggggactctgtcattgggcagctgttcagctgtgag
atggagaactgcagcctctgccgctgtggcagtgagaccgtgcgagcctcatccaccctg
ctcttcacgctctcctaccctgaggataaaactgggaagaactgtgactttgctcaggtg
ctgaagcgaagcatctgcctggagcagaatacacaggcctggtgtgacaactgtgaaaag
taccagcccacgattcagacccgcaacatccgccatctgccagatattcttgtcatcaat
tgtgaggtgaacagcctgaaagaagctgatttctggagagtgcaggctgaggttgccttc
aagatggcaataaagaagcgtggtggggaaatctccaagaataaagagtttgctttggct
gattggaaggaactagggagtccagagggcatgctgatgtgtccctccattgaggagttg
aagaatgtctggcttcctttctccattcgcatgaagatgaccaagaacaaagggctggat
gtttgcaattggactgatggggatgagatgcagtggggcccagccagggcagaggaggag
catggtgtctatgtgtatgacctgatggctactgtggtacacatcctggactcacgcaca
gggggcagcctggtggctcacattaaagtcggagagacctaccaccagcgcaaggagggc
gttacccaccagcagtggtatctcttcaatgactttcttattgaacctattgataagcat
gaagctgtgcagtttgacatgaattggaaagtgcctgctatcctttattacatcaaaagg
aatcttaattccaaatacaacctaaacatcaagaatcctattgaggcaagtgttctgcta
gctgaagcctcactagcacggaagcagcggaaaacacatactaccttcattccactgatg
ttgaatgagatgccacaggtcggggacctggtgggcctggatgctgagtttgtcaccctt
aatgaggaggaagcagagttgcgcagtgatggcactaagtctaccatcaaaccaagccag
atgtcagtagcgaggattacctgtgttcggggccagggacccaatgagggtatccccttc
attgatgactacatctcaacccaggagcaggtggtagattacttgactcaatactcgggg
ataaagccaggagacctcgatgccaagatttcctctaagcacctcacaactctcaagtct
acctacttaaagcttcgttttcttatagacattggagtcaagtttgtgggtcatggtctg
cagaaggacttccgggtcatcaacctcatggtgcccaaggatcaagtccttgacactgtc
tatttgtttcacatgccccgaaaacgaatgatttccctgcgattccttgcttggtacttt
ctggacctgaagattcaaggggagacccatgacagtattgaggatgcccgcacagccctt
cagctctaccgaaagtatttggagctgagcaaaaatggcactgagcctgagtccttccac
aaagtgctcaagggtctttacgagaagggccgaaagatggactggaaggtgcctgagcct
gagggccagacaagtcccaaaagtgcagctgtcttctcctcagtgctggcgctctga
DBGET
integrated database retrieval system
