Equus caballus (horse): 100052413
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Entry
100052413 CDS
T01058
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecb02000
]
100052413 (TMC5)
03037 Cilium and associated proteins [BR:
ecb03037
]
100052413 (TMC5)
Transporters [BR:
ecb02000
]
Other transporters
Pores ion channels [TC:
1
]
100052413 (TMC5)
Cilium and associated proteins [BR:
ecb03037
]
Other cilia and associated proteins
Stereociliary proteins
100052413 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
100052413
NCBI-ProteinID:
XP_014585580
Ensembl:
ENSECAG00000013392
VGNC:
24155
LinkDB
All DBs
Position
13:complement(28843455..28916886)
Genome browser
AA seq
1081 aa
AA seq
DB search
MSAYYRNNGYEEDPDDPDYSGSRNPTRGYLKTRGYSDSPGPLNHSGYPTSRNPYAADSRT
NPDYPASLAEPDYPGSQSNPDYPGSRSNPYSGGSRRNSDYPASLAEPDYPGSQSNPDYSG
TRSNPYSGGSRRNSDYPGSLAEPDYPGSQGNPDFPGIRSNPYSAGSRRSSDYPKSLAEPN
YLGSWRNPYPPGSSREPDYSESQRNPDFAGSRSSGNYARSRTNPDYLGSLGEPDYPGSQG
NSNHPGPRAGSNHPGSRRNPEYAGSRISPYRDSPAQPDYPGAENQPNSPHFFGEPDYPGA
ENNRNSSNFWGEPDYPDAEDGRASGSSETPEVTRELLNRTSSIQHSFRHGGDGPLGILER
EYEDYPESIEMNSMEMANPYGRSVPGAPGNGYVNPAFVGEGSPSPANGNPPLSGNDWHKS
PQGQKLIASLIPMTSRDRIKAIRSQPRTMEEKRNLRKVADREKSKLSHGIFELSCCAQCL
NSISLAYRRSKNSLSELLSSVSLWQKTLKVIGGKFGTSVLSYFNFLRWLLKFNIFSFIVT
FSFIIIPQFTIAEKNTLPFTGLEFFTGAGYFRDTVMYYGFYTNSTIQHGKGGASYNMQLA
YIFTIGVCLIICFFSLLFSMARYFRNNFINPHIYSRGIAKLIFCWDFTVTHEKAVKLKQK
NLSTEIRENLSEIRQENVKLTLNQQLIRFSAHLAAWVVSTGVAIACCVAVYYLADNNSQF
LQSHRNPGAVLLLPFVVSCINLAVPRFYSMFGLVERYEMPRHEVYILLIRNIFLKISIIG
ILCYYWLNIVALAGEECWETFIGQEIYRLLLMDFVFSLADSFLGEFLRRIIGTRVFTSLG
LQEFDIARNVLELIYAQTLVWIGTFFCPLLPFIQMITLFIMFYVKNISLMMNFQPPSKAW
RASQMMTVFIFLLFFPSFTGVLCIQAITIWRLKPSADCGPFQGLPFFIHAIYSWIDTLSK
RPSYLWVVWIYRNLIGSVHFFFILTLIVLIITYLYWQITEGRKIMIRLLHEQIINEGKDK
MFLIEKLIKLQEMEKRANPSSLPPERRNMEQPVSLHVREHDAARAPDLRFRRSVQEDNPR
A
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctactacaggaataatgggtacgaggaagatccagatgaccctgactattca
gggtctcggaaccctacgcgaggatatttgaaaactcggggttattcagattctccaggt
cctctgaaccactcgggttaccccaccagcaggaacccatacgctgcagactccagaaca
aatccagactatcctgcgtctctagcagaaccagattatcctggatctcagagtaatcca
gactaccctggcagcagaagcaacccatactctggaggctccagaaggaattccgactac
cctgcgtctctagcagaaccagattatcctggatctcagagtaatccagactactctggc
accagaagcaacccatactctggaggctccagaagaaattccgactatcctgggtctcta
gcagaaccagattatcctggatcgcagggtaatccagacttccctggcatcaggagcaat
ccatactctgcaggctccagaagaagctcagactatcccaaatctctggcagagccaaat
tatcttggatcttggagaaatccgtaccctccaggctcatccagagagccagactactct
gaatctcaacgaaatcctgactttgcaggttccaggagcagtggaaactatgcacgctcc
agaacaaatcctgattatcttggctccttgggagaaccagactaccctggatctcaggga
aactctaaccatcctggccccagagccggttccaaccatccaggctccagaaggaatcca
gaatatgctggttccagaatcagtccatatagagactctccggcacagcctgactatcca
ggtgccgagaatcaacctaactctccacacttttttggggaaccagactatcccggtgct
gagaacaatcggaactcttcaaacttttggggggagcccgattacccagatgcggaggat
ggtcgtgcttctggctcttctgagaccccggaagtgaccagggaactgctcaacagaaca
tcttcaatccagcactcatttcgtcatgggggtgacggccccttgggcatccttgagaga
gagtatgaagattaccctgaaagcattgaaatgaattccatggagatggcaaatccatat
ggccgctctgtgccaggtgctcctggaaatggctatgtgaaccctgcgtttgtgggtgaa
ggcagccccagcccagctaatgggaacccgccgttgtctgggaacgattggcacaagtca
ccccaaggacaaaagttaattgcatctctgatacccatgacatccagagacagaattaaa
gccatcaggagccagccaaggaccatggaagagaagaggaaccttaggaaagtggctgac
agagagaagagcaagctctcccacggtatctttgagctcagctgctgcgcacagtgtctg
aactccatttcactggcataccggagatccaagaacagcctgtcggagctgctcagttcc
gtcagcctgtggcagaagacgctcaaggtcatcggaggcaagtttggaaccagcgtcctc
tcctatttcaactttctgaggtggcttttgaagttcaacattttctcgttcatcgtgacc
ttcagcttcatcataatccctcagtttaccatagccgaaaagaacaccctgccgttcacc
gggttggaatttttcactggggcgggttatttccgggacacggtaatgtactacggcttt
tacaccaactccacgatccagcacgggaagggcggggcatcctacaacatgcagctggcc
tacatcttcaccatcggggtgtgtttgatcatctgcttcttcagtttgctgttcagcatg
gcgcggtacttccggaacaatttcattaacccccacatctactccagagggatcgctaaa
cttatcttttgctgggacttcaccgtcactcatgagaaagctgtcaagctgaaacagaag
aatcttagcaccgagataagggagaacctgtccgaaatccgtcaggagaatgtcaagtta
acgctcaatcagcagctgatccgcttctctgcccacctggcagcctgggttgtctctacc
ggggtggccatcgcctgctgtgtagccgtttattacctggctgacaacaactcccagttc
ctacagagccacaggaaccccggcgcggtgctgctgctgcctttcgtcgtgtcctgcatc
aacctggccgtgccacgcttctactccatgttcgggctggtggagcggtatgagatgccg
aggcacgaagtctatatcctcctcatccgaaacatctttctgaaaatatcaatcattgga
attctttgttactattggctcaacattgtggccctggctggtgaagagtgttgggaaacc
ttcattggtcaggaaatctaccggctccttctgatggatttcgtgttctctttagctgat
tccttcctgggggagttcctgcggagaatcatcgggacgcgggttttcacaagtcttggc
ttgcaggagtttgacattgccaggaacgtcctggaactgatctatgcacaaactctggtg
tggatcggaaccttcttctgtcctctgctgccctttatccagatgattactcttttcatc
atgttttacgtcaaaaatatcagcctgatgatgaacttccagcctccgagcaaagcctgg
cgggcgtcacagatgatgacggtcttcatcttcttgctcttttttccatccttcaccggg
gtcctgtgcatccaggccatcaccatctggagattgaaaccttcagctgactgtggcccg
tttcaagggctgcccttcttcattcacgccatctacagctggatcgacaccctgagtaaa
aggcccagctacctgtgggttgtctggatctaccggaacctcatcggaagtgtgcacttc
tttttcatcctcaccctcattgtgttaatcatcacgtatctttactggcagatcacagag
ggaaggaagataatgatcagactgctccatgaacagatcattaatgagggcaaagataaa
atgttcctgatagaaaagttgatcaagctgcaggagatggagaagagagcaaaccccagc
tcgttgccaccggaaaggcgaaacatggagcaaccagtctctttgcacgtcagggaacat
gatgctgctcgtgccccagacctgcgatttaggcgatcagttcaagaagataatccaagg
gcctga
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