Equus caballus (horse): 100052495
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Entry
100052495 CDS
T01058
Symbol
FANCA
Name
(RefSeq) Fanconi anemia group A protein isoform X1
KO
K10888
fanconi anemia group A protein
Organism
ecb
Equus caballus (horse)
Pathway
ecb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100052495 (FANCA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecb03400
]
100052495 (FANCA)
DNA repair and recombination proteins [BR:
ecb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
100052495 (FANCA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_A_N
FANCA_arcN
FANCA_CTD
FANCA_helical
PilJ
Motif
Other DBs
NCBI-GeneID:
100052495
NCBI-ProteinID:
XP_023493312
Ensembl:
ENSECAG00000024214
VGNC:
17898
LinkDB
All DBs
Position
3:complement(36836282..36893349)
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AA seq
1481 aa
AA seq
DB search
MADPRGLDSVSGPAPGARRRAWAELLAGRVTRQKPGPGTRQKVQDSAVRLLRSHLDWSGL
LLEVEGPPCKKLCLGPLIDHDGPEACSDLSTSFIGSALRDHASQLGVPVAVLSSQMAASS
IVRMCAAGAEHAHRVLLDTEQRKKLSSLIEIAQYLLAHSMFSRLFFCQELWKVQNSLSLE
ALWRLHVHNVVSLWELLESCADLQAVVSWLFRNLRLLCEQVEAPCQHTDIARAMLSDFVR
IFVLMGFQKNSDLRRNVEPEQMPQVARDVLERMLLFALEALAAGLQEESPAHKAVSCWFS
TFSGQTFGSIISTDAPKRFFSHTLTQILTHKPVLRVSDAVQMQREWSFAKTPPLLTSLFR
KLFVILSPEELVGHLQEVLETHEVNWQHVLSCVSTLVICLPEAQQLVHDWVARLLARAFE
SCDLDSMVTAFLVVRQAALEGPSVFPSYADWFQASFGSARGSHGCSKKALVFLFKFLSDL
VPFEGARYMQVHILHPPLVPNKYRSLLTDYVTLAKTRLADLKVSIENMGLYEDLSSARDV
TEPHSQAPQDVEKAILLFEHTGKIPVAVMEASIFRRPYYLSHFLPALLTPRVLPRVPDSR
AAFIESLKRADKIPSSLYSTYRHACSTAEKNPENTAPGMKVEPNCVDEPLKLLMIALGGL
RAAMTDPAQYDVLSAQIAVISERLGPALGVSEDDGSCEASKIQLSVLAPELEQQEQKVRV
VDLLLTSFCQNLMAASSFAPPDRQGPWAARFTMTMCGHALLPAVLTRLCQLLHHQGPSLS
ASHVLGLAALAVHLGESRSVLPEVHVGPPAPARDLSIPEFFNSLLTCRTAESSCLCLKFC
TAAISYSLCKFSSQSRDILYCCLSPGLIKKFQFLVFRLFSEARDPLSQEDTAGLAWKPSG
LPSMDWQRAALCLWRQRTFQELLKEKQFHLTYRDWLQLELEIQPEVDSLSDTERRDFHQW
AIHEHFLPQPAAAGGCDGDLETACTVLVDVLLDFCQSSRSHNHSENSDLVLGGCTGNRDI
FSRLQEMAADLEQGPAAPYSHSSSRGHFLFRVFRRRLQALASGWDVAARLRRQQELLMYK
RVLLSLPPLVLVGSPQVEQPAAPGCDEFFHLVNSELRNFCSQGGALSHDITVHFFRGLLN
ACSQSRDPSLTANLTLTACQTECPIVLTSALLWWPRLEPELHCRWRRCFQGPLPPELQRL
QEAQQFAQSFLSPDTAAPAPGPAWVSAAALHFVIQQAGKESVESALEKLDCQREELLVCL
FFFSLMGLLSSHLTPHIRQTSSAKAGDSLKALHVCGEILGFLQKRKISWLVLFQLTETDA
GLGRVLLRLAPEEHIRLLPFAFYSLLSYFDKDALIRENAFLHVAVDMYMKLTCLFVAGET
SAVSTPANRSQELQSQAGAGAGLGTFSSQMAHPTNGDPVGLIRKARLFLLQSIPQCPKKS
FSNMEELLATSGDWDPEVSTALLSRQQAVSDTDLYQEPHLF
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccccgcgggctggacagcgtctctggcccggcgccgggggcccgcaggagg
gcgtgggccgagctgctggcgggaagggtcacgcggcagaagcccggtcctggaacgcgg
cagaaggtgcaggactcagctgtgcgtctcctgaggagccatctggactggagtggcctg
ctgctggaggtagaaggtccaccatgtaaaaaattgtgtctcggcccactgattgatcat
gacggtcctgaggcctgctctgatctttctacttcatttataggctctgctttgagggac
catgcctcgcagctgggagtccccgtggcagtcctgtccagccagatggctgcctccagc
attgtgcggatgtgtgcggcaggggccgagcacgctcacagggtgctgctggacacggag
cagagaaagaagctgtcttccttgatagagatcgctcagtatttattggcacacagtatg
ttctcccgtctcttcttctgtcaagaattatggaaagtacagaattctttgtcacttgaa
gctctgtggcgtcttcatgtacacaacgttgtgagcctctgggagctgctggaaagctgt
gccgacctgcaggccgtggtttcgtggctcttccggaacctgcgccttctgtgtgagcag
gtagaagcaccctgccagcacactgacatcgccagggctatgctttctgattttgtgcga
atatttgttttgatgggatttcagaaaaactcagatctgagaagaaatgtggagcctgaa
cagatgccccaggtcgcccgtgatgtgctggagaggatgctactgtttgcacttgaagct
ttggctgctggcctgcaggaggagtccccagcgcacaaggcagtgagctgctggttcagc
acgttcagtggacagacgtttggcagtataatttcaacagatgctccaaagaggtttttc
agccacactctcactcagatactcacccacaagcctgtgctgagagtttctgatgctgtt
caaatgcagagagagtggagctttgcaaagacgccccctctgctcaccagtctgttccgc
aagctctttgtgatactgagtcctgaggagctggttggccatttacaagaagttctggag
acacatgaggtgaactggcagcacgtgctctcctgtgtgtccacactggtgatctgctta
ccggaagcacagcagctggttcatgactgggtggctcgtttgctggcccgcgcgttcgag
agttgtgacctggacagcatggtcactgcgttcctggttgtgcgtcaggctgccctggag
ggcccctccgtgttcccatcatatgcagactggttccaggcctcctttgggagtgcaagg
ggctcccacggctgcagcaagaaggcactggtcttcctcttcaagttcctgtcggacctc
gtgcccttcgagggagcccggtacatgcaggtgcacattctccacccgccgctggttccc
aacaagtaccgctccctcctcacagactatgtcacgctggccaagacacggctggccgac
ctcaaggtttctatagaaaacatggggctctatgaggatttgtcttcagccagggacgtc
acagagccccacagccaagcgccccaggatgttgagaaggctatcctgctgtttgagcac
acggggaaaattcctgtcgccgtcatggaggccagcatattcaggaggccctactacctg
tctcactttctccccgccctgctcacacctcgagtgctccccagagtccctgattcccga
gcggcttttatagagtccctgaagagagcagataaaatcccctcgtctctgtactccacc
taccgccacgcctgctccactgccgagaagaacccagaaaatacagccccgggaatgaag
gtggaacccaactgtgtggatgaacccttgaaactgctcatgattgcgctgggaggactc
agggcagcgatgacagaccccgcccagtatgacgttctgtctgcccagattgcagtgatt
tctgagaggctcggccccgccttgggcgtcagtgaggacgatggcagctgtgaggcatcg
aagatccagctcagcgtccttgccccagaactggagcagcaagaacagaaggtgagggtt
gtggatctcctgctgacgtctttttgtcagaacctgatggcagcctccagctttgctcca
ccagacaggcagggcccctgggctgcccgcttcacaatgaccatgtgtggacacgcgctc
ctccctgccgtgctcaccaggctctgccagctgctccaccaccagggcccaagcctgagt
gcctcacatgtgttggggttggctgccttggctgtccaccttggcgagtccagatctgtg
ctcccggaggtgcatgtgggccctcctgcccctgccagggatctctccatccctgagttc
ttcaacagcctcctgacgtgcaggaccgcagagtcctcgtgcttgtgcctgaagttttgt
acagcggcaatttcttattctttgtgtaagttttcttcccagtcacgtgatattttgtac
tgctgtttatctccaggccttataaaaaagtttcagttcttggtgttcagattgttctcc
gaagcccgagaccctctctctcaggaggacacagccggccttgcctggaagccctcgggc
ctgccctccatggactggcagcgagctgccctctgtctgtggagacagagaaccttccag
gagttattgaaggagaagcaatttcatttaacttacagagactggttacagctggaactg
gaaattcaacctgaagttgattctctttcagatacagaaaggcgggacttccaccagtgg
gcgatccacgagcatttcctgccccagccggctgctgcagggggctgcgatggagacctg
gagacagcgtgcacagttcttgtcgatgtgctgctggacttctgccaaagttcaaggagt
cacaaccactcagagaattctgatttggttcttggtggctgcacaggaaatcgagatatt
ttttccagattgcaggagatggctgctgacctggagcagggccccgcggcaccctacagc
cactcttcctctcgggggcacttccttttcagggttttccgcagacggctccaggctctg
gcaagtgggtgggacgtggccgcccgccttcggagacagcaggagctgctcatgtacaaa
cgggtcctcctcagcctgcctccgttggtgcttgtcggcagcccccaggtggaacagcca
gccgcccctggctgtgacgagttcttccacttggtcaactctgagctgagaaacttctgc
tcccagggaggtgccctgagccacgacatcaccgtccacttcttcagggggcttctcaac
gcctgttcacaaagtagagacccctccctgacagctaacctgaccctgaccgcgtgccag
accgagtgccccatagttctgacctctgctctgttgtggtggccacgcctggagcctgag
cttcactgtcggtggagaagatgcttccagggcccgctgcccccggagctgcagaggctt
caagaggcccagcagtttgcccagagtttcctctctcccgacacagcagcccctgcccct
ggcccagcctgggtctctgctgccgcgctgcacttcgtgattcaacaagccgggaaggaa
agcgttgagagcgcgctggagaagctggactgccaacgagaggagctgctggtttgcctg
tttttcttttccttgatgggcctgctctcatcacacctgaccccgcacatacgtcagacc
tcatcagctaaggcaggcgactccctgaaggctttgcacgtttgtggcgagatcctgggg
tttttacaaaaaaggaagatatcctggctggtgctctttcaattgacagagacagatgct
ggcctggggcgcgtcctcctccgcctggccccagaggagcacatcaggctcctgccgttc
gccttctacagccttctctcctactttgacaaagatgccctcatcagggaaaatgcattc
ctgcacgtcgctgtcgacatgtacatgaagctgacctgcctctttgtggccggggagaca
agtgcagtctcaactccagccaacaggagccaggagctccagagccaggcaggtgcaggg
gccggacttgggaccttctccagtcagatggcacatcccacaaacggtgaccctgtaggt
ctgataaggaaagctcgtctttttctgctgcaatcaatacctcagtgcccgaaaaagagc
ttctcaaacatggaagagctgctggccactagtggagactgggacccagaagtgagcact
gccctcctgagcaggcagcaggctgtgtccgacactgacctctaccaggagcctcatctc
ttctga
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integrated database retrieval system
