Equus caballus (horse): 100052822
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Entry
100052822 CDS
T01058
Symbol
CDH16
Name
(RefSeq) cadherin-16 isoform X1
KO
K06810
cadherin 16, KSP-cadherin
Organism
ecb
Equus caballus (horse)
Pathway
ecb04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
100052822 (CDH16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecb04515
]
100052822 (CDH16)
Cell adhesion molecules [BR:
ecb04515
]
Cadherins
Major cadherins
100052822 (CDH16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
100052822
NCBI-ProteinID:
XP_014593962
Ensembl:
ENSECAG00000009969
VGNC:
16321
LinkDB
All DBs
Position
3:complement(18139208..18149084)
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AA seq
859 aa
AA seq
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MRPVLTMVPAWLWLLCLSVPQTLLEAQPAELHVEVPENYGGNFPLYLTKLALPRKKAGGR
IVLSGNSDMAAEGPFAVDSESDFLLVTRTLDREEQAEYRLQVTLETEDGRVLWGPQPVLV
HVKDENDQVPRFSQAVYRVRLSRGTRPGIPFLFLVASDGDEPGTANSDLRFHILNQAPAK
PSSDMFQLEPRLGALALSPKGSTSLDQALEGPYKLLVQVKDMGDQASGHQATATIDVSIV
ENTWVPLDPVHLAENLKVLYPHHIAQVHWSGREVHYHLESQPHGLFDVDAEGKLYVTREL
DREAQAEYLLQVRAQNTRGEDYTEPLELHVVVMDENDNVPICPPRGPTISIAELSPPGTK
VTRLLAEDMDAPGSPNSHIVYRLLSSELEEGTEGRAFELDPTSGNVTLGAAPLQAGQNIL
LQVLAIDLGGAEGGLSSTCEVSVTITDINDHAPEFTTSQVSRSRGRDLGKALRGAHSPSP
SLQIEPVCLPEDTESGTLVATLMATDADLEPAFRLMDFAIEAGDEEGTFGLVWEPGSNHV
QLQLLKNLSYEAAPSYQLVVVVRSVAEVVGPGPGPGATATVTVLVERVVPPPKLDQESYE
ASIPVSTPAGSLLLIIQPSDPMSNPLRFSLVNDSEGLLCIEEVSGEVHTARPLRGTRPGD
VYTVLVEAQYADEPALRTSATLVIHFLKAPSAPAPTLAPVPSRHLCTPRQDHGVIVSGPS
EDPDLAGGHGPYSFALGPNPTVQRDWRLQPLNGSHAYLTLALHWVEPREHVVPVVVSHSA
RMWQLLVRVIVCRCNLEGQCMRKVGRMKGMPTKLSAVGILVGTLVAIGIFLILIFTHLTL
ARKKDLDQPVDSVPLKAAV
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccgtcctgaccatggtccctgcctggctgtggctgctctgcctctctgtcccc
cagactctcctggaggcccagcctgcagagctgcatgtggaagtcccagaaaactatggt
ggaaacttccctttgtacctgaccaagctagcgttgccccgtaagaaggctggaggccgg
attgtgctgtcaggaaactcagacatggcagctgaggggccctttgctgtggattcagag
tctgacttcttgctggtgaccaggaccctggaccgagaggaacaggcagagtaccggcta
caggtcaccctggagactgaggatggacgtgtcttgtggggcccacaacctgtgcttgtg
catgtgaaggatgagaacgaccaggtgccccgtttctcccaggccgtctacagagttcgg
ctgagccggggcaccaggcctggcatccccttcctcttccttgtggcttcggatggagat
gagccgggcacagccaactctgaccttcgattccacatcctgaaccaggccccagccaag
ccttcctcagacatgttccagctggagcctcggctgggggccctggccctcagccccaag
ggaagcaccagcctagaccaggccctggaagggccctacaagctgttggtacaggtcaag
gacatgggtgaccaggcctcaggccaccaggccacagccaccatagatgtctccatagta
gagaacacctgggtgcccctagatcccgtccacctggcagagaatctcaaagttctgtac
ccacaccacattgcccaggtacactggagtggcagggaagtacattatcacctggagagc
cagccccatggactttttgatgtggacgcagaggggaaactctacgtgaccagggagctg
gaccgagaagcccaggctgagtatctgctccaggtgcgggctcagaatacccgaggcgaa
gactacacagaacctctggaactgcatgtggtggtgatggatgagaatgacaatgtgccc
atctgccccccacgtggccccacaatcagcatcgctgagctcagcccgccaggcaccaag
gtgaccagactgttggcagaggacatggatgcccctggttcccccaattcccacattgtg
tatcggctgctgagctctgagcttgaggaggggacagaagggagagcctttgagctggat
cccacctcaggcaatgtgacactgggggctgcccccctccaagccggccagaacatcctg
cttcaggtgctggccattgacctaggaggagcagagggcggcctcagcagcacatgtgag
gtctctgtcacgatcacggacatcaatgaccatgcgccggagttcaccacctcccaggta
agcaggagcaggggaagagaccttgggaaggcactgaggggagctcacagcccctcccca
tctctccagattgagcctgtatgcctccctgaggacacagagtccgggactctggtggcc
acactcatggccactgatgccgaccttgagcctgccttccgcctcatggactttgccatc
gaggcaggggatgaggaggggacctttggcctggtttgggagcccggctccaatcatgtc
caactgcaactcctcaagaacctcagctatgaggcagctccaagttaccagttggttgtg
gtggtgcggagtgtggcagaagtggtggggccgggcccaggccctggagccacagccact
gtgactgtgctggtggagagggtggtgccaccccccaagttggaccaggagagctacgag
gccagcatcccagtcagcaccccagccggctccctcctgctgatcatccagccctcagac
cccatgagcaatcccctcaggttctccctggtcaatgactcagagggcttgctctgcatc
gaggaggtctctggggaggtgcacacagcccggcccctgcggggcacccggcctggggat
gtgtacacggtgcttgtggaggcccagtatgcagatgagccggcactgagaacctctgca
accctcgtgatccacttcctgaaggccccttctgccccagccccaactctggcccccgtg
ccctcccgacacctctgcacaccccgccaggaccatggtgtgattgtcagtggacccagt
gaagaccctgacctggctggtgggcatggtccctacagctttgcccttggtcccaacccc
acggtgcagcgggattggcgcctccagcctctcaatggttcccacgcctatctcaccctg
gccctgcattgggtggagccacgtgaacacgtagtccctgtagttgtcagccacagtgca
cggatgtggcagctcctggtccgagtgattgtgtgtcgctgcaacttggaggggcagtgc
atgcgcaaggtgggccgcatgaagggcatgcccacgaagctatcggcagtgggcatcctc
gtgggcaccttggtagcaataggcatcttcctcatcctcatcttcacccacttgaccctg
gcaaggaagaaggatctagatcagccagtggatagtgtgcccctgaaggcagcagtttga
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