Equus caballus (horse): 100052917
Help
Entry
100052917 CDS
T01058
Symbol
TRIM38
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38
KO
K12014
tripartite motif-containing protein 38 [EC:
2.3.2.27
]
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecb04121
]
100052917 (TRIM38)
Enzymes [BR:
ecb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100052917 (TRIM38)
Ubiquitin system [BR:
ecb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100052917 (TRIM38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
U-box
zf-RING_5
zf-RING_10
zf-Nse
Trm112p
Fib_alpha
DUF29
EXOC6_Sec15_N
Zn_ribbon_5
TACC_C
RDM
Motif
Other DBs
NCBI-GeneID:
100052917
NCBI-ProteinID:
XP_001496564
Ensembl:
ENSECAG00000024438
VGNC:
24507
LinkDB
All DBs
Position
20:24665438..24682424
Genome browser
AA seq
464 aa
AA seq
DB search
MASSGNAKKMREEATCSICLNLMVEPVSVSCGHSYCHLCIVRFIENVRLLQPWLGTFSCP
QCRATFQMASLRPNKQLGTLIEAIREMEHEMSCEEHGEKLHLFCEDEGQLICWRCERTPQ
HKGHTTALVEDVCQGYKEKLQEAVTKLRQLEEECMNLKVFTEKQITEWNEKINIQRQKIQ
SEFKNLQSFLHEEEKCYLWRLEKEKEQILRRLRDNEANLGRKSHELESHILELEAKCQGS
AQNLLQDVKDTLSRSWAVKLETPEALSMEVHTVCHVSELYFDVKKMLRRYQVSVTLDPDT
AHHELILSEDRRQVTRGCPQEKLDTSRRFTALPCILGCEGFTSGKHYFEVDVGEGTGWDL
GLCMENVQRDIGMMRTPQSGFWAIRLCKKKGYVALTSPLTSLHLKEQPLVVGVFLDYEAG
VVSFYNITTGSHIFTFPGTSFSDTLRPYFQVYQYSPLFLPSPNE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatccggaaacgccaagaagatgagggaggaagccacctgctccatctgcctg
aacctgatggttgagcccgtgagcgtcagctgtggacacagctactgccacttatgcata
gtacgcttcattgagaacgtacgcctcttgcaaccatggctggggacattctcctgtccc
cagtgtcgggctacatttcaaatggcaagcctccggcccaacaagcagctgggaaccctc
attgaagccatcagggagatggagcatgaaatgtcatgtgaggaacacggagagaagctc
cacctgttctgcgaagacgagggccagctcatctgctggcgctgtgaacggacaccacag
cacaaaggacacaccacagctcttgttgaagatgtatgccaaggctacaaggaaaagctc
caggaagctgtgacaaaattgaggcaactggaagaggaatgtatgaatctgaaggtgttc
acagaaaagcaaataaccgaatggaatgagaagataaacattcagagacaaaaaatccag
tctgaatttaagaatctccagagcttcctgcatgaggaggagaaatgttacctatggagg
ctggagaaagaaaaagagcagattctgaggagactgagggacaatgaggccaatctggga
cggaaaagccatgaacttgagagccacatcctggaactagaggcaaaatgtcagggctca
gcccagaatttgctgcaggatgtgaaagacactttgagcaggagttgggctgtgaagctg
gaaacaccagaggccctctctatggaggttcatactgtgtgccatgtttctgagctttac
tttgatgtgaagaaaatgttaaggcgctatcaagtcagtgtgactctggatccagataca
gctcatcatgaactaattctgtctgaggatcggagacaagtgactcgtggatgcccccag
gagaagcttgacacttccaggagatttactgccttgccctgtatcctgggctgcgagggc
ttcacctcaggaaaacattactttgaagtggatgtgggagaaggaactgggtgggattta
ggactttgtatggaaaacgtgcagagggacattggcatgatgcggacgcctcagtctgga
ttctgggccatcaggctgtgcaaaaagaaaggctatgttgctcttacctctcccctaact
tcccttcatctgaaagagcagcctctggtggtgggggtttttctggactatgaggccgga
gttgtatccttttacaacataactactggctcccacatcttcaccttcccagggacctcc
ttctctgatactctccggccctatttccaggtttatcaatattctcctttgttcctgcct
tccccgaatgagtaa
DBGET
integrated database retrieval system
