Equus caballus (horse): 100052986
Help
Entry
100052986 CDS
T01058
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X2
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb05014
Amyotrophic lateral sclerosis
ecb05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100052986 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100052986 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100052986 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100052986 (NUP98)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100052986 (NUP98)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100052986 (NUP98)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100052986 (NUP98)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
100052986
NCBI-ProteinID:
XP_014597184
Ensembl:
ENSECAG00000015336
VGNC:
20977
LinkDB
All DBs
Position
7:complement(73869099..73975202)
Genome browser
AA seq
1800 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQSQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFGKPFAQAITTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGFGTNTSGNSIFGNKAGPGTLGTGLGAGF
GTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFGAPLAPVALTDPNASAAQ
QAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVNRD
SEDLASPSDYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYTNPIAKPIPQTPESAGNK
HNSSSSVDDTIVALNMRAALRNGLEGSSEETSFHEESLQDDREEIENNTYHMHPAGIVLT
KVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRK
EVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSR
KQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTSTKKLKTAPLPPAGQATP
FQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDSVLEESVPEDQEPVSAS
THIASSLGINPHVLQIMKASLLADEEDVDTVLDQRFSRLPSKADTSQEICSPRLPISASH
SSKSRSLVGGLLQSKFTSGAFLPPSASVQECRTPRASSLMNIPSTSPWSVPPTLTSVFSV
PSPAPEVQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSG
EQLSGSHELENHQIADSMEYGFLPNPVAVKSLTESPFKVHLEKLSLRQKKPDEDLQLYQT
PLELKLKHSTVHVDELCPLVVPNPGVAVIHDYADWVKEASGDLLEAQIVKHWSLTWTLCE
ALWGHLKELDSQLDEPSEYIQILERRRAFSRWLSQTAAPQIEEEVSLTRKDNPVEAVFSY
LTGKRISEACSLAQQSGDHRLALLLSQLVGSQSIRELLTMQLVDWHQLQADCFIQDERLR
IFALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTASISTALSMYEEAFQNTS
EGDRYACSPLPSYLEGSGCVLEEEQDSRRPLQDVCFHLLKLYSDRHYDLNQLLEPRSITA
DPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSSM
REKAVRELLTRHCQLLETPESWAKETFLTQKLCVPAEWIHEAKAVRAHMESDKHLEALYL
FKAGHWNRCHKLVIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYI
QVIEMLHHVQQVDCTGYELEQLHTKVTSLCNRIEQIQCYNAKDRLAQSDMAKRVANLLRV
VLSLQHAPDTTSDSTPDPQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacaccctttgggggtggcacaggtggctttggcacaact
tcaacatttgggcagaatactggcttcggcactactagtggaggggcatttggaacatct
gcatttggttctagcaataatactggaggcctgtttggaaattcacagaccaaaccagga
ggattatttggtaccaattcatttagccagccagctacctccacgagcactggctttggg
tttggcacatcaacaggaacatcaaatagcttgtttggaactgcaagcacagggaccagt
ctcttctcatcccaaaacaatgcctttgcacaaaataaaccaactggctttgggaatttt
ggaacaagtactagcagtgggggactgtttggaactacgaataccacctccaatcctttt
ggtagcacatcaggctccctctttgggccaagtagttttacagctgctcctactgggact
actattaagtttaatcctccaactggtacagatactatggttaaagctggagttagcact
aatatcagtacaaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcacta
gaggaacttcgtttagaggattatcaagctaaccggaaaggcccacagagccaggtggga
gcaggtaccacgactggcttgtttgggtcttctccagccacctccagtgcaacaggactc
ttcagctcctccaccactaattcaggctttgcctatggtcagaacaaaacagcctttgga
actagtacaactggatttggaacaaatcccggtggtctctttggccaacagaatcagcag
actaccagcctcttcggcaaaccatttgcccaggccataaccacccagaacactggcttt
tcctttggcaataccagcacactaggacagccgagcaccaacaccatgggtttatttgga
gtaacccaagcctcgcagcctggaggtctttttgggacagctacaaacaccagcactggg
acagcatttggaacaggaacaggcctctttgggcagaccaatactggatttggtgctgtt
ggttcgaccctgtttggcaataacaagcttactacatttggaaccagcacaaccagtgct
ccttcatttggtacaaccagtggcgggctctttggttttggcacaaataccagtgggaat
agtatttttggaaataaagcaggacctgggactctgggaactgggcttggtgcaggattt
ggaacagctcttggtgctggacaggcatctttgtttgggaacaaccagcctaagatcgga
gggcctcttggtacaggagcctttggggcccctggatttaatactacgacagccactttg
ggctttggagcccccctggccccagtagctttgacagatccaaatgcttctgctgcccag
caggctgttctccaacagcacatcaatagtctaacgtactcaccttttggagactctcct
ctcttccggaatcccatgtcagaccctaagaagaaagaagaaagattgaaaccgacaaat
ccagcagcccagaaagctctcactacacccactcattataaactgacacctcgccctgcc
accagagtccgaccaaaggctttacaaacaacaggtacagccaagtcacatctctttgat
gggctggatgacgatgaaccatccttagcgaatggagcgttcatgcccaagaagagcatt
aagaagttggttttgaaaaaccttaacaatagcaatctcttctctcctgttaatcgtgat
tcagaagatctagcttcaccatctgattatccagaaaatggagagagattcagtttcctg
agcaaacctgttgatgagaaccatcagcaggatggagatgatgattctcttgtgtcacgt
ttttatactaaccctattgccaaacccattcctcaaaccccagagagtgctggaaataaa
cacaacagcagcagcagtgtggatgataccatcgttgcattaaacatgcgtgctgcctta
cgaaatggactggaaggaagcagtgaagagacctcttttcatgaggagtctctgcaggat
gatcgagaagaaatagaaaataatacttaccatatgcacccggcaggcattgttctcact
aaggttggttactatacaattccatctatggatgaccttgctaaaattaccaatgaaaaa
ggagagtgcattgtttctgacttcactatcggtcgtaaaggttacggttcaatctatttt
gaaggagatgtgaatttgacaaatctaaatttggatgatattgtgcatatccgaaggaaa
gaagtaattgtctacttagatgataaccagaaaccacctgtgggtgaagggctaaatagg
aaggctgaagttacgttggacggagtttggccaacagataaaacatctcgttgtttaata
aaaagcccagatcgacttgccgatatcaactatgagggaagattggaagcagtttcaagg
aaacagggagctcagttcaaagagtaccgtcctgaaacgggttcttgggtgtttaaggtc
tcccatttttctaagtatggccttcaggattctgatgaagaggaggaggaacggccatcc
aaaactagtacaaaaaagttgaagactgcccctttgcctcctgcaggccaggccacacca
ttccagatggctcttaatggcaaaccagcacctccaccccagagccagagcccagaggtg
gaacagttagggagggttgtggaactggacagtgacatggtagatatcacccaggagcca
gttttggattccgtgttagaagagagcgtgcctgaggatcaggaacctgtatccgcctca
acacacattgcatcttcactgggaattaatccacatgtcttacagatcatgaaagcatca
ttgcttgctgatgaagaagatgtagatacggtcctggatcaacgcttcagtcgccttcct
tctaaagcagatacatctcaagaaatctgttctcccagactccccatttcagcatcccac
tcatcaaaatcccgttcattagttggtgggttactacaatcaaaatttacaagtggagct
tttcttccaccaagtgcctctgtgcaagaatgtcgcactcccagagcatcgtctttgatg
aatatcccatccacatccccttggtctgtccctccaaccctgacctctgtgttttcagtg
cccagcccagctcctgaggttcagttgaaaacagtgggtacacgcagacaaccaggccta
gtacctcttgaaaagtctgtcacctatggcaagggcaaactcttgatggacatggcccta
tttatgggacgctcatttcgagttggttggggccccaactggactcttgctaatagcgga
gaacagctgagtggctctcatgaactggaaaatcatcagattgctgattctatggaatat
ggattcctgcctaatcctgtagctgttaaatccctaactgagtccccattcaaagttcat
ttggaaaagctaagtttgagacaaaagaagccagatgaagacctgcaattataccagacc
cctctggagctcaaattgaaacatagcactgtccacgtggatgagctgtgtcctctcgtt
gtccccaatccaggagttgctgtcattcatgactatgcagactgggttaaggaagcatca
ggagacttactggaagcacaaattgtgaagcactggagccttacatggacattatgtgaa
gctctgtggggccacctgaaggagcttgacagccagctggatgaacccagtgaatacatt
cagattctggagcgaagaagagctttctctcgctggctatctcagactgctgcacctcag
attgaggaggaagtctctttaacccgaaaagacaaccctgtggaagctgtcttcagctac
ctcacgggcaagaggatcagtgaggcctgctctctggcccagcagtcaggtgatcatcgt
cttgcccttcttttatcccagttggtggggagccagtcgatccgggagctgcttactatg
cagctggtcgattggcatcagctccaggctgattgcttcatccaggatgagagactgcgc
atctttgccctgttggctggaaaaccggtgtggcagctctcagagcagaagcaaatcaat
gtgtgctcccagttagactggaaacgctccctggctgtccatctttggtatttgcttcca
ccaacagcttccatttccacggcactcagcatgtatgaagaagcatttcagaatacctct
gagggtgacagatatgcctgctccccacttccttcatacttggagggctctggctgtgtg
ttagaggaggagcaagattcacggagaccacttcaggacgtctgctttcaccttctaaaa
ctctacagtgacagacattatgatcttaatcagctcctggagcctcgaagcataacagca
gatcctttggactaccgcctaagctggcacttgtgggaggtgctgagggctcttaactac
acccacctctcagagcagtgtgagggtgtgctgcaggccagttatgctggccaactggaa
agtgaggggctctgggagtgggccatctttgtcctcctgcacattgacaactcaagcatg
cgtgagaaggctgttcgagagctgcttacccgacactgccaactattggagacccctgaa
tcttgggctaaggagactttcctgacccagaagctttgtgtgcctgctgagtggatccat
gaggccaaagcggtgcgagcacacatggagtccgacaagcacttggaggccctctattta
tttaaagctgggcactggaaccgttgccacaaactcgtcatcaggcacttagcttctgat
gccatcattaatgagaactatgactacctgaaggggttcttggaagacctggcacctcca
gagcgcagcagcctgattcaggactgggaaacatctgggcttgtttacctggactatatt
caggtcattgaaatgctccaccatgtacagcaggtggattgcacaggttatgagctggag
cagttacacaccaaagtgacctctctgtgcaaccggatagagcagatccagtgctacaat
gccaaggaccgcctggctcaatcagacatggccaaacgtgtagccaacctactacgtgtg
gtactgagccttcagcatgcccctgatacaacatctgactcaacaccagatcctcagcga
gttcctttgcgcctgttggctccccacattggccggcttcccatgcctgaggactatgcc
ttggaggaactgcgcagcctcacacagtcctacctgcgagaactgactgttgggagccag
tga
DBGET
integrated database retrieval system
