Equus caballus (horse): 100053098
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Entry
100053098 CDS
T01058
Symbol
CNTN6
Name
(RefSeq) contactin-6 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecb04515
]
100053098 (CNTN6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ecb00537
]
100053098 (CNTN6)
Cell adhesion molecules [BR:
ecb04515
]
Immunoglobulin superfamily
Contactins
100053098 (CNTN6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ecb00537
]
Others
100053098 (CNTN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Sp38
Ig_5
Pur_ac_phosph_N
C2-set_2
V-set_CD47
C2-set_3
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
100053098
NCBI-ProteinID:
XP_014586938
Ensembl:
ENSECAG00000015975
VGNC:
16699
UniProt:
F6YXT5
LinkDB
All DBs
Position
16:complement(15738672..16034285)
Genome browser
AA seq
1029 aa
AA seq
DB search
MRLLWKLVILLPLINTCAGDSRLSRPIFTQEPQDVIFPLELSNSEIILNCAADGYPSPHY
RWKQNGRDIDFTMSYHYRLDGGSLAISSPQTDQDIGTYQCLATNPLGTILSRKAKLQFAY
IEDFETKTRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGN
LYIAKVEPSDVGNYTCFITNKEAQKSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETIQAA
KGSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAG
NLRGRNLAKGQLIFYALPEWEQKIQNTYLSIYDSLLWECKARGKPNPWYTWLKNGERLSP
EERIQIENGTLIITMLNLSDSGVYQCAAENKYQIIYANAELRVLASAPDFSKNPIKKNSV
VQVGGDIAIECKPIAFPRAAISWKRRAESLKQSKRVSLLEDGSLKIYNVTRSDAGSYTCI
ATNQFGVARNTGSLVVKERTIITLPPSKMDVTVGESIVLPCQVSHDPSIEVVFVWSFNGD
VIDLKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTTLESLSAAADIIVRGPPGP
PDDVRVEHISSTTSQLSWRPGSDNNSPIQIFTVQARTPFSVGWQAVSTVPEILSGKTYNA
TVVGLSPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPVVAPTNINGGGGSRSELVIT
WESIPEELQNGEEFGYIIMLRPVGSTTWIKERVPSVESSRFVYRNESIIPLSPFEVKVGV
YNKEGEGSLSTVSIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEV
LYWTDDSKESMIGKTRVSGNVTTKNITGLKANTVYFASVRAYNTAGTGPSSPPVNVTTKK
SPPSQPPANIAWKLTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHILETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSRGFPVSEPRVHFLSVIMIFYC
LLFSHLNNE
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatggaaactggtaattctgctgccactcataaatacttgtgcaggtgat
agtcgtttgagccgtcctatttttacccaggagccacaagatgtcatttttcctttggaa
ttatcaaactctgaaatcatcctgaattgtgctgctgatggttacccttcacctcattat
aggtggaagcaaaacggcagagatattgattttaccatgagttatcactacaggttggat
ggaggcagtttggcaatcagtagcccccaaacagatcaagatattggcacataccagtgc
ctggccaccaaccctctggggacgattctgagtcggaaggcgaagctccaatttgcatat
attgaagactttgaaaccaaaacaagaagcactgtgtctgtccgagaaggtcaaggtgtg
gtgcttctctgtggcccgccaccacattttggagatttatcttatgcatggaccttcaat
gataaccccttatatgtccaagaggacaacaggcggtttgtgtcacaagagacaggaaat
ttgtatattgccaaagtggagccatcagatgtgggcaactacacttgcttcataacaaac
aaggaagcccagaaaagcgttcaaggaccacccactccattagtgcagcgcactgatggt
gtgatgggggaatatgaaccaaagattgaagtgcgttttcctgaaactatacaagctgca
aagggttcatcggtaaaactggaatgctttgcccttggaaatccagtccccgatattagt
tggaggaggttggatggaagcccgttgccagggaaagtcaagtacagcaaatcccaggct
atccttgaaatcccgaactttcaacaggaagatgaaggcttctacgaatgcattgcaggc
aaccttcgaggaagaaaccttgcaaagggtcaactcattttctacgcccttccagaatgg
gaacaaaaaattcaaaatacatacctgtctatctatgacagcttgctttgggaatgcaaa
gctagaggaaagccaaacccttggtacacgtggttaaagaatggggagcgcctcagtcca
gaggaaagaattcaaatagaaaatggaacacttatcataactatgctgaatctgtcagat
tctggtgtctaccaatgcgccgcagaaaacaaatatcagataatttatgcaaatgcagaa
ttgagagtattggcctcagctcctgatttctccaaaaatcccattaaaaaaaattcagtt
gttcaagttggtggggatattgctatcgaatgcaaaccaattgcttttcctagggcagct
atctcctggaaaagacgagcggagagcctgaagcagagcaaaagagtgagtctcttggag
gatggcagcctcaagatatataacgttaccaggtcagatgccggatcatatacttgcata
gctacaaatcagtttggtgttgcgaggaacactggcagcctagtcgtaaaagagaggact
attattacccttccaccttccaaaatggatgttacagttggcgagagtatagtcctacca
tgccaggtgtcccatgacccctccattgaagttgtatttgtgtggtctttcaatggagat
gtcatagacttaaaaaaaggagtggctcattttgaaaggattggaggagaatctgttggg
gatttgatgataaggaatattcagttaaatcattctggaaaatatctatgcacagtaaaa
acaactctagaaagtttatctgctgcggctgatatcattgttagaggtcccccaggtccc
cctgatgatgtgagagtggaacatatctccagtactacttctcaactaagctggagacca
ggttcagataataacagtcccattcaaatatttacggttcaagctcggacaccattttct
gtgggttggcaagctgtttctacagttccagaaattctcagtggtaagacatacaatgca
acagtggttggtttgagtccttgggtcgaatatgaatttcgtgttgttgctgggaacagc
attgggattggagaaccaagtaaaccatcagaattgttaagaaccaaagcatcagtcccg
gtcgtggcaccaacaaatatcaatggaggtggaggaagtcggtctgaactcgtcattacg
tgggagtcaattccagaagaactacagaatggagaggaatttggatacatcatcatgttg
cggccagttggctcaacaacctggatcaaggaaagagtgccatctgtggaatcatcaagg
tttgtttacagaaacgaaagcatcatccccctctctccctttgaagtcaaagtgggtgtg
tacaataaggaaggagaaggatcactgagtaccgtgtccattgtctactctggggaagac
gaacctcagctagcaccaaggggaacttctgtccaaagtttttctgcttcagaaatggag
gtttcgtggaatgctattgcctggaatagaaacactggaagagtgctgggctatgaggtc
ttatactggacagatgactccaaggaatccatgattggtaaaactagagtgagcggaaat
gtcacaaccaaaaacatcacagggctgaaagctaacactgtctactttgcttccgtgaga
gcttacaacactgctgggacagggccctcaagccccccagtcaacgttaccaccaaaaag
tctcctccaagccaaccaccagctaacattgcctggaagctgacaaactctaaattatgc
ctaaactgggagcatgtaaaaaccatggaaaatgagtctgaagtattgggttacaagatt
ctgtaccggcaaaacagacagagtaaaactcatattttggaaacaaacaatacatcagct
gagcttctggttccatttgaagaggactatttgattgaaataagaacagttagtgatggt
ggagatggaagcagcagtgaggaaattaggattccaaaaatgtcaagtttgagttccaga
gggtttccagtctcagaacctagagtccatttcctgtctgtcatcatgattttttactgt
ttgctattcagccacttaaacaatgaataa
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integrated database retrieval system
