Equus caballus (horse): 100053412
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Entry
100053412 CDS
T01058
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ecb
Equus caballus (horse)
Pathway
ecb04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100053412 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100053412 (SMARCAD1)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100053412 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
ERCC3_RAD25_C
CUE
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
100053412
NCBI-ProteinID:
XP_005608671
Ensembl:
ENSECAG00000011562
VGNC:
23321
LinkDB
All DBs
Position
3:complement(45203466..45283207)
Genome browser
AA seq
1028 aa
AA seq
DB search
MNLFNLDRFRFEKRSKVEEAPEATPQLSQPGPSSPISLSAEEENAEGEVSRAGTPDSDIT
EKTEDSSVPETPENERKASISYLKNQRGIQYIDLSSDSEDVISPNCSSTVQEKKFNRDTV
IIVSEPSEDEESQGLPAMAGRNNNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLK
LIESTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPYEEDEFNDDQSIKKKRLDHGEE
SNESAESSSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDM
QYASQSEFPNGKEVSSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDS
EYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITEL
RPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTG
NGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPF
ILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTEMCNVMMQL
RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR
HINNFQLDMDLILDSGKFRVLGRILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL
RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIAT
LLKTSMGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacctggaccgttttcgctttgagaaaaggagtaaggttgaggaagcg
cccgaagcaacccctcagctctcccagcctggcccttcttcacccatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacccctgattcagatataact
gaaaaaacagaagattctagtgttccagaaactccagaaaatgagagaaaagcaagtata
tcatatttaaagaatcaaagaggaatccagtatattgatttgtcttctgatagtgaagat
gttatttccccaaattgctctagtacagttcaagagaaaaaattcaacagagacacagtg
attatagtttctgaaccttctgaagatgaagagtcccaaggccttcctgccatggcaggt
agaaataataatgatatttcagaattggaagacctttcggaattggaagaccttaaagat
gctaagcttcagaccttgaaggagctttttccacaaagaagtgacagtgatttgcttaag
ttgattgaatcaacaagcactatggatggagcaattgctgctgccttgctgatgtttggt
gatgcagaaggtggtggacccaggaaaagaaaattatcttcttcttcagagccgtatgag
gaagatgaatttaatgatgatcaatctataaaaaagaaaagactggatcatggagaggaa
tcaaatgagtctgcagaatctagcagtaattgggaaaagcaggaaagtattgtattgaaa
ttacaaaaggaatttcccaattttgataagcaggaactaagggaagtactcaaagaacat
gaatggatgtacacagaagctttagaatctttaaaagtattcgcagaagaccaagatatg
caatatgcttcacaaagtgagtttccaaatggaaaagaagtttcttcaagaagtcaaaat
tatcctaaaaatgcagctaaaacaaaactgaaacagaaatgttccatgaaaccacaaaat
ggttttaacaagaaacgtaaaaaaaatgtatttaatcctaagagagttattgaagattct
gaatatgattcaggttctgatgtcggtagttcactagatgaggactatagtagtggtgaa
gaagtgatggaggatggctataaaggtaaaatacttcacttccttcaagatgcttcaatt
ggtgaacttactttgattcctcagtgttctcagaaaaaggctcagaagataacagagctc
cggccctttaatagttgggaagctctgttcacaaagatgtccaaaactaatggcttatca
gaagatttgatatggcactgtaaaacactgatccaagaaagggatgtagttataaggctt
atgaacaaatgtgaagacatttcaaataaattgacaaaacaagttaccatgctcactgga
aatggaggtggatggaacatagaacaaccctccattctaaaccaaagtttgtcactcaag
ccctatcagaaggttggtttgaattggctggcgctggtacataaacatggacttaatggc
attttggcggatgaaatgggcctaggaaaaactattcaagccattgcattcctggcatac
ctctatcaggagggtaataaaggtcctcatttgatcgttgttccagcatcaactatagat
aactggttaagagaagttaatttatggtgccccactttaaaggtgctctgttactatggt
tctcaagaagagcgtaaacagattaggtataacattcatagtaaatatgaagaatacaat
gtaattgtgaccacgtataattgtgcaatcagcagttccgatgaccgtagtctatttcga
cggctgaaacttaattatgcaatttttgatgagggccatatgctgaagaatatgggctcc
atccgataccagcaccttatgacgattaacgcaaataatcgtctgctactcacaggcaca
cctgtccagaataatctgttagaacttatgtcgctgttgaattttgttatgccacacatg
tttagtagtagcaccagtgaaatacgaagaatgttttcttctaagacaaaatcagcagat
gagcaaagtatttatgaaaaggagagaatagcacatgcaaaacaaattataaaaccattt
attctcagaagagtaaaagaagaggttctcaagcagctgccccccaagaaggatcaaatc
gagctgtgtgcaatgtcagagaagcaggagcaactctatttgggtctcttcaacagattg
aaaaaatctatcaataacatggaaaaaaacacagaaatgtgcaatgtcatgatgcaattg
agaaaaatggccaatcatcctttattacatcgccaatattacacagctgaaaaactcaag
gaaatgtctcagcttatgctaaaggaacctacacattgtgaggctaacccagacctgatc
tttgaagatatggaagttatgacagactttgaattacatgtactttgtaaacagtatcga
cacattaataacttccagttagacatggacttgattttagattctggaaaattccgagtt
ttaggccgcatcttgtctgaattaaaacagaagggcgatagggttgtattatttagccag
tttaccatgatgctggatattttagaggttctcttaaaacatcatcagcatagatacctc
agattagatggaaagactcagatttctgaaaggattcatctaattgatgagttcaatacc
gatatggatatctttgtgtttctgctgtcaacaaaagctggtggtctaggaataaacctg
acttcagcaaatgttgttatacttcacgatattgactgtaatccttacaatgacaaacaa
gcagaagatagatgccatagagtaggccagactaaagaagtactagttataaaattaata
agccaagggacgatcgaagaatccatgctaaaaattaaccaacagaaattgaaactagaa
caagatatgaccacagtagacgaaggtgacgaagggagtatgcccgcagatatagccacg
ttactaaagacgtcaatgggcctgtga
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