Equus caballus (horse): 100053719
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Entry
100053719 CDS
T01058
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X2
KO
K05236
coatomer subunit alpha
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100053719 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecb04147
]
100053719 (COPA)
Membrane trafficking [BR:
ecb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100053719 (COPA)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100053719 (COPA)
Exosomal proteins of bladder cancer cells
100053719 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
100053719
NCBI-ProteinID:
XP_001914764
Ensembl:
ENSECAG00000021818
VGNC:
16767
LinkDB
All DBs
Position
5:33628856..33668375
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATEGLGDDVLGKGQEEGGGWDVEEDLELPPELDIPPGAAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttaaccaaattcgagaccaagagcgcgcgggttaaagggctcagttttcaccctaaa
agaccttggatcctgaccagtttacacaatggggtcatccagttatgggactatcggatg
tgtaccctcatcgacaagtttgatgaacatgatggtccagtacgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgactataagattaaggtttggaattac
aagcttcggcgctgtctcttcacattgcttgggcacctagactacatccgcaccaccttt
tttcatcatgaatatccatggattctgagtgcctcagatgatcagaccatccgagtatgg
aactggcagtctaggacctgtgtctgtgtattaacggggcacaaccattatgtaatgtgt
gctcagttccacccctcagaagacctggttgtatcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacttgtcccctggtgcagtggagtcggat
gtgagaggaataactggggttgatctgtttggaactacagacgcagtggtgaagcatgtt
ttggagggtcatgatcgtggagtaaactgggctgccttccatcccactatgccccttatt
gtatctggggccgatgaccgtcaagtgaagatctggcgcatgaatgaatcaaaggcatgg
gaggttgatacctgtcggggccattataacaatgtgtcttgtgctgtcttccaccctcgc
caagagttgatcctcagcaattctgaggacaagagtatccgagtctgggatatgtctaag
cggactggggttcagaccttccgcagggaccatgatcgtttctgggtcctagctgcccac
cccaaccttaacctctttgcagcaggccatgatggtggcatgattgtgtttaaactggaa
cgggaacggccagcctatgctgttcatggcaatatgctgcattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtggctgtgatgcagttgcggagtggt
tccaagtttccagtgttcaatatgtcgtacaatccagcagaaaatgccgtcctactgtgt
acgagagccagcaatttagagaatagtacctatgacctgtacaccatccccaaggatgct
gactcccagaatcctgatgctcctgaagggaaacggtcctcaggcctgacagccgtttgg
gttgctcgaaatcgatttgctgtcttagatcggatgcattcgcttctgatcaagaatcta
aagaatgagattactaaaaaggtacaggtgcccaattgtgatgagatcttttacgctggc
actggcaacctcctgcttcgagacgcagaatccatcacactcttcgatgtacagcagaag
cggactctggcatctgtgaagatttccaaggtgaaatatgttatttggtcagcagacatg
tcccatgtagcactactggccaaacatgccattgtgatctgtaaccgcaaactggaggct
ctatgtaacattcatgagaacattcgtgtcaagagtggggcctgggatgagagtggggtg
tttatctataccacaagcaaccacatcaaatatgccgtcaccacaggggactatgggatc
atccgaactctggatttacccatctatgtcacacgagtgaagggcaacaatgtatattgc
ctagatagggagtgtcgtcctcgggtgctcaccattgatcctactgagttcaagttcaag
ctggccctgatcaacagaaaatatgatgaggtactacacatggtgaggaatgccaaacta
gtaggccagtctatcattgcttatctccagaagaagggctatcctgaggtggcactgcat
ttcgtcaaggatgagaaaactcgctttagtctggcactggagtgtgggaacattgagatt
gctctggaagcagccaaagcactggatgacaagaactgctgggagaagctgggagaagta
gctttgctacaggggaaccaccagattgtggaaatgtgttatcagcgcaccaaaaacttt
gataaactttccttcctataccttattactggcaacttagagaaacttcgcaagatgatg
aagattgctgagatccgaaaggacatgagtggccattatcagaatgccctatacctggga
gacgtgtcagagcgagtacggatcctgaagaactgtggccagaaatcactggcctatctc
acagctgctacccatggcttagatgaagaagctgagagcctgaaggagacatttgatcca
gagaaggagacaatcccagacattgaccctaatgccaagctgctccagccacctgcacct
atcatgccattggataccaattggcccttattgactgtgtccaaagggttctttgaaggg
accattgccagcaaggggaagggaggagcactggctgctgacattgacattgacactgtt
ggtactgagggctggggagaggatgcagagctgcagctggatgaagatggatttgtggag
gctacagaaggtttgggagatgatgttcttggcaagggacaggaagaaggaggtggctgg
gatgtagaagaagatctggagctccctcctgagctggatataccccctggggcagctggt
ggagctgaggatggattctttgtgcctcccaccaagggaaccagtccaactcagatctgg
tgcaacaactctcagcttccagttgatcacatcctggcaggctcttttgaaacagccatg
cggctccttcatgaccaggtgggggtcacccaatttggcccctacaaacagctgttccta
cagacctatgcccgaggccgaaccacctatcaggctctgccctgcctgccctccatgtat
ggctaccctaatcgcaattggaaggatgcagggctgaagaatggagtacctgcagtgggc
ctgaagcttaatgacctcatccaacggttgcaactgtgctaccagctcaccacagttggc
aaatttgaggaggctgtggaaaaattccgttccattttacttagtgtgccacttcttgtt
gtggacaacaaacaggagattgcagaggcccagcagctcatcaccatttgtcgtgagtac
attgtgggtttgtccatggagatagaaaggaagaagctgcccaaagagactctggaacag
cagaagcgaatctgtgaaatggcagcctatttcacccactcaaacctgcagcctgtgcac
atgatcctggtgttgcgtacagctctcaacctgttcttcaagctcaagaactttaagaca
gctgccacctttgctcggcgcctgttggaacttgggcccaagccagaggtggctcaacag
acacgcaaaatcctgtcagcctgtgagaaaaaccccacggatgcctatcagctcaattat
gacatgcacaacccttttgacatctgtgctgcatcttatcggcccatctaccgtggaaag
ccagtggagaaatgtccactcagtggggcctgctattccccggagttcaagggtcaaatc
tgcagagtcactacagtgacagagattggcaaagatgtgattggtttaagaatcagtcct
ctgcagtttcgttaa
DBGET
integrated database retrieval system
