Equus caballus (horse): 100054140
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Entry
100054140 CDS
T01058
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100054140 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100054140 (DHX36)
03012 Translation factors [BR:
ecb03012
]
100054140 (DHX36)
Enzymes [BR:
ecb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100054140 (DHX36)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100054140 (DHX36)
Translation factors [BR:
ecb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100054140 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
PhoH
NPHP3_N
AAA_23
AAA_25
Motif
Other DBs
NCBI-GeneID:
100054140
NCBI-ProteinID:
XP_023476912
Ensembl:
ENSECAG00000025100
VGNC:
17177
LinkDB
All DBs
Position
16:complement(87685682..87736053)
Genome browser
AA seq
995 aa
AA seq
DB search
MSYEGPPGWGRDGGPRSSGGGRGGSRGAGGGGGGRGGRGRHPGHLKGREIGLWYARKQGQ
KNRDAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSEAQISWFAPEDHGYGTEAPAKN
KPNSEKKREDQEKKLINQEKQTFRIRDRYIDRDSEYLFQENEPDATLDQQLLEDLQKKKT
DRRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNCIERGK
GSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTG
IILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKGLLNFRPDLKVILMSATLNAEK
FSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKRGFMQGHVNRQEKE
EKEAIYKERWPDYVKELRKRYSASTVGVMEMMDDDKVDLNLIAALIRYIVLKEEDGAILV
FLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNI
AETSITIDDVVFVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRRGRAGRVQPGHCYH
LYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIACFLSRLMDPPSDEAVSLSIKH
LMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVI
PLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRHEKDYCWEYFLSSNTLQM
LHNMKGQFAEHLLGAGFVSSRDPKDPESNVNSDNEKIIKAVICAGLYPKVAKLRLNLGKK
RKMVKVYTKTDGLVALHPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFF
GGDISIQKDKDQETIAVDEWIVFQSPARIAYLVKELRKELDILLQEKIESPRPVDWKDTE
SRDCAVLSAITDLIKTQEEAAPRSFPPRLQDGYYS
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgagggccctccgggctggggccgcgacggcgggccgcgcagctccggcggc
ggccgcggtgggagccggggcgcgggcggcggcgggggcggccggggcgggcgcggccgg
caccccgggcacctgaagggccgcgagatcggcctgtggtacgcacggaagcagggccag
aagaaccgggacgccgagaggcaggagagagctgtagtacacatggatgaacgtcgagaa
gaacaaattgtgcagctactgcattctgtccaagctaagaatgataaggattcggaagca
cagatatcctggtttgctcctgaagatcatggatatggtactgaagctcctgctaagaac
aaaccaaactcagagaagaaacgggaggaccaggaaaagaaattgataaatcaagaaaag
cagacgtttagaatcagggacagatacattgaccgagattctgaatatctcttccaagaa
aatgagccagatgcaaccttagaccaacaattattggaagatttacaaaagaaaaaaact
gaccgtcgctatattgaaatgcagcatttcagggaaaagctgccttcgtatggaatgcaa
aaggaattggtaaatatgatcgataaccatcaggtaacagtaataagtggtgaaactggt
tgtggaaaaaccactcaagttactcagttcattttggataactgcattgaaagagggaaa
ggatctgcatgcagaatagtttgtacacagccaagaaggattagtgccatttcagtcgca
gagcgagtagctgcagaaagggcagagtcttgtggcaacggtaatagtaccggataccaa
attcgtctccagagtcggttgccaaggaaacagggttctatcttatactgtacaacagga
atcatccttcagtggctccagtcagacccgcatctgtccagtgttagtcatattgtgctt
gatgaaatccatgagagaaatctacagtcagacgttttaatgactgttgttaaaggtctt
ctcaattttcgacctgacctcaaagtaatactgatgagtgcaacattgaatgctgagaaa
ttttcagaatattttggtaactgtccaatgatacacatacctggttttacttttcctgtt
gtggagtatcttttggaagatataattgaaaaaataagatatgttccagaacaaaaagaa
cacagatcacagtttaagaggggtttcatgcaagggcatgtaaatagacaagaaaaagaa
gaaaaagaagcaatctataaagaacgctggccagactatgtaaaggaactgcgaaaaagg
tattctgcaagtactgtaggtgttatggaaatgatggatgatgataaagttgatctgaat
ttgattgctgcccttattcgttacattgttttgaaagaagaggatggtgcaatactggtc
tttctaccaggctgggacaatatcagtactttacatgacctcttgatgtcgcaagtgatg
tttaaatcagacaagtttcttattatacctttacattcactgatgcctacagttaaccag
acacaggtatttaaaagaacccctcctggtgttcggaaaatagtaattgctaccaacatt
gcagagactagcattaccatagatgatgtagtttttgtgatagatggaggaaaaataaag
gagacacactttgacacacagaacaacatcagcacgatgtccgctgagtgggttagcaag
gccaacgccaagcagaggagaggtcgggctggaagagttcaacctggtcactgctatcat
ctgtacaatggtcttagagcaagccttctggatgactatcaactgccggaaattttgaga
acccctttggaagagctgtgtttacaaataaagatcttaagactaggtggaattgcctgt
tttctgagtaggttaatggacccgccatctgatgaagccgtgtcactctccataaaacac
ctgatggaactgaacgctttggataaacaagaagaattgacgcctcttggagtccattta
gcacggttaccagttgagccacacattggaaaaatgattctgtttggagctctgttctgt
tgcctagacccagtgctcaccatagctgccagtctcagcttcaaagatccctttgtcatt
ccattgggaaaagaaaagatcgcagatgcaagaagaaaagaattggcaaaggatactaaa
agtgaccacttgactgttgtgaatgcatttgagggctgggaggaagctagacgacgtggt
ttcagacatgaaaaagactattgctgggagtattttctgtcttcaaacactctgcagatg
ctgcataacatgaaggggcagtttgctgagcacctgctgggagctggctttgtgagcagt
cgagatcccaaagatcccgagtctaatgtcaattcagataatgagaagataattaaggct
gtcatctgtgctggtttatatcccaaagttgctaaactccgactaaatttgggtaaaaaa
agaaaaatggtgaaggtttacacgaaaaccgatggactagttgctcttcatccgaagtcg
gtcaacgtggagcaaaccgagtttcactacaactggctcatctaccacctgaagatgcgc
acgagcagcatatacttgtatgactgcacggaagtttctccatactgtctcttgttcttt
ggaggagatatttccatccagaaggataaggatcaggaaaccattgctgtggatgagtgg
attgtctttcagtctccagccagaattgcctatctcgttaaggaattaagaaaggagcta
gacatccttctgcaagagaagatcgaaagtccccgtcctgtcgactggaaggacactgaa
tccagggactgtgccgtcctctctgccatcacagacttgataaaaacacaggaggaagca
gcccccaggagcttcccgccacgactccaggatgggtactacagctga
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