Equus caballus (horse): 100054238
Help
Entry
100054238 CDS
T01058
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03008
Ribosome biogenesis in eukaryotes
ecb05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100054238 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100054238 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100054238 (DROSHA)
03009 Ribosome biogenesis [BR:
ecb03009
]
100054238 (DROSHA)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100054238 (DROSHA)
Enzymes [BR:
ecb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
100054238 (DROSHA)
Messenger RNA biogenesis [BR:
ecb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
100054238 (DROSHA)
Ribosome biogenesis [BR:
ecb03009
]
Eukaryotic type
90S particles
RNase
100054238 (DROSHA)
Prokaryotic type
rRNA processing factors
100054238 (DROSHA)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
100054238 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
Motif
Other DBs
NCBI-GeneID:
100054238
NCBI-ProteinID:
XP_001500764
Ensembl:
ENSECAG00000013578
VGNC:
17318
UniProt:
F7CCV0
LinkDB
All DBs
Position
21:33601777..33721170
Genome browser
AA seq
1374 aa
AA seq
DB search
MMQGSTCHRMSFHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPS
TTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRPPFPVPPCFPPI
PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP
NFNSFQNNPSSFPPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR
GERHRSLDRRERGRSPDRRRQESRYRSDYDRGRTPSRHRSYERSRERERERHRHRDSRRS
PSLERSYKKEYKRSGRSYGLPVVPEPAGCTPESPGEIIKNTDSWAPPLETVNHRSPSREK
KRARWEEEKDRWSDTQSSGKEKNYTSIKEKEAEETPPDKNEEEEEELLKPVWIRCTHSEN
YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS
SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA
KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI
FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY
DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA
NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA
QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV
ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP
SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS
RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR
FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN
YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL
GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA
ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND
PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA
EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEKEPDETEDIKK
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaggcagcacatgtcatagaatgtcgttccacccaggacgagggtgtccccga
gggcgaggaggacatggagccagaccctcagcaccagccttcaggccccaaaatctgaga
ctgcttcaccctcagcagcctcctgtgcaatatcaatatgaacctccaagtgccccttcc
accacattctcaaactctccagcccccaattttctgcctccacgaccagactttgtaccc
ttccctccacctatgcctccgtcagcacaaggccctcttcccccctgcccaatccggccc
ccctttcccaaccaccagatgcggccccccttcccggtgcctccttgttttcctcccata
ccacctccgatgccctgtcctaataaccctccggtccctggagcacctcctggacagggc
actttccctttcatgatgccccctccttccatgccccaccctccaccccctccagtcatg
ccacagcaggtcaattatcagtaccctccggggtactcacatcacaatttcccacctccc
aattttaatagcttccagaacaaccccagttctttcccacccagtgctaataacagcagc
agtcctcactttaggcatctccctccatacccactcccaaaggctcccagtgagagaagg
tccccggaaaggctcaagcattacgatgatcacaggcaccgggatcacagtcatgggcga
ggagagaggcatcggtccttggatcggcgggagcgaggccgaagtcctgaccggagaagg
caagagagccgctacaggtcagattatgaccgagggagaacgccgtcccgtcaccggagc
tacgagcggagcagagagcgggaacgggagagacacaggcaccgggacagccgaagatca
ccatctctggaaaggtcctacaaaaaagagtataagagatctggaaggagttatggtttg
ccagttgttcctgaacctgctggatgcacaccagaatcacctggggagattattaaaaat
acagattcttgggccccacccctggagactgtgaatcatcgctccccaagtagggagaag
aagagagctcgttgggaagaagaaaaagacagatggagtgacacccagagctctggcaag
gagaagaactatacctcaatcaaggaaaaagaggcggaggagacgccacctgacaaaaat
gaggaggaggaggaagaacttctcaagcccgtgtggattcgatgcacccactcagaaaac
tactactccagtgaccccatggatcaggtgggagattctactgtagttggaacaagtaga
ctccgtgacttatatgacaaatttgaggaagagttggggagcaggcaagaaaaagccaaa
gctgctagacctccgtgggaacctcccaagacaaagctagatgaagatttagagagttcc
agtgagtccgaatgtgagtccgatgaggacagcacctgttctagcagctcagactctgaa
gttttcgacgtcattgcagaaatcaaacgcaaaaaggcccatcctgaccgacttcacgat
gaactgtggtacaatgacccaggccagatgaatgacggaccactctgcaaatgcagcgca
aaagcgagacgcacaggaattaggcacagcatttatcccggagaagaggccatcaagccc
tgtcgtccgatgaccaacaacgctggcaggcttttccactatcggatcacggtctcccct
cccacaaactttctaactgacaggccaaccgttatagaatatgatgatcatgagtatatc
tttgaaggtttttctatgtttgcacacgcccccctgaccaatattccactgtgtaaagtg
attagattcaacatagactacacgattcatttcattgaagagatgatgcctgagaatttt
tgtgtgaaaggacttgaacttttttcattattcctattcagagatattttggaattgtat
gactggaatcttaaaggtcctttgtttgaagacagtcctccctgctgcccaagatttcat
ttcatgccacgttttgtacgatttcttccagatggagggaaggaagtgctttccatgcac
cagattctcctttatttattacggtgcagcaaagctctggttcccgaagaggagattgcc
aatatgcttcagtgggaagaacttgagtggcagaaatacgcagaagaatgcaaaggcatg
atcgtcaccaaccctggcacgaaaccaagctctgtccgcatcgatcaactggatcgtgaa
cagttcaaccccgatgtgattacttttccgattatcgtccactttgggatacgccctgca
cagttgagttatgcaggagacccacagtaccagaaactgtggaaaagttatgtgaagctt
cgccacctcctagcaaatagtcccaaagtcaagcaaactgacaaacagaagctggcgcag
agggaggaagcactccaaaaaatacgacagaagaatacaatgaggcgagaagtaacagtg
gagctaagtagccaaggattctggaaaaccggcatccgttctgatgtctgtcagcatgca
atgatgctgcctgttttgacccatcatatccgctaccaccaatgcctaatgcatctggac
aagttgataggatacactttccaagatcgttgtctgttacagctggccatgactcacccg
agtcatcacttaaattttggaatgaatcctgatcatgccaggaattctttgtctaactgt
ggaattcggcagcccaaatacggagatagaaaagttcatcacatgcacatgcggaaaaaa
ggaattaacaccttaataaatattatgtcacgtcttggccaagatgacccaactccctca
aggattaatcacaacgaacggttggagtttctgggtgatgctgttgttgaatttttgacc
agtgtccatttgtactatttgtttcctagtctggaagaaggaggattagcaacctatcgg
actgccatcgttcagaatcagcacctcgccatgctagcaaagaaactcgaactggatcga
tttatgctttatgctcatggacctgatctttgtagagaatcagaccttcgacatgccatg
gctaattgttttgaagcattaataggagccgtttacttggagggaagcctggaggaagcc
aaacagttgtttgggcgtctactctttaatgatccggacctgcgcgaagtctggctcaat
tatcctctccacccgctccaactgcaagagccaaatactgatcgacaacttattgaaact
tctccagttctacagaaacttactgagtttgaagaagcaattggagtaatttttactcat
gttcgacttctggcaagagccttcacgctgagaactgtgggatttaaccacctgacccta
ggccacaatcagaggatggaattcctaggtgactccataatgcaactggtagctacagag
tacttattcattcatttcccggatcatcatgaaggacacttaactttgttgcgaagctct
ttggtgaataacagaactcaagccaaggtagcggaggagctgggcatgcaggaatacgcc
atcaccaacgacaagaccaagaggcccgtggccctgaggaccaagaccttggcagacctt
ttggaatcatttattgcagcgctgtacattgataaggatttggaatatgttcatactttc
atgaatgtttgtttctttccacgattaaaagagttcattttgaatcaggactggaatgac
cccaaatcccagcttcagcagtgttgcttgacactcaggacagaaggaaaagagccagac
attcctctgtacaagaccctgcaaacggtggggccatcccatgctagaacctacactgtg
gctgtttacttcaagggagaaagaattggctgtgggaaaggaccaagtattcagcaagcg
gaaatgggagcagcaatggatgcacttgaaaaatataactttccccagatggcccatcag
aagcggttcattgaacgaaaatacagacaagagttaaaagaaatgaggtgggaaagagag
catcaagagaaagagccagacgagactgaagacataaagaaataa
DBGET
integrated database retrieval system
