Equus caballus (horse): 100054241
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Entry
100054241 CDS
T01058
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X2
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb02010
ABC transporters
ecb04148
Efferocytosis
ecb04975
Fat digestion and absorption
ecb04979
Cholesterol metabolism
ecb05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100054241 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100054241 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
100054241 (ABCA1)
04979 Cholesterol metabolism
100054241 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100054241 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecb02000
]
100054241 (ABCA1)
Transporters [BR:
ecb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100054241 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
100054241
NCBI-ProteinID:
XP_001493840
Ensembl:
ENSECAG00000008852
VGNC:
14898
UniProt:
F6QSK3
LinkDB
All DBs
Position
25:complement(11072759..11204718)
Genome browser
AA seq
2261 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFADARRLLLYSQRDT
SMRDIHKVLRMLRKIERSRSRLKLQDFLVVNETFSGFLSHNLSLPRPTVDSVLGADVSLR
KVFLQGYQLHLTSVCNGSKLEEVIRLSDQEVSRLCSLPREKRDAAEQVLRSNVDVLKPIL
TVLNSTSPFPSEELAEATKALLDSLGTLAQELFSMRSWSDMRQEVLFLTNVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAGTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWAELS
PKIWTFMESSSEMDLVRTLLDSRANDHFWKEQLDGLDWTAKDIMAFVAKHPEDVQSTNGS
VYTWREAFNETNRAIQTISRFMECVNLNKLEPIATEVRLINKSMELLDDRKFWAGIVFTG
IAPGSVDLPHHVKYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKSIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTLKILAS
LLSPVAFGFGCEYFALFEEQGIGVQWDTLFESPMEEDGFNLTTSVSMMLFDAFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGISEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRKRRAFGDKQSCLRPFTEDDAIDPNDSDIDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDVSTQELLNALTRDPGFGTRCMEGNPIPGMPCSVGEEEWTTAQ
VPHTIMDLFQNGNWTMENPSPACQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQSLPPSQEVNDAIKQIKK
HLKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPSRYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQLISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVNAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKV
YRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSN
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVALLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggcctcagttgaggttactgctgtggaagaacctcactttcagaagaaga
caaacgtgtcagctgctgctggaagtggcctggcctctatttatcttcctgatccttatc
tccgttcggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttatccgactcctggtgaggctcctggggttgttggaaactttaacaaatcc
attgtgtctcgcctgttcgcagatgctcggcggcttcttttatatagccagagagacacc
agcatgagggacatacacaaagtcctgagaatgttacggaagatcgagaggtccaggtca
aggttgaagcttcaggatttcctggtggtcaatgaaaccttctctggattcctgagtcac
aacctctctctgccaaggcctactgtggacagcgtgctgggagctgatgtcagtctccgc
aaggtttttttgcaaggctaccagttacatttgaccagtgtgtgcaatggatcaaaatta
gaagaggtgattcgccttagtgaccaagaagtttccaggctttgcagcctgccaagggag
aaacgggatgcagcagagcaagttcttcgttccaacgtggatgtcctgaagccaatcctg
acagtactaaactctacatctcctttcccaagcgaggagctggccgaagccacaaaagct
ttgctggacagtcttgggacactggcccaagagctgttcagcatgaggagctggagtgac
atgcggcaggaggtgttgtttctgaccaatgtgaacagctccagctcctccacccagata
taccaggctgtgtcccgcatcgtctgtggccatcctgagggtgggggcctgaagatcaag
tccctcaactggtatgaggacaacaactacaaagccctctttggaggcaatggcactgag
gaagatgctggcaccttctatgacaactctacaactccttactgcaatgatttgatgaag
aatttggagtccagtcctctttcccgcatcatatggaaagctctcaagcctctgcttgtt
gggaagatcctgtatacaccggacactcccgccacgaggcaggttatggccgaggtgaat
aagaccttccaggaactggctgtgtttcatgatctggaaggcatgtgggcagagcttagc
cccaagatctggaccttcatggagagcagctcagaaatggaccttgtccggacactgttg
gacagcagggccaatgaccacttttggaaagagcaattggatggcttagactggacagcc
aaagatatcatggcctttgtggccaagcacccggaggatgtccagtccactaatggctct
gtgtacacctggagagaagccttcaatgagaccaaccgggccatccagaccatctctcgt
ttcatggagtgtgtcaacctgaacaagctggaaccaatagccacggaagtccggctcatc
aacaagtccatggagctgctggatgataggaagttctgggctggtatcgtgttcaccgga
attgcccctggcagtgtcgatttgccccatcatgtcaagtacaagatccgaatggacatc
gacaatgtggagaggacaaataagatcaaggatgcgtactgggaccctggtcctcgggct
gacccctttgaggacatgcgatacgtctgggggggcttcgcctacttgcaggatgtggtg
gagcaggcaatcatcagggtgctgacgggcaccgagaagaaaacgggtgtctatgtgcaa
cagatgccctacccctgttatgttgatgacatcttcctgcgggtgatgagccgatcaatg
ccccttttcatgacgctggcttggatttactctgtggctgtgatcatcaagagcatcgtg
tatgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaacggcatc
ctctggttcagctggttcatcagtagcctcattcctctgctcgtgagcgccggcctgctg
gtggtcatcctgaaattaggaaacctgctgccctacagcgaccccagcgtggtgtttgtc
tttctgtccgtgttcgcggtggtgaccatcctgcagtgcttcctgatcagcacactcttc
tccagagccaacctggcggcagcctgtgggggcatcatctacttcacgctgtacctgccc
tacgtcctgtgtgtggcgtggcaagactatgtgggcttcacactcaagatcctcgcgagc
ctgctgtctcctgtggcttttgggtttggctgtgagtactttgccctcttcgaggagcaa
ggcatcggggtgcagtgggacaccctctttgagagccccatggaggaggatggcttcaac
ctcaccacctcagtctccatgatgctgtttgacgccttcctctatggggtgatgacgtgg
tacatcgaggccgtcttcccaggccagtatggaattcccagaccctggtattttccttgc
accaagtcctactggttcggcgaggaaagtgatgagaagagccaccctgggtccagccag
aagggaatatcagaaatctgcatggaggaggaacccacacacctgaagctgggcgtgtcc
attcagaacctgatgaaggtttaccgagatggcatgaaggtggcagtcgatggcctggcc
ctgaacttctatgagggccagatcacctccttcctgggccacaatggagccggaaagacc
accaccatgtcaatcttgactgggttgttccctcccacctccggcaccgcctacatcctg
gggaaagacattcgctccgagatgagcaccatccggcagaacctgggagtctgtccgcag
cacaatgtgctgtttgacatgctgactgttgaagaacatatctggttctatgcccgcctg
aaagggctctcagagaagcacgtgaaggcagagatggagcaaatggccctggatgtcggt
ctgccacccagcaaactgaaaagcaaaacaagtcagctgtcaggtggaatgcagagaaag
ctctctgtggcgttggcctttgtggggggatccaaggtggtcattctggatgagcccaca
gctggcgtggacccttactcccgcaggggaatatgggagctgctgctaaaatatcgacaa
ggccgcaccattattctctccacccaccacatggatgaagcggacatcctgggggacagg
attgccatcatttcccatgggaagctgtgctgtgtgggctcctccctgtttctgaagaac
caacttggaacaggctactacctgaccctggtcaagaaggatgtggaatcctccctcagt
tcctgcagaaatagcagtagcactgtgtcgtacctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtc
tctgctatctccaacctcatcaggaagcatgtggccgaggcccgtctggtggaagacatt
gggcatgagctgacctatgtgctgccctatgaagctgccaaagagggagcctttgtggaa
ctcttccatgagattgatgaccggctctcagaccttggcatctcaagttatggcatctca
gagactaccctggaagaaatatttctcaaagtggctgaagagagtggggtggatgctgag
acctcagatggcaccttgccagcaagacgaaagagacgtgccttcggggacaagcagagc
tgtcttcgcccattcactgaagacgatgctattgatccaaatgattctgacatagaccca
gaatccagagagacagacctgctcagcgggatggacggcaaaggctcctaccaggtgaag
ggctggaagctcacacagcaacagtttgtggcccttttgtggaagaggctgctgattgcc
agacggagtcgcaagggattctttgctcagattgtcctcccggctgtgtttgtctgcatt
gccctggtgttcagtctgattgtgccaccctttggcaagtaccccagcctggaacttcag
ccctggatgtacaatgaacagtatacatttgtcagtaatgatgctcctgaggatgtgagc
acccaggaactcttgaatgccctcaccagagaccctggcttcgggacccgatgtatggaa
ggaaacccaatcccaggcatgccctgctcagtaggggaggaggagtggaccacagcccaa
gttcctcacaccatcatggacctcttccaaaatgggaactggacgatggagaacccctca
cctgcctgccagtgtagcagtgacaaaatcaagaagatgctgcccgtgtgtcccctgggg
gctgggggactgcctcctccacaaagaaaacagaacactgcggacatccttcagaacctg
acgggaagaaacatttcggattatctggtgaagacctatgtgcagatcatagccaaaagc
ttaaagaacaagatctgggtgaatgagtttaggtatggcgggttttccctgggcgccagt
aattctcaatcacttcctccaagtcaagaagttaatgacgccataaagcaaataaagaaa
cacttgaagctggccaaggacagttctgcagatcgatttctcagcagcttgggaaggttc
atgacaggactagacacgaaaaataatgtcaaggtgtggttcaataacaagggctggcat
gccatcagctctttcttgaatgtcatcaacaatgccattctccgggccaacctgcagaag
ggagagaaccccagccggtatgggattaccgctttcaatcaccccctgaacctcaccaag
cagcagctctcggaggtggctctgatgaccacatcagtggatgtcctcgtgtccatctgt
gtcatctttgcaatgtccttcgtcccggccagctttgttgtgttcctgatccaagagcgg
gtcagcaaagcgaagcacctgcagctcatcagcggagtgaagcccgtcatctactggctc
tccaattttgtctgggacatgtgcaactatgtggtccctgccacgctggtcattatcatc
ttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtgctagccctt
ctgcttttgctgtatgggtggtccatcacacctctcatgtaccctgcctccttcgtgttc
aagatccccagcacagcctacgtggtcctcactagcgtgaacctcttcatcgggatcaat
ggcagtgtggccacttttgtgctggagctcttcaccaacaataagctgaataacatcaat
gatatcctgaagtccgtgttcttgatcttcccacatttttgcctgggacgtgggctcatt
gacatggtgaaaaaccaggccatggctgatgccttggaaaggtttggggagaatcgcttt
gtctcgccactgtcttgggacttggtgggacgaaacctcttcgccatggctgtggaaggg
gtagtgttcttcctcatcactgttctgatccagtacagattcttcatcaggcccagacct
gtaaatgcaaagcttcctcctttgaatgatgaggatgaagatgtcaggcgagaaagacag
agaattcttgatggtggaggacagaatgatatcttggaaatcaaggagttgactaaggtg
tacagaaggaagaggaagcctgctgttgacaggatttgtgttggcattcctcctggcgag
tgctttggacttctgggagttaatggggctgggaaatcatcaactttcaagatgttaact
ggagataccactgttaccaggggagatgctttccttaacaaaaatagtatcttatcaaac
atccacgaagttcatcagaacatgggctattgtcctcaatttgatgccatcacagagcta
ctgactggaagagaacatgtggagttctttgctctcttgagaggagtcccagagaaagaa
gttggcaaggttggtgagtgggcaattcggaaactaggccttgtgaagtatggagaaaaa
tatgccggtaactatagtggaggcaacaagcgcaagctctcaacagccatggctctgatt
ggtgggcctcctgtggtgtttctggatgaaccgaccacaggcatggatcccaaagcgcgg
cgattcctgtggaattgtgccctaagtattgtcaaggaagggagatcagtagtgcttaca
tctcatagtatggaagagtgtgaagcgctttgcactaggatggcaattatggtcaatggg
aggttcaggtgtcttggcagcgtccaacatctgaaaaataggtttggggatggttatact
atagttgtacggatagcagggtccaaccctgatctgaagcctgtccaggagttctttgga
ctcgcctttccaggaagcgtcctcaaagagaagcaccggaacatgctccagtaccagctt
ccatcttcactatcttctctggccaggatattcagcatcctttcccagagcaaaaagcga
ctccacatagaagactactctgtttctcagacaacacttgaccaagtatttgtaaacttt
gccaaggaccaaagtgatgacgaccacttaaaagacctgtcattacacaaaaaccagaca
gtcgtggatgttgcacttctgacatcttttctgcaggatgagaaagtgaaagaaagttat
gtatga
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integrated database retrieval system
