Equus caballus (horse): 100054366
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Entry
100054366 CDS
T01058
Name
(RefSeq) left-right determination factor 1-like isoform X1
KO
K04668
left-right determination factor
Organism
ecb
Equus caballus (horse)
Pathway
ecb04350
TGF-beta signaling pathway
ecb04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100054366
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100054366
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ecb04052
]
100054366
Cytokines and neuropeptides [BR:
ecb04052
]
Cytokines
Transforming growth factors (RSTK binding)
100054366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
100054366
NCBI-ProteinID:
XP_014593505
Ensembl:
ENSECAG00000009406
UniProt:
A0A3Q2HPZ1
LinkDB
All DBs
Position
30:7904354..7907671
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AA seq
367 aa
AA seq
DB search
MQPMWLCWALWALPLTGPGAALTEEQILGSLLQQLHLSEVPALDQGDMGQLVIPTHVRAQ
YVALLQHSHGTHSRGKRFSQNFREVAGRLLGSDASRHLLVFAMEQRLPPDRELLQAVLRL
FQEPVPEAALRTHGRLSPRSHRARVTVEWLHIRDDGSNRTSLIDSRLVSVHESGWRAFDV
TEAVNFWRQLGRPRQPLLLQVSVQREQPGPRAASAHRLVRFASQGPAGGGRGEPQLELHS
LDLGRYGAQGDCDPEAPVTEGTRCCRREMYIDLEGLKWAENWVLEPPGFLAYECVGTCRQ
PPEPLSFKWPFLGPRQCIASETTSLPVIVSVKEGGRPRAQVVSLPDMRVQKCSCASDGAP
VPRKLEP
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccatgtggctctgctgggcactctgggcgctgcccctgaccggccccggggcg
gccctgaccgaggagcagatcctgggcagcctgctgcagcagctgcacctcagcgaggtg
cctgccctggaccagggcgacatggggcagctggtcatccccacccacgtgagggcccag
tacgtggccctgctgcagcacagccacggcacccactcccgagggaagaggttcagccag
aacttccgagaggtggccggcaggctcctggggtccgacgcctccaggcacctgctggtg
ttcgccatggagcagcggctgccccccgaccgcgagctgctgcaggccgtgctgcgcctc
ttccaggagccggtccccgaggccgcgctccgcacgcacggccggctctccccgcgcagc
caccgggcccgggtcaccgtcgagtggctgcacatccgcgacgacggctccaaccgcacc
tccctcatcgactccaggctggtgtccgtccacgagagcggctggagggccttcgacgtg
acggaggccgtgaacttctggcggcagctgggccggccccggcagccgctgctgctgcag
gtgtcggtgcagcgggagcagccgggcccgcgggcggccagcgcgcacaggctggtccgc
ttcgcctcccagggcccggcgggcggcgggcgcggcgagccgcagctggagctgcacagc
ctggacctcggccgctacggagctcagggcgactgtgaccctgaggcgccggtgaccgag
ggcacccgctgctgccgccgggagatgtacatcgacctggaggggctgaagtgggccgag
aactgggtcctggagcccccgggcttcctggcctatgagtgtgtgggcacgtgccggcag
cccccggagcccctgagcttcaagtggccgtttctggggccgcggcagtgcatcgcctcg
gagacgacctcactgcccgtgatcgtcagcgtcaaggagggaggccggcccagggcccag
gtggtcagcctgcccgacatgagggtgcagaagtgcagctgcgcctcggacggggcgccc
gtgcccaggaagctggagccgtag
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