Equus caballus (horse): 100054545
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Entry
100054545 CDS
T01058
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X5
KO
K06237
collagen type IV alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04151
PI3K-Akt signaling pathway
ecb04510
Focal adhesion
ecb04512
ECM-receptor interaction
ecb04820
Cytoskeleton in muscle cells
ecb04926
Relaxin signaling pathway
ecb04933
AGE-RAGE signaling pathway in diabetic complications
ecb04974
Protein digestion and absorption
ecb05146
Amoebiasis
ecb05165
Human papillomavirus infection
ecb05200
Pathways in cancer
ecb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100054545 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100054545 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100054545 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100054545 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100054545 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
100054545 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100054545 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
100054545 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100054545 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
100054545 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100054545 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecb04147
]
100054545 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
100054545 (COL4A5)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100054545 (COL4A5)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100054545 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100054545
NCBI-ProteinID:
XP_001490469
Ensembl:
ENSECAG00000000668
VGNC:
16742
LinkDB
All DBs
Position
X:89813826..90039279
Genome browser
AA seq
1685 aa
AA seq
DB search
MKLRGVSLAAGLFLLALSLWGQPAEAVACYGCSPGSKCDCSGVKGEKGERGFPGLKGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGDPGYPGPPG
IQGLAGPTGIPGPIGRPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIPGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDVGPTGPPGRVIPRPGTGVTVGEKGS
IGLPGLPGEKGERGFPGIQGPPGLPGPPGTAVMGPPGPPGFPGERGQKGDEGPPGTSIPG
PPGLDGQPGAPGLPGPPGPPGPHIPPSDEICEAGPPGPPGSPGDRGLPGEQGVKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGHAGATGPKGLTGMPGAPGAPGF
PGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIAFKG
ERGPPGNPGLPGLPGSRGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGLPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGAPGRIGLEGPSGPPGFPGPKGEPGFGLPGPPGPPGLPGFRGTLGPKGDRGFP
GPQGPPGRTGLDGLPGPKGDIGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHG
IPGEKGDPGPPGFDVPGPPGERGSPGLPGAPGPMGPPGSPGLPGKAGASGFPGAKGEMGM
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGPPGPAGVKGGKGEPGLPGPPGPMDPDLL
GLKGEKGDPGLPGIPGISGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGPPGTPGLT
GPPGLKGNIGDMGFPGPQGVKGSPGSPGIPGQPGTPGLPGQKGEKGDPGVSGIGLPGLPG
PKGEPGLPGYPGNPGIKGSLGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKGINGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDEGLPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGLPGPEGPRGLPGNGGVKGERGNPGQPGQPGLPGLKGDQGPPGPQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGIPGLTGPEGDPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGV
PGQPGLKGLPGLPGPQGLPGPIGPPGEPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP
PGPDGLQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPQGTVQIYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGQSIQPF
ISRCAVCEAPAVVIAVHSQTIQIPRCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDMSDMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgttcttactggccctgagtctttgg
gggcagcctgcagaggctgtggcgtgctatggatgttctccaggatcaaagtgtgactgt
agtggtgtaaaaggagaaaagggggagagaggatttccaggtttgaaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
atccccggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggaccgcctgggatcccaggtatgaagggagaaccaggtagt
ataattatgtcatcactgccaggaccaaagggtgacccaggatatccaggtcctcctgga
atacaaggcctagctggtcccactggtataccaggaccaattggtcgcccaggaccacca
ggtttgatgggtcctcctggtcccccaggactgccaggaccaaagggtaatatgggctta
aatttccagggacccaagggtgaaaagggtgagcaaggtcttcagggcccccctgggcca
cctgggcagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatacctggtcctccaggtcct
ccaggtggtgtgaaaggtgagaagggtgaacaaggagagcctggcaaaagaggtaaaccg
ggcaaagatggagagaatggccaaccaggaattccaggtttgcctggtgatcctggttac
cctggtgaacctggaagggatggagaaaagggccaaaaaggtgacgttggcccaactgga
cctcctggacgtgtaattcctaggcctgggactggtgtaactgtaggagaaaaaggaagc
attggattacctggtttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ccacctggtcttcctggacctccagggactgcagttatgggtcctcctggcccccctggc
tttcctggagaaaggggccagaaaggtgatgaagggccacccggaacttccattcctgga
cctcctggacttgatggacagcctggggctcctggccttccaggtcctcctggccctcct
ggccctcacatccctcctagtgatgagatatgtgaagcaggccctccgggccctccagga
tctccaggtgatagaggactcccgggagaacaaggagtgaaaggtgacaagggtgacacc
tgcttcaactgtattggaactggtatttcagggcctccaggtcagcctggtttgccaggt
cttccaggtcctccaggatctcttggtttccctgggcagaagggtgaaaaaggacatgct
ggtgcaaccggtcccaaaggattaacaggcatgccaggagctccaggtgctccaggcttt
cctggatctaaaggtgaacctggtgacatcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttcccctggagctccggggcttcctggtttaccaggcacccctggacag
gatggattgccagggcttcctggccccaaaggagaacctggtggaattgcttttaagggt
gaaagaggtcctcctgggaacccaggtttgccaggtctcccagggagtagagggcctatg
ggccctcctggttttggccctccaggcccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggattaccaggtcctaaaggtgatccaggtcagaccataacc
cagcccgggaagcctggtctgcctggtaatccaggcagggatggtgaagtaggtcttcca
ggtgaccctggactcccaggccagccaggcttgccaggaatacccggtagcaaaggggaa
ccaggtatccctggaattgggcttcctggaccacccggtcccaaaggttttcctggaatt
ccaggacctccaggagcacctggggcacctggaagaattggtctagaaggcccttctggg
ccaccaggctttccaggaccaaagggagaaccaggatttgggctacctgggccacctggg
cctccaggactcccaggttttagaggaacacttggtccaaaaggggatcgtggttttcca
ggacctcaaggtcctccaggacgcactggcttggatgggctgcctggaccaaaaggtgac
attggaccaaatggacaacctgggccaatgggacctcctgggctaccaggaataggtgtt
cagggaccaccagggccaccggggattcctggaccaataggccaacctggcttgcatgga
ataccaggagagaagggagatccagggcctcctggatttgatgttccaggaccccctggt
gagagaggcagtccaggactccccggagcgcctggtcctatgggacccccaggatcacca
gggctcccaggaaaagcaggtgcctctggctttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
ctcaaaggtgatgacggtttacagggtcagccaggacctcctggccctgcaggagtgaaa
ggtggtaaaggagagcctggccttccaggccctcctggaccaatggatccagatctgctg
ggcttaaaaggagagaagggggaccctggcttaccaggtattcctggaatttcagggcca
aaaggttaccagggtctgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccatcaggccccaagggtaaccctggtccccctgggacgccaggacttaca
ggacctcctggacttaaaggaaacataggtgatatgggttttccaggccctcagggtgtg
aaagggtctcctggatctcctggaattcctggacaacctggcaccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtgtttcaggcattggtcttcccggtcttcctggc
ccaaagggtgaacctggtctgcctggatacccaggtaaccctggtatcaaaggttctctg
ggagatactggtttgcccggattaccagggacccctggagcaaaaggacaaccaggcctt
cctggattccctggaaccccaggccttcctggaccaaaaggtattaatggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggaggtcgtccggggccacca
gggcctccaggtgaaaaaggcaaaccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggactcccaggactt
tctggtcaaaagggtgatgaaggattgcctggcattccaggaaaccctggacttccaggt
ccaaagggcgaaccaggctttcagggtttccctggtgttcagggtcccccaggccctcct
ggttctccaggtccagctctggaaggccctaaaggcaaccctgggccccagggtcctcct
ggaagaccaggtctaccaggtccagaaggtccccgtggtctccctggaaatggaggtgtt
aaaggagagagaggaaacccaggccaacctgggcaacctggtttgcctggtttgaaagga
gatcaaggaccaccaggaccccagggtaatcctggccggccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggatttccaggcatgaaaggacccagtggaata
cctggtttaactggccctgagggggatccaggacttattggccccccaggtcctcctgga
ttacctggtccttcaggacagagtattataatcaaaggagatgctggtccaccaggggtc
ccaggccagcctggattaaaaggtctaccaggactaccaggacctcaaggcttaccaggt
ccaattggccctccaggagagcctggacgcaatggactccctggctttgatggtgcagga
gggcgcaaaggagacccaggtctgccaggccagccaggtactcgcggtttggatggtccc
cctgggccagatggattgcaaggccccccaggtcctcctggaacctcctctattgcccat
ggattcctcatcacacgtcacagccagacaacagatgcaccacaatgcccgcagggtact
gtccagatatatgaaggcttttctctcctgtatgtacaaggaaataaaagagctcacggt
caagacttggggacggctggcagctgccttcgtcgcttcagtaccatgccttttatgttc
tgcaacatcaataatgtttgcaactttgcttcaagaaatgattattcttactggctctct
accccagaacccatgccaatgagcatggagcccctgaagggccagagcattcagccattc
attagtcgatgtgcagtatgtgaagctccagctgtggtcattgcagttcacagtcagacc
atccagattccccgttgtcctcagggatgggattctctctggattggttattccttcatg
atgcatacaagtgcaggagcagagggctcgggtcaagccctggcctcccctggttcctgc
ttggaggagtttcgttcagctccttttatcgaatgtcatgggcgaggtacctgcaactac
tatgccaactcctacagcttttggctggcgactgtagatatgtcagacatgttcagcaaa
cctcagtcggaaacgctgaaagcaggagacttgaggacacgtattagccgatgtcaagtg
tgcatgaagaggacataa
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