Equus caballus (horse): 100054606
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Entry
100054606 CDS
T01058
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X4
KO
K26583
transcriptional-regulating factor 1
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100054606 (TRERF1)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
100054606 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2
zf-C2H2_4
Myb_DNA-binding
zf-C2H2_2
Myb_DNA-bind_7
zf-met
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
100054606
NCBI-ProteinID:
XP_005603972
Ensembl:
ENSECAG00000016971
VGNC:
24485
LinkDB
All DBs
Position
20:complement(42336838..42532228)
Genome browser
AA seq
1198 aa
AA seq
DB search
MGDQQLYKTNHVAHSGENLFYQQPPLGVHGGLNHNYGNTVTGAAMDAPQASPISPHFPQD
TRDGLGLPVGSKNLGQVDTSRQGGWGGHAGPGNHVQLRGNLTNSNMMWGAPAQAEPTDGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSA
LRQLLSQKPVEPPAPAIPSRYQQVPQQPHPGFTGGLSKPALQVGQHPSQGHMYYDYQQPL
AQMPVPGGQPLQAPQMLSQHMQQMQQHQYYPQQQQQQAGQQRMSMQEMQQQQQIRPPQPQ
QQQQQQQQQQQQQLQLQQRQGSMQIPQYYQSQPMMQHLQEQQQQQMHLQPPSYHRDPHQY
TPEQAHAVQLIQLGSMPQYYYQEPQQSYSHALYQQSHLPQHQQREDSQPKTYPSDRQAQA
MLSSHGDLGPPDAGLGDPASSDLNRVSSALPHRPLLSPSGIHLNNMGPQNQQLSPSAMWP
QMHLPDGRAQPGSPESSGQLKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMR
ASPSLKQEEGEKAPPPQPQPPLPPPPPPPPQLPPEAESLTPMVMPVSVPVKLLPPKPSSQ
GFANSVVAAPSARDKPASSMSDDEMPVLEIPRKHQPGAAKAEEPHKPAAPEKKKFRHRPE
PLFIPPPPSYHPSPAASYSGATLYQSQLRSPRVLGDHLLLDPAHELPPYTPPPMLSPVRQ
GSGLFSNVLISGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSSVTVTPGPGEQTVDIEP
RINIGLRFQAEIPELQDVSALAQDTHKATLVWKPWPELENHDLQQRVENLLNLCCSSALP
GGGTNSEFALHSLFEAKGDVMVALEMLLLRKPVRLKCHPLANYHYAGSDKWTSLERKLFN
KALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRRHRTRLAEIIDDCVTSEEEE
ELEEEDPEEDRKSTREDESEVPRSPEPPPGPILAPTEGPPLQALGQPSGSFICEMPNCGA
VFSSRQALNGHARIHGGTNQVTKARGAVPSGKQKPGSAQSGYCSVKSSPSHSTTSGETDP
TTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEMAATIERTTGPVGAP
TLLPLDQLSLIKPIKDVDILDDDMVQQLGGVMEEAEVVDADLLLDDQDSVLLHGDTEL
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcagcagctgtacaagaccaaccacgtggcccacagtggtgagaaccttttc
taccaacagccaccacttggggtccatggcgggctgaaccacaactatgggaatacagtc
acaggggctgccatggatgcccctcaggcctcacccatctctccccacttccctcaagat
actcgagacggtctaggcttgcctgttggctccaaaaaccttggccaagtggatacctcg
aggcagggagggtggggaggccatgcagggcctggaaaccatgtccagctacgtggcaac
ctgaccaactcaaacatgatgtggggggcaccggcccaggctgagcccaccgatggctac
caatacacctactcccaggccagtgagatccggactcagaagctcaccagcggtgtcctg
cacaaactagactctttcacccaggtgtttgccaaccaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacacccagtcagcagtgatggatggggccccggacagtgcc
ctccgccagctgctgtcccagaagcccgtggagcccccagcaccggctataccttcccgc
taccagcaggtgccccagcagcctcaccctggtttcactggtgggctgtccaaaccagcg
cttcaggttgggcagcaccctagccaagggcacatgtattatgactaccagcagccactg
gctcagatgccagtgccgggaggacagccactgcaggccccacagatgctgtcccagcac
atgcaacagatgcagcagcaccagtattacccacagcagcaacagcagcaggctgggcag
cagcgtatgtcgatgcaagaaatgcagcagcagcagcagattcgcccaccacagcctcag
cagcagcagcagcaacagcagcagcagcagcagcagcagctgcagctccagcagcggcag
ggttcaatgcagatacctcagtattatcagtcccaacccatgatgcagcacttgcaagag
cagcagcagcaacagatgcacctgcagcccccttcttatcacagggacccccaccagtac
accccagagcaggcacacgctgtccagctgattcagctgggctccatgccccagtactac
taccaggagccccagcagtcctacagccacgccctctaccagcagagccacctgcctcag
caccagcagcgggaggacagtcagcccaagacttaccccagcgacaggcaggcccaggcc
atgctgagctcccacggggacctggggcctcctgatgcaggattgggagacccagcaagc
tcggatctgaatcgggtcagcagtgccctcccccatcggccgctcctgtcccccagtggg
atccacctcaacaacatggggcctcagaaccagcagctctctcccagtgccatgtggccc
cagatgcacctacctgatggcagagcccagccagggtcccctgagtcaagtggccaacta
aaaggagtgtttggggaacagtttgatgccaagaacaagctgacgtgctccatctgcctg
aaggagttcaagagcctgcctgcgctgaatggccacatgcggtcccacgggggaatgagg
gcttcccccagcctcaaacaggaggaaggagagaaggccccgccgcctcagccccagccg
ccactgccgcctccgcctccgccgccaccgcagctccctcccgaggcagaaagcctcacg
cccatggtcatgcccgtgtctgtccctgtcaagcttctcccgcccaagcccagctctcag
ggcttcgccaacagcgtcgttgccgccccctccgccagagacaagccagccagctcgatg
tcggacgacgagatgcccgtgctcgaaattcccaggaagcatcagccgggcgcggccaaa
gctgaggagccccacaagcccgcggcgcccgagaagaagaagttccggcaccggcccgag
ccgctcttcatcccgccaccgccctcctaccacccgagccccgccgcctcctactcgggc
gccaccctgtaccagagccagctgcgctccccgcgcgtgctgggggaccacctgctcctg
gaccccgcgcacgagctgcccccctacacgcccccgcccatgctcagcccggtgcgccag
ggctcggggctcttcagcaatgtcctcatctccgggcacggccccggcgcccacccccag
ctgcccctcacgcccctcacgcccacgccgcgcgtgctgctctgccgctccaacagcatc
gatggcagcagtgtgacagtcaccccagggcctggagagcagacggttgacattgaacca
cgcatcaacattggcttgagattccaagcagagatcccagaactccaggatgtctctgcc
ctggcccaggacacacacaaggccaccctggtatggaagccctggccagagctagaaaac
cacgacctccagcaaagagtggagaatctcctgaatttgtgctgttcaagtgcattgcca
ggtggagggaccaattctgaatttgctttgcactctctcttcgaggccaaaggtgatgtg
atggttgctctggaaatgctgctgctgcggaagccagtcaggttaaaatgtcatccttta
gcaaattaccactatgccggttcagacaagtggacctccctagaaagaaagctgtttaat
aaagcactagccacttacagcaaagactttatttttgtacagaagatggtgaagtctaag
acggtggctcagtgtgtggagtactactacacgtggaagaaaattatgcggttggggcgg
aggcaccggacacgccttgcagaaatcatcgatgattgtgtgacgagtgaagaagaagaa
gagttagaggaggaggacccagaagaagataggaaatccacaagagaagacgagagcgaa
gtgccaaggtccccagagccgccgccaggccccatcctggctcccacagaggggccgccc
ctgcaggcccttggccagccctcgggctccttcatctgtgaaatgcccaactgcggggct
gtgttcagctctcgacaggcactgaacggccatgcccgcatccacggtggcaccaaccag
gtgaccaaagctcggggtgctgtcccctctgggaagcagaagcctggcagcgcccagagt
gggtactgctcggtgaagagctcgccctctcacagcaccaccagcggcgagacagacccc
accaccatcttcccctgcaaggagtgtggcaaagtcttcttcaagatcaaaagccgaaac
gcgcacatgaaaactcacaggcagcaggaggaacagcagaggcaaaaggctcagaaggca
gctttcgcggctgaaatggcagccacaatcgaaaggactacggggccagtgggggcgccc
acgctgctgcccctggaccagctgagcctcatcaaacccatcaaggacgtggacatcctc
gacgatgacatggtccagcagttaggaggcgtcatggaagaggctgaggttgtggacgcc
gatctcctcttggatgatcaagattcagttttgcttcatggtgacacggaactgtaa
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integrated database retrieval system
