Equus caballus (horse): 100054938
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Entry
100054938 CDS
T01058
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X2
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100054938
03015 mRNA surveillance pathway
100054938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100054938
Enzymes [BR:
ecb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100054938
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100054938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100054938
NCBI-ProteinID:
XP_001501014
Ensembl:
ENSECAG00000017635
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All DBs
Position
3:complement(23994871..24019116)
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSNLHLKEEKTKPDANGAVVKTSANAEKTDEEEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKVSEHIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggcagtagatgaacaggaagcggcggctgagtcgttg
agcaacttgcatctgaaggaagagaaaaccaaaccagatgccaacggtgctgttgtcaag
accagtgctaatgcagagaagacagatgaagaagagaaagaggacagagctgcccagtcc
ttactcaacaagctgatcagaagcaaccttgttgataacacaaaccaagtggaagtgctc
caacgggatccaaactcccccctctactcagtgaagtcctttgaggagcttcggctgaaa
ccacagcttctccagggagtctatgccatgggcttcaaccgtccatccaagatacaggag
aacgcactgcctttgatgcttgctgagcccccacagaacttaattgcccagtctcagtct
ggtactggcaaaacagctgcctttgtcttggccatgctcagccaagtggaacctgcaaat
agatatccccagtgtctttgcctctccccaacttatgagctcgcccttcaaacgggaaaa
gtgattgagcagatgggcaaattttaccctgaactgaagctagcttatgctgttcgaggc
aataaattggaaagaggtcaaaaggtcagtgagcacattgtcattggaacccctgggacc
gttctggactggtgctccaagctcaagttcattgaccccaagaagatcaaagtgttcgtt
ctggatgaggctgacgtgatgatagctactcagggccaccaagatcagagcatccgcatc
cagaggatgctgcccagaaactgccagatgctgcttttctctgccacttttgaagactct
gtgtggaaatttgcccagaaagtggtcccagatcctaacattatcaaactgaagcgtgag
gaggagacgctggacaccatcaagcagtattacgtcctttgcaataacagagatgagaaa
ttccaggccttgtgtaacctctacggggccatcaccattgctcaagccatgatcttctgc
catacccgcaaaacagctagttggctggcagcagagctctcaaaagaaggccaccaggtg
gccctgctgagtggtgaaatgatggtggagcagagggctgcagtgattgagcgcttccga
gagggcaaagagaaggttctggtgaccaccaacgtgtgtgcccgtggtattgatgttgaa
caggtgtctgtcgtcatcaattttgaccttcctgtggacaaggacgggaacccggacaac
gagacctacctgcaccggattgggcgcactggccgctttggcaagaggggcctggcggtg
aacatggtcgacagcaagcacagcatgaacatcctgaacaggatccaggagcattttaat
aagaaaatagaaagactggacacagatgatttggatgaaattgagaaaatagccaactga
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