Equus caballus (horse): 100054949
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Entry
100054949 CDS
T01058
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03082
ATP-dependent chromatin remodeling
ecb04714
Thermogenesis
ecb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100054949 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100054949 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100054949 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100054949 (SMARCA4)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100054949 (SMARCA4)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100054949 (SMARCA4)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100054949 (SMARCA4)
Chromatin remodeling factors
BAF complex
100054949 (SMARCA4)
PBAF complex
100054949 (SMARCA4)
GBAF(ncBAF) complex
100054949 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
100054949
NCBI-ProteinID:
XP_014597220
Ensembl:
ENSECAG00000008334
VGNC:
23319
LinkDB
All DBs
Position
7:complement(50927157..51011252)
Genome browser
AA seq
1647 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGLRPGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQTRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKRKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSDEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATSHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
QCSAGSGSASLAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGARRRPSRGS
RAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccgggcccttccccaggcccc
ggcccctcccctggagccatgttgggccccagccctggtccctcaccaggttctgcccac
agcatgatggggcccagcccagggcctccctcagcaggacaccccatcccgacccagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagccgatggagtccatgcac
gagaagggcatgtcggatgacccccgctacaaccagatgaaggggatgggcttgcggccg
gggggccacgccgggatggggcccccaccgagccccatggaccagcactcccaaggttac
ccctcgccgctgggtggctccgagcatgcctccagtccggttccagccagcggcccgtcc
tcgggcccacagatgtcatctgggcccggaggggccccgctggatggtgctgacccacag
gctttggggcagcagacccggggcccgaccccgtttaaccagaaccagctgcaccagctc
cgagctcagatcatggcgtataagatgctggccaggggacagcccctccccgatcacctg
cagatggccgtgcagggcaagcggcccatgcccgggatgcagcagcagatgccaacacta
cctccaccctctgtgtccgccacgggacccggccctggccctggccccggccccgggcct
ggtcctggcccagcacctccaaattacagcaggcctcacggcatgggagggcccaacatg
cccccccccggaccctcaggtgtgcccccggggatgccgggccagccccccggaggccct
ccgaagccctggcctgaagggcccatggcgaacgctgctgcccctacgagcacacctcag
aagctgatccccccccagccgacgggccgcccttcgcccgcgccccccgccgtcccgcct
gccgcctcccctgtgatgccaccccagacgcagtcaccggggcagccggcccagcccgcc
cccatggtgccgctgcaccagaagcagagccgcatcacgcccatccagaagccgcggggc
ctggaccccgtggagatcctgcaggagcgggagtacaggctgcaggctcgcatcgcacac
cgcattcaggaacttgaaaaccttcccggctccctggccggggatctgcgaaccaaagcg
accattgagctcaaggccctcaggctgctgaacttccagaggcagctgcggcaggaggtg
gtggtgtgcatgaggagggacacggccctcgagacggccctcaacgccaaggcctacaag
cgcagcaagcgccagtccctgcgcgaggcccgcatcaccgagaagctggagaagcagcag
aagatcgagcaggagcgcaagcgccggcagaagcaccaggagtacctcaacagcattctt
cagcacgccaaggacttcaaagagtatcatcgatccgtcactggcaaaatccagaaactt
acgaaggccgtggccacctaccacgccaacacggagcgggagcagaagaaggagaacgaa
aggatcgagaaggagaggatgcggaggctcatggcggaggacgaggagggataccggaag
ctcatcgaccagaagaaggacaagcgcctggcctacctcctgcagcagacggatgagtac
gtggccaacctcacggagctcgtgcggcagcacaaggccgcgcaggtggccaaggagaag
aagaagaagaagaggaagaagaaggcggagaacgcagaaggacagacgccggccatcggc
cccgacggcgagccgctggacgagaccagccagatgagcgacctgcccgtgaaagtgatc
cacgtggagagcgggaagatcctgacgggcaccgacgcccccaaagccgggcagctggag
gcctggctcgagatgaacccggggtatgaggtggccccgagatctgacagtgaggaaagc
ggctctgacgaagaggaggaggaggaggaggaggagcagccgcagccggcccagcctccc
acgctgcccgtggaggagaagaagaagattccagatccagacagcgacgacgtctctgag
gtggacgcccggcacatcattgagaatgccaagcaggatgttgatgatgagtacggtgtg
tcccaggccctcgctcgcggcctacagtcctattacgcagtggcccatgctgtcactgag
agagtggacaagcagtcggcgctcatggtcaacggcgttctgaagcagtaccagatcaaa
ggcctggagtggctcgtgtcgctgtacaacaacaacctgaacggcatcctggccgacgag
atgggcctggggaagaccatccagaccatcgccctcatcacgtacctcatggagcacaag
cgcatcaacgggcccttcctcatcatagtgcctctctcgacgctgtcaaactgggcatac
gagtttgacaagtgggcaccctctgtggtgaaggtgtcctacaagggctctccggcagcc
agacgcgctttcgtcccgcagctgcgcagcggcaagttcaacgtgctgctcacgacctac
gagtacatcatcaaagacaagcacatccttgccaagatccgctggaagtacatgatcgtg
gatgagggccaccgcatgaagaaccaccactgcaagctgacgcaggtcctcaacacgcac
tacgtggccccgcgccgcctgctgctgacgggcacgccgctgcagaacaagctgcccgag
ctctgggcgctcctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaacgcgcccttcgccatgaccggggagaaggtggacctgaacgaggaggaa
accatcctcatcatccggcgcctccacaaagtgctgcggcccttcctgctccggcggctc
aagaaggaagtcgaggctcagctgcccgaaaaggtggagtacgtcatcaagtgtgacatg
tcggcactgcagcgtgtgctctaccggcacatgcaggccaagggcgtgctgctgaccgat
ggctccgagaaggacaagaagggcaagggcggcaccaagaccctgatgaacaccatcatg
cagctgaggaagatctgcaaccacccctacatgttccagcacatcgaggagtccttttcc
gagcacttggggtttaccggcggcatcgtccaagggctggacctgtaccgagcctcgggg
aagtttgagctgctcgacagaattctcccgaaactccgtgccaccagccacaaagtgctg
ctcttctgtcagatgacctccctcatgacgatcatggaagattacttcgcgtatcgcggc
tttaaatacctcaggctcgatggcaccacgaaggcggaggaccggggcatgctgctgaag
accttcaatgagccgggctccgagtacttcatcttcctgctcagcacgcgcgccggcggg
ctcggcctcaacctccagtcggccgacactgtgatcatcttcgacagcgactggaacccc
caccaggacctgcaggcgcaggaccgcgcccaccgcatcgggcagcagaacgaggtgcgt
gtgctacggctctgcaccgtcaacagcgtggaggagaagatcctggccgccgccaagtac
aagctcaacgtcgaccagaaggtgatccaggccggcatgttcgaccagaagtcctccagc
cacgagcggcgcgccttcctgcaggccattctcgagcacgaggagcaggacgagagcaga
cagtgcagcgcgggcagcggcagtgccagcctcgcccacactgcccctccgccggcgggc
gtcaaccccgacctggaggagccacctctaaaggaagaagatgaggtgccggacgacgag
acggtgaaccagatgatcgcccggcacgaggaggagttcgacctcttcatgcgcatggac
ctggaccgcaggcgtgaggaggcgcgcaaccccaagcggaagccgcgcctgatggaggag
gacgagctgccctcgtggatcatcaaggacgacgccgaggtggagcggctgacctgcgag
gaggaggaggagaagatgtttggccgcggctcccgccaccgcaaggaggtggactacagc
gactcgctgaccgagaagcagtggctcaaggccatcgaggagggcacgctggaggagatc
gaagaggaggtccggcagaagaagtcgtcgcggaagcgcaagcgggacagtgacgccggc
tcctccaccccgaccaccagcacccgcagccgcgacaaggacgacgagagcaagaagcag
aagaagcgtgggcggccgcccgccgagaagctctccccgaacccacccaacctcaccaag
aagatgaagaagatcgtggatgccgtgatcaagtacaaggacagtagcagtggacgccag
ctcagcgaggtcttcatccagctgccatcccgcaaggagctgcccgagtactacgagctc
atccgcaagcccgtggacttcaagaagataaaggaacgcatccgcaaccacaagtaccgc
agcctcaacgacctggagaaggacgtcatgctgctctgccagaacgcacagaccttcaac
ctggagggctccctgatctatgaagactccatcgtcctgcagtccgtgttcactagcgtg
cggcagaaaatcgagaaggaggacgacagcgaaggcgaggagagcgaggaggaggaggag
ggcgaggaggaaggctccgagtccgagtcccgctcggtcaaggtgaagatcaagctcggc
cggaaggagaaggcgcaggaccggctgaagggggcccggcggcggccgagccgagggtcc
cgggccaagccggtggtgagcgacgacgacagtgaggaggagcaggaggaggaccgctca
ggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
