Equus caballus (horse): 100054976
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Entry
100054976 CDS
T01058
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecb03041
]
100054976 (RBM39)
Spliceosome [BR:
ecb03041
]
Common components
Common spliceosomal components
General mRNP proteins
100054976 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
100054976
NCBI-ProteinID:
XP_001501869
Ensembl:
ENSECAG00000013423
VGNC:
22243
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All DBs
Position
22:complement(27298928..27328437)
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AA seq
530 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggccccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaaaagaagcaaaagtaaggaacggaagcgaagtagggat
agagaaaggaaaaagagcaaaagtcgtgaaaggaagcgaagtagaagcaaagaaaggaga
cggagccgctcaaggagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgatcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaggaaagagatgcaaggacggttttctgcatgcagctg
gctgcaagaattcggccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgaggatgatttctgatagaaattcaagacgttccaaaggaattgcatacgtggag
tttgttgatgttagctcagtgcctctagcaataggattaactggccaacgtgttttagga
gtgccaattatagtacaggcatcacaggcggaaaaaaacagagctgcagcaatggcaaac
aatttgcaaaagggaagtgctggacctatgaggctttatgtgggctcattacactttaac
ataactgaagatatgcttcgggggatctttgagccctttggaaggattgaaagtatccag
ctcatgatggatagtgaaactggtcgatccaagggatatggatttattacgttttctgat
tcagaatgtgccaagaaggctttggaacaacttaatggattcgagttagcaggaaggcca
atgaaagttggtcatgttactgaacgtactgatgcttccagtgctagctcatttctagac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccagttaatg
gcaagacttgcagagggtacaggtttgcagatcccaccagcagcacagcaagctctacag
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccaacagactgaagcttcagctttagctgcagctgcctctgttcaacct
cttgcaacacagtgtttccaactctctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaggatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatca
attgctgcagctattgctgctgtcaatgccttgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttatcacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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