Equus caballus (horse): 100055020
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Entry
100055020 CDS
T01058
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecb02000
]
100055020 (TMC1)
03037 Cilium and associated proteins [BR:
ecb03037
]
100055020 (TMC1)
Transporters [BR:
ecb02000
]
Other transporters
Pores ion channels [TC:
1
]
100055020 (TMC1)
Cilium and associated proteins [BR:
ecb03037
]
Other cilia and associated proteins
Stereociliary proteins
100055020 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Ac76
Toddler
Motif
Other DBs
NCBI-GeneID:
100055020
NCBI-ProteinID:
XP_023482822
LinkDB
All DBs
Position
23:complement(17675436..17809609)
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AA seq
800 aa
AA seq
DB search
MIRSEEHSLQFPVTGPLDRPVVASPLVGGGLGYLSGRAAKLHECDIQIQVEEKEDDTEES
SGEEEEEEDKLPRRESLRPKRKRTRDVINEQDPEPEPEDEETRKAREKERRRRLKRGAEE
EEEIDEEELERLKAELDEKRQMIATVKCKPWKMETKIEVLKEAKKFVSENEGALGKGKGK
RWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIESQFGSSVASYFLFLRWMYGVNM
VMFILTFGLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGVLYDFNGLAQYSILFYGYY
DNKRTIGWMNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNIGDDGGGDDNAFNFSWKVFTS
WDYLIGNPETADNKFNSITMNFKEAIIEERAAQVEENVHLIRFLRFLANFFVFLTLGGSG
YLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLFAELEDYHPLIALK
WLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANITLWEANMIKAYNASLTGNTTG
PPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTILIGDFLRACFVRFCNYCWCWD
LEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGINILRLHTSMYFQCWAVMCCN
VPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSFDCGPFSGKNRMFEVIGET
LEHDFPSWMAKILRQLSNPGLVIAVVLVMALTIYYLNSTAKGQKAANLDLKKKMKQQALE
NKLRNKKMAAARAAAAARGQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgattagaagtgaggagcatagcctgcagttccctgtcacgggtcctctcgaccgccct
gtggttgcatctcctctggttggaggaggcctgggttatctgagcggcagagctgccaaa
cttcatgaatgcgatatacaaatccaagtggaggaaaaggaagatgatactgaggaaagt
tcaggtgaagaggaagaggaggaagataaactgcctcggagagagagcttgagaccgaag
aggaaacggaccagagatgtcatcaatgagcaggacccagaacctgagccagaggatgag
gaaacaaggaaagccagagaaaaagagaggaggaggaggctgaagagaggagcggaagaa
gaagaagaaattgatgaagaggaattggaaagattgaaggcagagttggatgagaaaaga
caaatgattgctaccgtcaaatgcaagccttggaaaatggagacgaaaattgaagttctc
aaggaagcaaaaaaatttgtgagtgaaaatgaaggggctcttgggaaaggcaaaggaaaa
cggtggtttgcatttaagatgatgatggccaagaaatgggcaaagtttctccgtgatttt
gagaacttcaaagctgcttgtgtcccatgggaaaataaaatcaaggccattgaaagtcag
tttgggtcctcggtggcctcgtacttcctgttcttgagatggatgtatggagtcaatatg
gttatgtttatcctgacgttcggcctcatcatgttgccagagtacctctggggtttgccg
tatggcagtctacctagaaaaacagttcccagagctgaagaggcctctgcagcgaacttt
ggtgtattgtacgacttcaatggcttggctcagtattccatcctcttttatggctattac
gacaataaacgaacgatcggatggatgaatttcaggctgccgctctcctattttctggtg
gggattatgtgcattggatacagctttctggttgtcctgaaagcgatgaccaaaaatatt
ggtgacgatgggggtggtgacgacaacgctttcaacttcagctggaaggtgttcaccagc
tgggactacctgattggcaatcctgaaacagcagacaacaaattcaattctatcaccatg
aactttaaggaagctataatagaagaaagggcggcccaagtagaagaaaatgtccacttg
atcagattcctgaggtttcttgctaacttcttcgtgtttctgacgctcggcgggagtgga
tacctcatcttttgggctgtgaagcgatcccaggaatttgcgcagcaagatcctgacacc
cttgggtggtgggaaaaaaatgaaatgaacatggtcatgtccctcctggggatgttctgt
ccaacactgtttgacttatttgctgaattagaagactaccatcccctcatcgctctgaaa
tggctgctgggacgtatttttgctcttcttttaggcaatttgtatgtatttattcttgcc
ttgatggatgagattaacaacaagattgaagaggaaaagctagtaaaggccaatattact
ctatgggaagccaacatgatcaaggcctacaatgcatcgctcactggaaataccactggg
ccacccttttttgtgcaccctgcagatgtacctcgaggaccctgttgggaaacaatggtg
ggacaggaatttgtgcggctgaccgtttctgatgttctgaccacctatgtcacaatcctc
atcggggactttctccgggcatgttttgtgagattttgcaattactgctggtgttgggat
ttggaatatggatatccttcatacacagagtttgacatcagtggcaacgtcctcgctctg
atcttcaaccaaggcatgatctggatgggctccttctttgcccccagcctcccgggcatc
aatatcctccgactccacacgtccatgtacttccagtgctgggccgtgatgtgctgcaac
gttcctgaggccagggtcttcaaagcttcccgatcgaataatttctacctggggatgctc
ttgcttatcctcttcctgtccaccatgccggtcctgtacatgatcgtgtccctcccgccg
tcctttgattgtgggcccttcagtggtaaaaataggatgttcgaagtcattggagaaaca
ctggagcacgatttcccaagctggatggcaaagatcttgagacagctttctaatcctgga
ctggtcatcgctgtcgttttggttatggctttgaccatctattatctcaattctactgca
aaggggcagaaggcagcaaatctggatctaaaaaagaagatgaaacagcaagctttggag
aacaaactgcgaaacaagaaaatggcagctgcccgagcagctgcagctgctcgtggccag
taa
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