Equus caballus (horse): 100055153
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Entry
100055153 CDS
T01058
Symbol
EXOSC3
Name
(RefSeq) exosome complex component RRP40
KO
K03681
exosome complex component RRP40
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100055153 (EXOSC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100055153 (EXOSC3)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100055153 (EXOSC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP40_S1
RRP40_N_mamm
KH_6
RRP4_S1
Rrp40_N
Motif
Other DBs
NCBI-GeneID:
100055153
NCBI-ProteinID:
XP_001915160
Ensembl:
ENSECAG00000005469
VGNC:
17733
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Position
25:complement(2882614..2887973)
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AA seq
275 aa
AA seq
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MAEAAAVVAESLAGGRARAARTVLDQVVLPGEELLLPEQEDADGPGGAGERPLRLNAGAR
ARVRVVCGPGLRRCGDRLLVTKCGRLRHKEPGGGSGGGVYWVDSQQKRYVPVKGDHVIGI
VTAKSGDIFKVDVGGSEPASLSYLAFEGATKRNRPNVQVGDLIYGQFVVANKDMEPEMVC
IDSCGRANGMGVIGQDGLLFKVTLGLIRKLLAPDCEILQELGKLYPLEIVFGMNGRIWVK
AKTIQQTLILANILEACEHMTADQRKQIFSRLAES
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcggcggccgtggtggccgagtccctggcgggtggccgggcgcgggcggcg
cgcacggttctggatcaggtggtgctcccgggtgaggagctgctgctgccggagcaggag
gacgccgacggcccgggaggtgcgggggagcgaccgctgcgcctgaatgccggggcgcgc
gcccgcgtgcgcgttgtgtgcggcccgggcttgcggcgctgtggcgaccgcctgctggtc
accaaatgcggccgcctccgtcacaaggagcctggcggtggcagcggcggtggcgtttac
tgggtggactcgcagcaaaaacggtatgtcccagtgaaaggagaccatgtgatcggcata
gtgacagctaaatctggagatatattcaaagttgatgttggagggagcgagccggcttct
ttgtcttacttggcatttgaaggtgcaactaaaagaaacagaccaaatgtacaggttgga
gatctcatctatggccagttcgtggttgctaacaaagatatggaaccagagatggtttgt
attgacagctgtggacgagccaacggaatgggtgtgattggacaggatggtctgcttttt
aaagtcactttaggcttgattagaaagttgctagctccagactgtgaaatcctgcaggaa
ctgggaaaactctacccactggagatagtatttggaatgaatggaagaatatgggttaag
gcaaaaaccattcagcagaccttaattttggcaaacattttagaagcttgtgaacacatg
acagcagatcaaagaaaacagatcttctccagattggcagaaagttga
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