Equus caballus (horse): 100055169
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Entry
100055169 CDS
T01058
Symbol
VIRMA
Name
(RefSeq) protein virilizer homolog isoform X1
KO
K22910
protein virilizer
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100055169 (VIRMA)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
100055169 (VIRMA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIR_N
Motif
Other DBs
NCBI-GeneID:
100055169
NCBI-ProteinID:
XP_001489354
Ensembl:
ENSECAG00000012879
VGNC:
24909
UniProt:
F6R0Z7
LinkDB
All DBs
Position
9:complement(42634020..42701098)
Genome browser
AA seq
1812 aa
AA seq
DB search
MAVDSAMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSSLPDNRAYG
ETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKVNTDGLVLRGWYNCL
TLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPR
GPRTPPGPPPPDDDEDDPMPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEV
EEEQQEEGEDDEDDVDVEDEEDEDEDDRHTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQ
ISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFE
IELSRMKDQGPDKENSGAIEASVKLTELLDLYREDRGAKWVTALEEIPSLIIKGLSYLQL
KNTKQDSLSQLVDWTMQALNLQVALRQPIALNVRQLKAGTKLVSSLAECGAQGVMGLLQA
GVISGLFELLFADHVSSSLKLNAFKALDSVISMTEGMEAFLRSRQNEKSGYQKLLELILL
DQTVRVVTAGSAILQKCHFYEILSEIKRLGDHLAEKTSSVPNHSEPDHDTDTGLERTNPE
YENEVEASMDMDLLESSNISEGEIEKLINLLEEVFHLMETAPHTMIQPPVKSFPTMARIT
GPPERDDPYPVLFRYLHSHHFLELVTLLLSIPVTSAHPGVLQATKDVLKFLAQSQKGLLF
FMSEYEATNLLIRALCHLYDQDEEEGLQTDGVIDDAFALWLQDSTQTLQCITELFSHFQR
CTASEETDHSDLLGTLHNLYLITFNPVGRSAVGHVFSLEKNLQSLITLMEYYSKEALGDS
KSKKSVAYNYACILILVVVQSSSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKN
LRFEINGIPNLIEYVKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAV
IQLFSAEGMDTFIRVLQKLNSILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTEL
LRGGSFEFKDMRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTFTQGVNEKLT
ISEETLANNTWSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQVIEPHDISVA
LNTRKLWSMHLHVQAKLLQEIVRSFSGTTCQPIQHMLRRICVQLCDLASPTALLIMRTVL
DLIVEDLQSTSEDKEKQYTSQTTRLLALLDALASHKACKLAILHLINGTIKGDERYAEIF
QDLLALVRSPGDSVIRQQCVEYITSILQSLCDQDIALILPNSSEGSISELEQLSNSLPNK
ELMASICDCLLAMLANSESSYNCLLTCVRTMMFLAEHDYGLFHLKSSLRKNSNALHSLLK
RVISTFSKDTGELASSFLEFMRQILNSDAMGCCGDDSGLMEVEGAHPSRTMSINAAELKQ
LLQSKEESPENLFLELEKLVLEHSKDDDNLDSLLDNVVGLKQMLESSGDPLPLGDQDVEP
VLSAPESLQNLFNNRTAYVLADVMDDQLKSMWFTPFQAEEIDTDLDLVKVDLIELSEKCC
SDFDLHSELERSFLSEPSSPGRTKTTKGFKLGKHKHETFITSSGKSEYIEPAKRAHVVPP
PRGRGRGGFGQGIRPHDIFRQRKQNTSRPPSMHVDDFVAAESKEVVPQDGIPPPKRPLKV
SQKISSRGGFSGNRGGRGAFHSQNRFFTPPASKGNYSRREGTRGSSWSAQNTPRGTYNES
RGGQSNFNRGPLPPLRPLSSTGYRPSPRDRASRGRGGLGPSWASANSGSGGSRGKFVSGG
SGRGRHVRSFTR
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggactcggccatggagctgctatttttagatacttttaaacacccgagcgct
gagcaaagttctcatatagatgtggttcgttttccatgtgtggtttatatcaatgaagtc
cgagtcatacccccaggagtcagagcccatagcagcctgcctgacaatagagcatatggg
gagacatctccgcacacatttcaattagacttattctttaacaatgtaagcaaaccaagt
gccccagttttcgataggttgggaagcctggaatatgatgagaatacttccatcatcttt
agacccaactcaaaggtgaatactgatggtttggtgctaagaggctggtacaactgtctg
acactggcaatatatggatcagtagatagagtcataagtcatgacagagactctccacca
ccaccacctccacctccaccacctccccagccacagccaagtttgaaaaggaatccaaaa
catgctgatggggagaaagaagatcagtttaatggaagccctccaagaccacagccaagg
ggaccaagaactccaccaggtccccctccacctgatgatgatgaagatgatcccatgcct
ttgccagtgtctggtgacaaggaagaggatgctcctcatagagaagattactttgagccc
atttctcctgatcggaattctgttccccaggaaggtcaatattctgatgaaggagaagta
gaagaggaacagcaagaagaaggagaagatgacgaagatgatgtggatgtagaggacgaa
gaggatgaagatgaggatgatcgccatacagtagacagtatccctgaagaggaagaggaa
gatgaagaggaagaaggtgaggaagatgaagaaggtgaaggggatgatggttacgaacaa
atttccagtgatgaagatggaattgctgacttggaacgtgaaacatttaagtatccaaac
tttgatgttgaatacactgctgaagacttagcttccgttcctcctatgacatacgatcca
tatgatagggagcttgtaccactcttatacttcagctgtccatacaagactacttttgaa
attgaactcagtagaatgaaggatcaaggtccagataaagaaaattcaggagcaatagaa
gcctcagtgaagttaactgaactcttagatttgtatcgggaagatagaggtgcaaaatgg
gtaacagctttagaagaaattccaagtttaataataaaaggattaagttatttgcaattg
aaaaacacaaaacaagactccctcagccagttggtagactggactatgcaagctttaaat
ttacaagtagcccttcgccaacccattgccttaaatgtccgacagcttaaagctgggacc
aaattagtgtcctcactggcagaatgtggggctcaaggagtcatgggactgctacaagca
ggagtgatcagtgggttatttgagctcctgtttgctgatcatgtctcatcttcccttaag
ttaaatgcttttaaagctttggacagtgttattagtatgacagaaggaatggaagctttt
ctaagaagtaggcaaaatgagaaaagtggttatcaaaaacttctggagctcatcctttta
gatcagactgtgagggttgtcactgctggctcagccatccttcagaagtgccatttctat
gaaatcttgtcggagattaaaagacttggtgatcatttagcagagaagacttcatctgtt
cctaaccacagcgaaccggatcatgacacagatactggacttgagagaacgaacccagaa
tatgagaatgaggtagaggcttcaatggatatggatcttttggaatcctcaaatataagt
gaaggggaaatagaaaaacttattaacctcctagaagaagtatttcatttaatggaaact
gcacctcatacaatgattcaacctcctgttaagtctttcccaacaatggcacgtattact
ggacctccagagagggatgatccataccctgttctctttaggtatcttcacagtcatcac
ttcttggagttggttactttgcttctgtcaattccagtaacaagtgcccaccctggtgtg
ctgcaagccacaaaagatgttttaaaatttcttgcacagtcacaaaagggtcttcttttt
tttatgtcagaatacgaagcaacaaatttgttgatccgagctctgtgtcacctttatgat
caagatgaagaggaaggtctccaaactgatggtgttattgatgatgcatttgccttgtgg
ctacaggactcaacacagacattgcagtgtattacagaactgtttagccattttcaacgt
tgtacagccagtgaagaaactgaccattcagatctcttgggaacccttcacaatctttat
ttgattacttttaatcctgtgggaagatcagctgttggccatgttttcagtcttgagaaa
aatctccaaagtcttattactctaatggagtactattccaaagaagccttaggtgattcc
aagtctaagaagtcagtagcttataattatgcatgcatacttattttggtggtggttcag
tcttccagtgacgtgcagatgctcgaacagcatgcagcgtctctcttgaagctttgtaaa
gcagatgaaaataatgctaaattgcaagaacttggcaagtggcttgaacctctgaaaaac
cttagatttgaaattaatggcatcccaaatctaattgaatatgttaaacagaatattgac
aatttgatgaccccggaaggagttggccttaccactgccttacgagttctctgtaatgtg
gcatgcccaccaccccccgttgaaggtcaacagaaagacctgaaatggaatcttgctgtt
attcagcttttttctgctgaaggaatggacacctttattcgggttctgcaaaaattgaac
agtattctgactcagccttggaggctccatgtcaacatggggactacccttcacagagtt
actactatttcaatggctcgctgcacactcactcttcttaaaactatgttaacagaactc
ctgagaggtggatcctttgagtttaaggacatgcgtgttccttcagcacttgttacttta
cacatgctcctgtgctctatccccctctcaggccgtttggatagtgatgaacagaaaatt
cagaatgatatcattgatatcttattgacttttacacaaggagttaatgaaaaactcaca
atctcggaagagactctggccaataatacttggtctttaatgttaaaagaagttctttct
tcaatcttgaaggttcctgaaggatttttttctggactcatactcctttcagagctgctg
cctctaccattgcccatgcaaacaactcaggttattgagccacatgatatatcagtggca
ctcaacacccgaaaattgtggagcatgcaccttcatgttcaagcaaaattgctccaagaa
atagttcggtctttctctggcacaacctgccagcccattcaacatatgttacggcgtatt
tgtgttcaattgtgtgaccttgcctcaccaactgcacttctgattatgagaactgtgttg
gatttgattgtagaagacttgcaaagcacttcagaagataaagaaaaacagtatactagc
caaaccaccaggttgcttgctcttcttgatgctctggcttcacacaaagcttgtaaatta
gctattttgcatctaattaatggaactattaaaggtgatgaaagatatgcagagattttc
caggatctgttagctttggtacggtctcctggagacagtgttattcgccaacagtgtgtt
gaatatatcacatccattttgcagtctctctgtgatcaggacattgcacttattttgcca
aactcttctgaaggttcaatttctgaactggagcagctctctaattctctaccaaacaaa
gaattgatggcctcaatctgtgactgtctactggctatgctagctaactctgagagcagt
tacaactgtttattaacatgtgtcagaacaatgatgtttcttgcagagcatgattatgga
ttatttcatttaaaaagttctttaaggaaaaacagtaatgctctgcatagtttattgaaa
cgagtgatcagcacattcagtaaggacacaggtgaacttgcatcttcatttttggaattt
atgagacaaattcttaactctgacgcaatgggctgttgtggagatgatagtggtctcatg
gaagtagagggagctcatccatcacggacgatgagtattaatgctgcagagttaaaacag
cttctacaaagcaaagaagaaagtccagaaaatttgttccttgaactagagaagcttgtt
ttggaacattcgaaagatgatgacaatctagattctttgttggacaatgtagttggactt
aagcaaatgctggagtcatcaggtgatcctttacctcttggtgaccaggatgtagaacca
gtactgtcagctccagaatctctccagaatctgtttaataataggactgcatatgtgcta
gctgatgtcatggatgatcagttgaaatctatgtggttcactccatttcaggctgaagag
attgatacagatctggatttggtaaaggttgacttaattgagctgtctgaaaaatgctgt
agtgactttgacttgcattcagaattagagcgctcctttttgtcagaaccatcatctcca
gggagaaccaagactactaaaggattcaaacttgggaaacacaagcatgagacctttata
acttcaagtggaaaatctgaatacattgaacctgccaaacgagctcatgttgtgccacca
ccaagaggaaggggcaggggaggatttggacaaggtatacgaccccatgatatttttcgt
cagagaaaacagaacacaagcagaccaccatctatgcatgtggatgactttgttgcagct
gaaagtaaagaagtggtccctcaagatggaatacccccaccaaaacggccactcaaagta
tcccagaagatttcttctcgtggtggattttcaggcaatagaggaggacggggtgccttt
cacagtcagaacagatttttcacaccacctgcttcaaaaggaaactacagtcgtcgggag
ggaacaagaggctccagttggagtgctcagaatactcctcgaggaacttacaatgaaagt
cgcggaggccagagcaattttaataggggccctcttccaccattacgaccgcttagttct
acaggctaccgaccaagtcctcgtgaccgtgcttccagaggtcgtgggggacttgggcct
tcctgggcaagtgcaaatagtggcagtggaggctcaagaggaaagtttgttagtggaggc
agtggtagaggtcgtcatgtacggtcctttacacgataa
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integrated database retrieval system
