KEGG   Equus caballus (horse): 100055473
Entry
100055473         CDS       T01058                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ecb  Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecb03400]
    100055473 (MDC1)
DNA repair and recombination proteins [BR:ecb03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    100055473 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 100055473
NCBI-ProteinID: XP_005603738
Ensembl: ENSECAG00000011057
VGNC: 20052
LinkDB
Position
20:complement(30636507..30652509)
AA seq 2068 aa
MMMEDTQAINWEVEEEEETERPSESLGCSLAPVGRLRIFSSAHGPEKDFPLYLGKNVVGR
MPDCSVALPFPSISKQHAVIEILAWGKAPILQDSGSLNGTQILRPPKVLSPGVSHRLRDQ
ELILFADLLCQYHRLDAPLPFVSRGPLTVEETPKVQGGTHPRGLLLAEDSEEEVDPLSER
HVVKEPRTTSSSLATVVPESDEEGPSPAPGGPGPPFAFNLDSDTDEEESQQPATGEAFSA
AMTDATVETEPPKAITTEIQLEKDQCSVEERDNATKVKRDARNEVVPVGVILERTQPAEE
DSDTDVDDESRPPGRPAEVHLESAQPSGFIDSDTDVEEEGIPTTPAVVPMKKRQVFHGDD
AKSPGAPGLANLQENPAGSDTDVEEGEALLTVPLERSQASMVIDSNTDDEEEVSAALTLA
RLKESRTLTWHRDTDVEEDKAQPVVLLEQSQTSARRDSDTDVEEEGPPVEKRGTVPKDCT
DKAHSEKSQPPLGDSDIEMEEDKSSPAVHLERSEASATVDVNTQVKEEVLPGPAVTPLEK
HQVPVAWTNQTDVEADRGPAKLPMVCLEEAQPPPVGDCEITSLNASAVTDVRKSQFPTGG
DAGTEWAVAVLEQERAPEAGAQGGSPVALVEQGLLPVSRENLTDLVVDTGTPGEPTQPRR
EGAQTPKEGKREPRMDGTKDSADARDVLKAEKSTIKVPAYSVSDSEDLDLQATQCFVEKE
GQSLEAVQSTEDEPTQAFLLSPPQEPGPSRCSFQAEEKNAILSQTYGATSLASFLKRLPR
ELLYEGALDELWEVLATQPYCPRESEASETQPIAAHLEAHGSCPSPPRATPGEQHPESPV
HAEPLGIQGRGMQTVEKDMGTPGETADRVNPERGPLERATKKPPPEGERKDVMGEEELTW
GLRDSQQKQVLARDTQRQESDKKVTSASPESGMESLKVEIETAREIQEKEREKQTLAREI
FEREAEKLVPGRVCEVGGLEVKVSKVIQERGPEAGEPERGTQDQEGQASSPTPEPRVGAG
GLQALASAVVASGSQSGGGRGVPVSPRRQERDHLNCKMPPAEKASRGDQESPEACLPPAV
TEASAPLQNPLMSQSQKHPTPQPLPSLELPIPRARQNGSQGAPEIPPSELEPLHPKPKVR
PRGSSRMLPSPMSSIAPESHPTTPTDQPVSPEPTSRATRSRTYRSSEMTPAPVVPTAPEL
QSSTSKDQPVTAKLTSRATRGRTHRSSVKSPEPVVPTAPELQPSTSKDQPVTPEPTSQGR
THRSSVKAPEQVVPTAPELQPSTSKDQSVIPTPTSRATRGRTHRSSVKTPEPVVPTAPEF
QPPTPTDQPVTLELISRATRGRTHRASVKTPEPVVPTAPELQPPTSKDQSGILTPTSRAT
RGRTHRFSVKSPEPIVPIAPELQPSTPTDQSVASEPTSGTTQGRTHRSSVKTPELVVPTG
PEFQPSTSINQLVTPKPTSQPRTHRSSVKTPEPIVPTTSELQPSTPTDQPVTPKPTSRAT
RGRKHRSVNTSEPIVPTAPELQPSTPTDKPVTRKPTSRATRGRTHRSSVKTPEPIVPTAP
ELQPSTPTDKPVTCKPTSRATRGRKHRSSVKTPKPIVPTASQLQPSTPTDQSVTPESTTQ
DIRGRKHRSSVKTPQPMEPTAPGHEPPSHTDQPVTPEAIAPASQSRTLRTSIISAVPVPT
TPEFRSPVPTDQPIPPETIPQANCSRRPRATRKQGSPTAPIVHEPCSAPPEPNSRNQRRR
AVRAAESLTTIPEPAFAQLPEAPTHAPHIEKVEAAGTSGFTPEPQRKASQSHKRPLATLD
LPPLQKRLQRGKVSQKTAFLQEEEDDPTERPGKKEVVVMPGPGKRKRDQAEEEGILSRSL
RRTKPNQESTAPKVLFTGVVDVRGERAVLALGGSLASSVAEASHLVTDRIRRTVKFLCAL
GRGIPILSLDWLHQSRKAGCFLPPDEYVVTDPEQEENFGFSLRDALSRARERRLLEGYEI
HVTPGVQPPPLQMGEIISCCGGTVLPSMPRSYKPQRVVITCSQDFPRCAIPSRVGLPILS
PEFLLTGVLKQEAKPEAFVLSALEMSST
NT seq 6207 nt   +upstreamnt  +downstreamnt
atgatgatggaggacacccaggctattaactgggaggttgaagaagaggaggagacagag
agacccagtgaatccttggggtgtagcttggcgcccgtagggcgactgcgtatcttcagt
agtgcccatggaccagaaaaagatttcccactctacctcgggaagaatgtggtaggccga
atgcctgattgctctgtggccctgccctttccatccatctccaaacaacatgcagtgatt
gaaatcctggcctggggcaaggcacctatcctccaggattctgggagcctcaatgggact
caaatcctgaggcctcctaaggtcctgagccctggggtgagtcatcgtctgagagaccag
gagttaattctctttgctgacttgctctgccagtaccatcgcctggatgcccccctgccc
tttgtctctcggggccctctaactgtagaggagacacccaaggtacagggaggaactcat
ccccgggggctcctgttggctgaggactcagaggaggaagtagatcctctttctgaaagg
catgtggtgaaagaaccaaggaccacatcttcttctttggcaacagtagttccagagagt
gatgaagaggggccttcccctgccccaggtggccctgggccaccttttgccttcaacttg
gacagtgacacagatgaggaagaaagtcagcaaccagcaacaggggaggccttctcagct
gccatgacagatgccactgtagagacagaaccgcctaaagccatcacaactgaaatccag
cttgaaaaggatcagtgttcagtggaggaaagggacaatgccacaaaagtcaagagggat
gcaaggaatgaagtggttccagttggagtgattctggagaggacccaacctgctgaggag
gacagtgacacagatgtggatgatgagagcaggcctccaggaaggccagccgaagtccat
ttggaaagtgcccagccttctggcttcatagacagtgatactgatgtggaagaagagggg
atccccacgaccccagctgtagttcctatgaagaagaggcaagtcttccatggagatgat
gcaaagagtcctggggcacctggcttggcgaatctgcaggagaacccagctggtagtgat
acagatgtggaggagggcgaggccctactaacggtccctctggagagaagccaagcctcc
atggtgatcgacagcaatacagatgatgaggaagaagtctcagcagcactcactttggca
cgtctgaaagagagccgaacccttacctggcacagagatacagatgtggaagaggacaag
gcccaacctgtggtccttctggagcaaagccaaacctccgccaggagagacagtgacaca
gatgtggaggaggaggggcccccagtggaaaagagaggaactgtccccaaggattgcaca
gacaaagcacattcagaaaagagccagcctcctcttggggatagtgatatagagatggag
gaagataagagctcacctgcagtccacctggagagaagtgaagcctctgccacagtggat
gtcaacacacaagtgaaggaggaagtcctaccagggccagctgttacacctctggagaag
catcaggtgcctgtggcgtggacaaatcaaacagatgtggaagcagacaggggcccagca
aagctgcctatggtgtgtctagaggaagcccagcctcctccagttggggactgtgagatc
acatccttaaatgcctcagcagtgacagatgtaagaaagagccagtttcccacaggaggg
gatgctgggacggaatgggctgtggctgttcttgagcaggagagagctcctgaggcgggg
gcccagggtgggtcacctgtggcactagtggagcagggccttctccctgtctcaagggaa
aacctaacagatctggtggtggacacaggcactccaggggaacccacccagccacggaga
gagggagcccagacccccaaagaagggaagagagaaccacgtatggatgggaccaaggac
tctgcagatgcccgtgatgttctaaaggctgagaagtccacgatcaaggtgccagcgtat
tcagtgtctgattctgaagatctagacctacaggctacccagtgctttgtggagaaagag
ggtcagagcctggaagcagtccagagcacggaggatgaacctacccaggccttcctgtta
agtccaccccaagagcctggcccttcccgttgcagcttccaggccgaagaaaaaaatgcc
atattaagtcagacctatggagcaactagtctagcatcgtttttaaagaggctaccgaga
gagcttttatatgaaggtgccctggatgagctgtgggaggtcttggctacacagccatac
tgtccaagagaatctgaggcctctgagacccagcccattgccgcccaccttgaggcccat
ggatcttgcccctcaccacctagggcaacaccaggagaacaacatccagagagcccagtt
catgcagagccactggggattcaaggaagagggatgcagactgtggagaaagacatgggt
acaccaggagaaacagcagacagggtgaaccctgagagaggaccattggagagggcaacc
aagaaaccgccaccagaaggagagagaaaagatgtgatgggagaggaagaattaacttgg
gggctacgggacagtcaacaaaaacaggtgttagctagagacactcagagacaagagtct
gacaaaaaggtgacaagtgcaagtcccgaaagtggtatggagagtttgaaggtagaaatt
gagacagccagggaaatacaagagaaagagagagaaaagcagactcttgcaagagaaata
tttgaaagagaagcagagaaattagtaccagggagagtgtgtgaggtaggtgggttagag
gtcaaggtatccaaagtgatacaggagagaggccctgaggcaggggagccagagagaggg
acccaggaccaggaagggcaggcctccagtccaacaccagagcctcgggtgggggctggg
ggccttcaggcactcgcttcagctgtggtagcttctgggagccaatcaggtggaggaagg
ggcgtcccagtgagtcccaggaggcaggagagagaccacttgaattgcaagatgccacct
gctgagaaggcttctaggggtgatcaggaatccccagaggcttgtctgcctcctgcagtg
actgaagcctcagccccgctccaaaaccccctcatgtctcagagccaaaaacatcctaca
cctcagcctctgccttccttagagctgcccattcccagggccaggcaaaatgggagtcag
ggagccccagagattcctccctcagagctggagcctctgcatccaaaacccaaagtcagg
ccccgggggtcctccaggatgttaccctctccaatgtcttctatagcccctgagtcccac
cctaccacccccacagaccagcctgtcagccctgagcccacatctcgggccactcggagc
agaacatacaggtcttctgaaatgacccctgcaccagttgtccccacagcacctgagctg
caatcttccacctctaaagaccagcctgtcaccgctaagctcacatctcgggccactcgg
ggaaggacacataggtcctctgtcaagtcccctgaaccagttgtccccacagcccctgag
ctccagccttccacctctaaagaccagcctgtcactcctgagcccacatctcagggcagg
acacatagatcttctgtcaaggcccctgagcaagttgtccctacagctcctgagctgcaa
ccttccacctccaaagaccagtctgtcatccccacacccacatcccgggccactcggggc
aggacacataggtcctctgtcaagacccctgaaccagttgtccccacagcccctgagttc
cagcctcctacccccacagaccaacctgtcacccttgagctcatatctcgggccactcgg
ggcagaacacacagagcctctgtgaagactcctgaaccagttgtccccacagctcctgag
ctgcagcctcccacctccaaagaccagtctggcatcttaacacccacatctcgggccact
cggggcagaacacataggttctctgtcaagtcccctgaaccaattgtccccatagcccct
gagcttcagccttctacccccacagaccaatctgtcgctagtgagcccacatctggcacc
actcagggcaggacacataggtcttctgtcaagacccctgaactagttgtacccacaggt
cctgagttccagccttccacttccataaaccaacttgtcacccccaaacccacatctcag
ccaaggacacataggtcttctgtcaagacccccgaaccaattgttcccacaacctcagag
ctccagccttccacccccacagaccaacctgtcacccccaaacccacatcccgggccact
cggggcagaaaacataggtctgtcaacacctctgaaccgattgtccccacagcccctgag
ctccagccttccacccccacagacaaacctgtcacccgcaagcccacatctcgggccact
cggggcagaacacataggtcttctgtcaagacacccgaaccaattgtccccacagcccct
gagctccagccttctacccccacagacaaacctgtcacctgcaaacccacatctcgggcc
actcggggcagaaaacataggtcttctgtcaagacccccaaaccaattgtccccacagcc
tcacagctccagccttccaccccgacagaccaatctgttacccctgagtccacaactcag
gacattcggggcagaaaacataggtcctctgtcaagactccccaaccaatggaacccaca
gcccctggccatgaacctcccagccatacagaccagcctgtcacccctgaagccatagct
ccggctagtcagagcaggacactaaggacttctataataagtgctgtgccagttcctacc
acccctgaattccggtctcctgtccccacagaccagcctattccccctgagaccatccct
caagccaattgcagcaggaggccaagggccactaggaagcaggggtcccccacagctccc
attgtccatgaaccctgctctgcaccccctgaacctaactcgaggaaccaaagacgaaga
gcagtgagagcagctgagtcccttacaaccattcctgagcctgcctttgcccagcttcct
gaggcgcccactcatgctccccacatcgaaaaggtagaggcagcaggtacatctgggttc
accccagagccccagcgtaaggcctctcaaagccacaagaggcctttagctaccctggat
ttacccccacttcaaaaacggctccaaagagggaaagtctcccagaagacagcgttcctc
caggaagaggaagatgatcccacagagagaccagggaagaaagaggttgtagtgatgcca
ggaccaggcaagagaaagagagaccaagcagaagaagagggaatactgagccgcagcctc
cgaagaaccaaacctaaccaagagtccacagcccccaaagtgctcttcacaggagtggtg
gatgttcgaggagagcgggcagtactggccctggggggaagtctggccagctcagtggca
gaggcttcccacctggtgactgatcgaatccgccggacggtcaagttcctgtgtgccctg
gggcgggggatccccatcctctccctggactggctgcaccagtcccgcaaagctggttgc
ttcttgccaccggatgaatacgtggtgaccgatcctgagcaggaagagaactttggcttc
agccttcgggatgctctgagccgagctcgggagcgaaggctgctggagggctatgagatt
catgtgacccctggagtccagccacctccacttcagatgggagagatcatcagctgctgt
ggaggcactgtcctacccagcatgccccggtcctataagcctcagagagttgtgatcaca
tgctcccaggacttcccccgatgcgccattccatctcgggtcgggctgcccatcctctca
cctgagttcctgctgacaggagtgctgaagcaggaagccaagccagaggccttcgtcctc
tccgctttggaaatgtcatccacctga

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