KEGG   Equus caballus (horse): 100055474
Entry
100055474         CDS       T01058                                 
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X5
  KO
K14409  protein SMG7
Organism
ecb  Equus caballus (horse)
Pathway
ecb03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100055474 (SMG7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecb03019]
    100055474 (SMG7)
Messenger RNA biogenesis [BR:ecb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     100055474 (SMG7)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100055474 (SMG7)
SSDB
Motif
Pfam: EST1_DNA_bind EST1 TPR_2
Other DBs
NCBI-GeneID: 100055474
NCBI-ProteinID: XP_001489684
Ensembl: ENSECAG00000004313
VGNC: 23340
LinkDB
Position
5:17702084..17784914
AA seq 1120 aa
MRNWMFLQIVIVGENVSFKSQMRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWSVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNKSQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTNVTPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RQIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPGEAKENLILQETSV
IESLAADGNPGLKSVLSTGRSLSNSCDTGEKPVVTFKENIKPREVNRDQGRSFPPKEVKS
QTELRKTPVSEARKTPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAF
SMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQPPQ
PPSQQPLTSLPAQPTAQSTSQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYQQADAS
KQLWNPPQVQGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPY
NHNPSEVKVPEFYWDSSYSMADNRAVMAQQANMDRRGKRSPGVFRPEQDPVPRMPFEKSL
LEKPSELMSHSSSFLSLTGFSLNQERYPNNSVFNEVYGKNLTTSSKAELNPSMAPQETSL
YSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDN
RDRRTADRWKTDKPAMGGFGIDYLSATSSSESSWHQASTPSGTWTSHGPSMEDSSAVLME
SLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq 3363 nt   +upstreamnt  +downstreamnt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatttaagtcc
cagatgaggaccggaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagctgaggtctggacg
tccaggcaggctctgcaggacctgtaccagaaaatgctagttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcatgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaacccgaatcggagtgaagttcaggcaaatctt
tctctgttcctagaggcagctagtggcttctacactcagttattacaagaactgtgtaca
gtgtttaatgtagatttaccatgccgtgtgaagtcttcccagttgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccgcagtctagctcctgttcctatatctgc
cagcactgcctcgtccaccttggagacattgctcgatacagaaatcagaccagccaggca
gagtcctactataggcatgcagctcagcttgtcccctctaatggtcagccttacaaccag
ttggctatcttagcttcttccaaaggggaccacctgaccacaattttctactactgcaga
agcattgctgtgaagttccctttcccagctgcctccactaatctacaaaaagcactttct
aaagcactggaaagccgggatgaggtgaaaaccaaatggagtgtttctgacttcatcaag
gcctttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagagaaattggaagaacagtttaagaggctgctattccaaaaagctttcaactct
cagcagttagttcatgtcactgtcattaacctgtttcaacttcatcaccttcgtgacttt
agcaatgagacggaacagcatagttacagccaagatgaacagctgtgttggacacagttg
ctggccctctttatgtcttttcttggcatcctgtgcaagtgtcctctccagaacaagtct
caggaagagtcctacaatgcctatccccttcctgcagtcaaggtctccatggactggctg
agactcagacccagagtctttcaggaggcagtggtggatgaaagacagtacatttggccc
tggctaatttctcttctaaatagttttcatccccatgaagaggatctttcaagtactaat
gttacaccacttccagaggagtttgagttacaaggattcttggctttgagaccttctttc
aggaacttggatttttccaaaggccaccagggtattacaggagacaaagagggtcagcaa
cgacaaatacgacagcagcgcttgatctctataggcaagtggatcgccgataatcagcca
aggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagag
ttaatactggaagatcccggtgaagccaaagagaacctcattctgcaagaaacatccgtg
atagagtcactggctgcggatgggaacccagggctgaagtcagtgctgtctacaggccga
agtctaagcaacagctgtgacacaggagagaaaccagtggtcaccttcaaagagaacatt
aagccacgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtgaaatcc
cagacagaactaagaaagacccccgtttctgaagccaggaaaacacctgtaactcaaacc
ccaagtcaagcaagtaactcccagttcatccccattcatcaccctggagccttccctcct
cttcccagccggccagggttcccgcccccaacatatgttatcccccctcctgtggcattt
tctatgggctcaggttacaccttcccagctggtgtttctgtcccaggaacctttcttcag
cctacagctcactctccagcaggaaaccaggtgcaagctgggaaacagtcccacattcct
tacagccagcaacggccctctggaccagggccaatgaaccagggacctcaaccaccacag
ccaccttcccagcaaccccttacatctttaccagctcagccaacagcacagtctacaagc
cagttgcaggttcaagccctagctcagcaacagcaatcccctacaaaagccgtgccagct
ttggggaaaagccctcctcaccactctggattccagcagtatcaacaggcagatgcctcc
aaacagctgtggaatccccctcaggttcaaggcccattagggaaaatcatgcctgtgaaa
cagccctactaccttcagacccaagaccccataaaactgtttgagccgtcattgcaacct
cctgtaatgcagcagcagcctctagagaaaaaaatgaagccttttcccatggagccatat
aaccataatccctcagaagtcaaggtcccagaattctactgggattcttcctacagcatg
gctgataacagagctgtaatggcacagcaagcaaatatggaccgcaggggcaaacgatca
ccaggagtcttccgtccagagcaggatcctgtgcccaggatgccatttgagaaatcctta
ttggagaagccctcggagctcatgtcacattcatcttctttcctgtccctcaccggattc
tctctcaatcaggaaagatacccaaataacagtgtgttcaatgaggtatatgggaaaaac
ctgacaaccagctccaaagcagaacttaatccctcgatggccccccaggaaacatcactg
tactctctttttgaagggactccgtggtctccatcacttcctgccagttcagatcattca
acaccagccagccaatctcctcattcctctaacccgagcagcctgccaagctcccctcca
acacacaaccataattctgttccattctccaattttggacccatcgggactccagataac
agagataggagaactgcagatcggtggaaaactgacaagccagccatgggtggatttggc
attgattatctctcagcaacgtcatcctctgagagcagttggcatcaggccagcactcca
agtggcacctggacaagccatggcccctccatggaggattcctctgctgtcctcatggaa
agcctaaagtctatctggtccagttccatgatgcatcctggaccttccgctctggagcag
ctgttaatgcagcagaagcagaaacagcagcggggacaaggcaccatgaaccctccacac
tga

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