Equus caballus (horse): 100055652
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Entry
100055652 CDS
T01058
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
ecb
Equus caballus (horse)
Pathway
ecb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100055652 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecb03009
]
100055652 (NVL)
Ribosome biogenesis [BR:
ecb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100055652 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_22
AAA_16
AAA_5
TIP49
AAA_14
AAA_2
AAA_33
AAA_28
nSTAND3
Mg_chelatase
NPHP3_N
RNA_helicase
AAA_17
AAA_18
ABC_tran
NACHT
IstB_IS21
ATPase
AAA_3
Zeta_toxin
Rad17
Viral_helicase1
TsaE
Sigma54_activ_2
Parvo_NS1
RsbRD_N
Motif
Other DBs
NCBI-GeneID:
100055652
NCBI-ProteinID:
XP_005608047
Ensembl:
ENSECAG00000014421
VGNC:
20982
LinkDB
All DBs
Position
30:9279429..9369803
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AA seq
856 aa
AA seq
DB search
MKPRPARFVDNKLKQRVIQYLTSNRCGKYVDTGVLASDLQRMYSIDYGRRKRNAFRIQVE
KVFSILSSEKELKDIRELEDEHLAKRARQGEDENEYTESYSDDDSNVEDYPDAQSANHMN
SSLLSLYRKGNPDSVSSTPEMEQRETTVSTPRITSKAVSIPSKTPARGSDRGWFIDKMPG
GKKDSFFLDLSDEKSNRKKLISEIEDSKDSSLLESNEQRKGRLKSKGSKRKKEDLQEADG
EIAAVLEKRAKARGLELQISSVTFEDVGGNDTTLKEVCKMLIHMRHPEVYHHLGVIPPRG
VLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCI
LFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNAAATARVLVIGATNRPDSLDPAL
RRAGRFDREICLGIPDEASRERILQTLCRKLRLPDTFHFRHLAHLTPGFVGADLMALCRE
AAMCAVHRVLMKLQEQQKKDPETEGLPSEGGREERAGTEPTSETQDELQRLLGLLRNQDP
LSEEQLQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAP
VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE
RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFI
MAATNRPDILDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDTDVNLEQIA
RDCRCDRYSGADLSALVREASLCALRQEMARQRSGSEKGELKIGQKHFEEAFEKVKSSIS
RKDQAMYEAVQRSLSR
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccagacccgcgaggttcgttgataacaagctgaagcagcgagtcatccagtac
ctcaccagtaacagatgtggcaaatatgtggacactggagtcttagcatctgatttacaa
agaatgtatagtatagactatggtcgaaggaaaagaaatgctttcaggattcaggtagaa
aaagtatttagcatacttagtagtgagaaagaacttaaggatataagagaattggaagat
gaacatctggcaaaaagagcaagacaaggtgaagatgagaatgagtatactgaaagctat
tctgatgatgattcaaatgtggaagattacccagatgcacagtccgcaaatcatatgaac
agttccctgctctccttatatcggaaaggaaatcctgattctgtttcaagtactcctgag
atggagcaaagagaaaccactgtctcaacaccacggataacttccaaagcagtctccatt
ccttcgaagacccctgccagaggttctgaccgaggatggtttattgacaaaatgccaggt
ggaaagaaagacagttttttcctggacctatcagatgaaaaaagtaatcgtaagaagcta
atatctgagatagaggattcgaaagattcttctcttctggagagtaatgaacaaaggaaa
ggtaggctaaagagcaaaggaagcaaaaggaagaaagaagatctccaggaagcagatgga
gaaatagcagctgtcctggaaaagagagctaaagccagggggctagagctgcagatctcc
agcgtgacgttcgaagatgttggaggcaatgatacgacattaaaagaagtctgcaagatg
ctcatacacatgcgtcacccggaggtgtaccaccacctgggcgtcattccccctcgtgga
gtcctccttcatggaccgccaggctgtgggaagacattgctggcacatgcaattgctggg
gaacttgaccttccgattctgaaagtagctgctacagaagttgtgtctggagtatctgga
gaatctgaacagaagctgagggaactgttcgaacaagctgtgtcaaatgcaccctgtatc
ctttttattgatgaaattgatgctattacccccaaaagagaagttgcttccaaagatatg
gaacgaaggattgtggcccagctcctaacctgcatggatgatctgaataacgcggcggct
acagctcgggtcctagtcattggagccactaaccggccagattccttagaccctgctttg
agacgtgctggaaggttcgaccgagaaatatgcctcggcatcccagatgaagcatccagg
gaaagaatacttcagactttgtgcagaaaactacgacttcccgacacttttcattttcgc
cacttagcacacctgacgccgggctttgtcggcgctgatctgatggcgctctgccgagag
gcagccatgtgtgcagtccacagggtcttaatgaagctccaggagcagcagaagaaagat
cccgagactgaaggtttgccgtctgaaggaggccgggaagagagggctggaactgagccc
acttccgaaacacaggatgaattgcaaaggctactggggttgctaagaaaccaagatccc
ctctcagaggagcagctgcaagggctgtgcattgaactgaatgatttcattgttgctcta
tcctctgtgcaaccctctgccaaaagggaaggctttgtcactgtgcctaatgtgacgtgg
gcagatattggtgccctggaggatattagagaggagctcaccatggcaatattggcgcca
gtacgtaacccagatcagttcaaagctcttggattggtgactccagctggagtcctcctt
gctggtcctcctggctgtgggaaaactctgctggcaaaggctgttgcaaatgagtctgga
ctaaattttatatcagtcaagggccctgaattactaaatatgtacgttggtgagagtgag
cgtgcggtgcgacaggtgtttcagcgagccaagaactcagcgccctgtgtgatcttcttt
gatgaagtggacgccttatgcccccgaagatcagaccgagagacgggggcaagtgtccgg
gtggtgaatcagctgcttacagagatggatggtctagaaacacgtcagcaggtttttatt
atggcagccactaacaggccagatatccttgaccctgcgatcctgcgcccaggccggctg
gataagacactctttgtgggtctgccgcccccagcagatcgcctcgccatcttaaaaacg
atcacaaaaaatggcaccaaacccccactggacacagatgtaaatttggaacaaattgct
cgtgactgccgctgtgatcgctattcgggcgcggatctctctgccttggtgcgggaagct
tctctgtgtgccctgaggcaggaaatggcaagacagaggagtggaagtgaaaaaggtgag
ctcaagatcggtcagaagcactttgaagaagctttcgagaaagtaaaatcatctatatca
agaaaggatcaggcgatgtatgaagctgtgcagcgctccctaagccgctga
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