Equus caballus (horse): 100055793
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Entry
100055793 CDS
T01058
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
ecb
Equus caballus (horse)
Pathway
ecb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100055793 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100055793 (TGFBRAP1)
Membrane trafficking [BR:
ecb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100055793 (TGFBRAP1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
VPS3_N
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
100055793
NCBI-ProteinID:
XP_023474261
Ensembl:
ENSECAG00000007311
VGNC:
24057
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All DBs
Position
15:4463734..4531520
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AA seq
891 aa
AA seq
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MFLLYCPWVNPMLVFYPQVHLPRRKSDQPADMMSTKAFSLVSAVERELLMGDKERVNIEC
VECCGRNLYVGTSDCFVYHFLLEENTLPAGTATFTATKQLHRHLGFKKPVNELRAASALN
RLLVLCDNCITLVNMMSLEPVPSGARIKGATAFALNENPVSGDPFCVEVCIISVKRRTIQ
VFMVYEDRVQIVREVSTPEQPLAVAVDGHFLCLALTTQYIILNYSTGVAQDLFPYCSEEK
RPIVKRIGRQEFLLAGPGGLGMFATVAGISQRAPVHWSENVVGAAICFPYVIALDDEFIT
VHSMLDQQQKQTLPFKEGHILQDFEGRVIVATSKGVYILVPLPLEKQIQDLLASRRVEEA
LILAKGARRNIPKEKFQVMYRRILQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLYPF
LLPTSSSFTRSHPPLHEYADLNQLTQGDQEKMAKCKRFLMSYLNEVRSTEVANGYKEDID
TALLKLYAEADHDSLLDLLVTENFCLLTDSAAWLEKHKKYFALGLLYHSNNQDAAAVQLW
VNIVNGEIHDSTRSDLYEYVVDFLTHSLDRELVWQYAGWALQKSEEVGVQVFTKRPLNEQ
QKSSFNPDDVITCLKKYPKALVKYLEHLVVDRSLQKEEYHTRLALLYLDEVLRQGPSTGG
RGAEVTETQAKLRQLLQKSDLYRVHFLMDRIQGAGLPMESAILHGKLEEHEEALRILVHE
LRDFSAAEDYCLWRSEGRAPPYRQRLFHTLLAIYLGPGPSAPELTVAAVDLLNHHATEFD
AAQVLQLLPGTWSVQLLCPFLTGAMRDSVHTRRTAQVAVGLAKSENLIYKYDKMKLKGSS
VRLSDKKLCQMCQNPFCEPVFVRYPNGGLVHTHCAASRQTNPSSPSPGTRT
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgttatactgtccatgggtgaatcctatgctcgtcttctacccgcaggtgcat
ctcccaagaagaaagtcagaccagccagcagacatgatgagcaccaaggccttttcgctg
gtctccgccgttgagcgggagctgctgatgggcgacaaggagcgcgtcaacatagaatgc
gtggagtgctgcggcaggaacctctacgtgggcaccagcgactgcttcgtttaccacttc
ctgctggaggagaacactttgcccgcagggacagccacattcactgccactaagcagctg
cacagacacctgggtttcaagaagccagtgaacgagctgcgagccgcgtcggcgctcaac
aggctgctggtgctctgcgacaactgcataactctggtcaacatgatgagcctggagccc
gtcccctcaggggcccgcatcaaaggggccacggccttcgccttgaacgagaaccctgtg
agcggggacccgttctgcgtggaagtctgcatcatctcggtcaaacgcagaaccatccag
gtgttcatggtgtacgaggaccgggttcagatcgtcagggaagtgtcgacgccggagcag
cccctggccgtggctgtggacggccacttcttgtgcctggctctgaccacccagtacatc
atcctcaactacagcacgggcgtcgcccaggacctgtttccttactgcagcgaggagaag
cgcccgatcgtcaagaggatagggagacaggagttcctgctggcgggccccggagggctg
ggcatgtttgcgaccgtcgctgggatatcgcagcgagcccccgtgcactggtcagagaac
gtggtcggggcagccatctgctttccgtatgtcattgcgctcgatgacgagttcatcacg
gtgcacagcatgttggatcagcagcaaaagcagaccctgccctttaaggaaggccacatt
ctacaggattttgaaggcagagtgattgtcgccacaagtaaaggagtttacatcttggtt
ccattacctctggaaaaacaaatacaggatcttctagcaagccgtagagtggaagaggct
ttgattttagccaaaggagcccggaggaacattccaaaagaaaaatttcaggtgatgtac
aggaggatcctgcagcaggcggggttcatacagtttgcgcagctgcagttcctggaagct
aaagagctcttcagaagcggccagcttgacgtccgggagctgatctctctctaccccttc
ctgttgcccacctcctcttcattcacacggtctcaccctcctctccacgagtatgcagac
ctcaaccagctgacccaaggggaccaggagaagatggccaagtgcaagcgcttcctcatg
agctacttgaacgaggtccgcagcacagaggtagcaaacggctacaaggaagacatcgac
acagccttgctcaagctgtatgcggaggctgaccatgacagtctgctggacctcctggtc
accgagaacttctgtcttctgaccgacagcgctgcctggctagagaagcacaaaaagtat
tttgcactgggactgctctatcattctaataaccaggatgcggctgcagttcagttgtgg
gtgaacatcgtgaatggggaaattcacgactccacacgctcggacctgtacgagtacgtc
gtcgacttcctcacccacagcctggaccgggagctggtgtggcagtacgcgggctgggcc
ttgcagaaaagtgaggaggttggagttcaagttttcaccaagagacctttgaacgaacag
cagaagagtagttttaacccagacgatgttatcacttgccttaagaaataccctaaagct
ctcgttaagtacctggagcacctggttgtggacaggagcctgcagaaggaagagtaccac
acacgcttagcactcctctacctggacgaggtgctgcgacagggacccagcactggtggc
aggggtgcggaagtgaccgagacgcaggcaaagctacgacagctgctgcagaaatccgac
ttgtaccgagtccactttctgatggatagaatccagggcgccggccttcccatggagagc
gccatcctgcacgggaagctggaggagcacgaggaagccctgcgcatcctggttcacgag
ctgagggacttctcggcggccgaggactactgcctgtggcgctccgagggcagggcccca
ccctaccggcagcggctcttccacacgctgctggccatttacctcggccccgggccctcc
gcacccgagctgaccgtggccgccgtggacctcctgaaccaccacgccacggaatttgac
gcggcccaggttctgcagctgctgccgggcacctggtcagtgcagctcctctgcccgttc
ctgacgggggccatgagggacagtgtccacaccaggaggacagcacaggtggctgtcggc
ctggccaagtctgaaaacttaatctacaaatacgataagatgaagttgaaaggaagctca
gttcggctctcggacaaaaagctttgccagatgtgccaaaatcccttttgtgagcccgtg
tttgttaggtatccaaatggaggtctcgtccacacgcactgtgctgccagcagacaaacg
aaccccagttcccccagccctggcacccggacttga
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