Equus caballus (horse): 100055840
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Entry
100055840 CDS
T01058
Symbol
TNFRSF1B
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B isoform X3
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
ecb
Equus caballus (horse)
Pathway
ecb04060
Cytokine-cytokine receptor interaction
ecb04061
Viral protein interaction with cytokine and cytokine receptor
ecb04668
TNF signaling pathway
ecb04920
Adipocytokine signaling pathway
ecb05014
Amyotrophic lateral sclerosis
ecb05022
Pathways of neurodegeneration - multiple diseases
ecb05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
100055840 (TNFRSF1B)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100055840 (TNFRSF1B)
04061 Viral protein interaction with cytokine and cytokine receptor
100055840 (TNFRSF1B)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
100055840 (TNFRSF1B)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100055840 (TNFRSF1B)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100055840 (TNFRSF1B)
05022 Pathways of neurodegeneration - multiple diseases
100055840 (TNFRSF1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ecb04050
]
100055840 (TNFRSF1B)
04090 CD molecules [BR:
ecb04090
]
100055840 (TNFRSF1B)
Cytokine receptors [BR:
ecb04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
100055840 (TNFRSF1B)
CD molecules [BR:
ecb04090
]
Proteins
100055840 (TNFRSF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
100055840
NCBI-ProteinID:
XP_014593157
Ensembl:
ENSECAG00000012481
VGNC:
24370
LinkDB
All DBs
Position
2:complement(39737051..39770700)
Genome browser
AA seq
459 aa
AA seq
DB search
MALVVFPRSVPEPSNLCQPREYYDERAQRRCSQCPPGCRAKSFCNETSDTVCVPCEDSTY
TQLWNWLPECLSCGSRCSTGQVETQACTLKQNRICTCEPGRYCILPRQEGCQVCGLLRKC
PPGFGVAKPGTATSNVVCAACAPGTFSDRTSSTDTCRPHRNCSSVAVPGNASMDAVCKSV
LPTPRVASEPASAPQPGSTRSHHAELTRGPSTAPGTSPLPPMVPSPPAEGLITGNFSLPI
GLIVGVTALGLLVIGLVNCVIMTQKKKKSFCLQGEAKVPHLPADKAGGAPGQEQQHLLTT
AQSSSSSSLESSASTADKRAPTGDQLHAPGTGKASGPGEVRASSSSSAEPSSGSHGTQVN
VTCIVNVCSNSGHGSQCPSQTSSTAGDTDASPSDSLKDEQVPFSKEECPCQSQSGASETL
LQNPEEKPLPLGVPEGGVKSLTRPARDASQPRGADLWAF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggccctggtggtgtttccccgctctgtcccggagcccagcaacttgtgccagccaaga
gaatactacgacgagagggcccagaggcggtgcagccagtgtccacccggctgccgcgca
aaaagtttctgcaacgagacctcagatacggtgtgtgtcccctgcgaggacagcacatac
acccagctctggaactggctccccgagtgcctgagctgtggctcccgctgcagcaccggc
caagtggaaactcaagcctgtactttgaagcagaaccgcatctgcacctgcgagccgggc
aggtactgcatacttccaaggcaggaggggtgccaggtctgcgggctgctgcgcaagtgc
ccgcccggcttcggcgtggccaagccaggaactgcgacatcaaacgtggtgtgcgctgcc
tgtgccccagggacattctccgacaggacgtcgtccacagatacttgcaggccccaccgg
aactgtagctcggtggccgtccctggcaatgccagcatggatgccgtctgcaagtctgtg
cttcccaccccgagagtggcctcggagccagcctctgcgccccagccagggtccacgaga
tcccatcacgcggagctgacccgcgggcccagcacagctcctggtacctcccccctgccc
ccgatggttccaagccccccagctgaagggctcatcactggcaacttctcccttccaatt
gggctgatcgtgggagtgacagccttgggtctgctagtaatcgggctggtgaactgtgtc
atcatgacccagaagaaaaagaagtccttctgcctgcaaggagaagccaaggtgcctcac
ctgcctgctgataaggccggaggggctccgggccaggagcagcagcacctgctgaccaca
gcgcaaagctccagcagcagctccctggagagctcggccagcaccgcggacaagagggcg
cccacgggggaccagctgcatgccccaggcacggggaaggccagcgggcctggggaggtg
cgggccagctccagcagctcagcagagccttcctctggcagccacgggacccaggtcaac
gtcacatgcatcgtgaatgtttgcagcaattccggccacggctcccagtgcccctcccag
accagctccactgcgggggacacggatgccagcccctcagactccctgaaggacgagcag
gtccccttctccaaggaggaatgcccttgtcagtcccagtcgggggcttcagagactctg
ctgcagaacccagaggagaagccgctgccccttggcgtgcccgagggaggggtgaagtcg
ttaaccaggccagcaagggacgcgtcacagccgagaggcgctgatctctgggccttctag
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