Equus caballus (horse): 100055865
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Entry
100055865 CDS
T01058
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X4
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb03015
mRNA surveillance pathway
ecb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100055865 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
100055865 (ACIN1)
03015 mRNA surveillance pathway
100055865 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100055865 (ACIN1)
03041 Spliceosome [BR:
ecb03041
]
100055865 (ACIN1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100055865 (ACIN1)
Spliceosome [BR:
ecb03041
]
Complex C
Other components
EJC/TREX
100055865 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
100055865
NCBI-ProteinID:
XP_001494154
Ensembl:
ENSECAG00000021097
VGNC:
14979
LinkDB
All DBs
Position
1:complement(163033933..163066079)
Genome browser
AA seq
1328 aa
AA seq
DB search
MWRRKYPSSSGGIRGVLSGNRGVDYGSGRGRLSTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSSVSEEKGESDDEKPRKGERRSSRVRQARAAKLS
ECSQVVEEEEHQETPSRNLRVRADRNLKTEEEEEEEEEEEEEEEDEETDEGHKSRDAPVL
KQFKKEEEEEMPIAKPEEMMDERPQTIRSQEQEGLERGGRVTRSQEEARRSHLARHQQEK
EMKTAAPLEEEERAIKSSKGLEEKSKSPSPPRLTEDLEKTPLVLQPEQTASEEETPPPLL
TKEASSPPPNTQLQSEEETEPMEGPAPPVLVQLSPPNTDAEARELLISQHTVQSVGGLSP
LSSPADTKAESPVEKVPEERVLPLVQKSTLAESSAQKGLETESEKSAQPLPLKFEELAPS
KGIPEQSLKQPSLEQKEGRRASHTLLPSHRVKRSADSSSSRSSSSSSSSSRSRSRSPDSS
GSESHSPLRSKQRDVSRARTHANPCGRSKMGSRSTSESRSRSRSRSRSASSNSRKSLSPG
VSRDSSTSYIETKDPSSGQEVATPPVPQLQVLEPKERTSASSSIRVRRMSQPEPAEKRVT
QRLQPERGSPKKCEAEEAEPPAATQPQTSETQTSRLPESERSHHTVEEKEEVTMETSENR
PENEVPEPPMPSADQVSNDDRPEGSAEDEEKKESSLPKSFKRKISVVSTKGVPAGNSDTE
GGQPGRKRRWGASTATTQKKPSISITTESLKEAVVDLHADDSRISEDETERNGDDGTHDK
GLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEPPIPPQVSVEVALPPPVEHEVKKVTL
GDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLGQLKELLG
RTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAEQDELD
YRRGLLVDRPSETKTEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERAVREQWAEREREM
ERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLDD
LFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERTR
QLEREKRREHSRERDRERERDRERDRGDRERDRERDRERGRERDRRDTKRHSRSRSRSTP
VRDRGGRR
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaatacccgagcagttccggaggaatccggggagttctgagtggtaat
cgaggggttgactatggcagtgggcggggtcggctcagtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcgctggagcagcgaggcctagccaagagcgggcaaaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaaacactcaacaccccatgctgca
ttccagccaaattcccagattggtgaggaaatgagccagaacagtttcataaagcagtat
ctggaaaagcagcaggagctacttaggcagcgtctggaacgtgaagctcgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcgcccagaaaaagctcctctgtttctgaagagaaaggtgaatctgatgatgagaaa
ccaaggaaaggagaaagaagatcttccagggtcagacaggcaagagcagctaaactctct
gagtgcagccaggttgttgaggaggaagaacatcaagaaacaccttccagaaacctgagg
gtcagagcagatcgaaatttgaaaacagaggaggaagaagaggaagaggaagaggaagaa
gaggaggaagaagacgaagaaacagatgagggacacaaatctagggatgcaccagtcctg
aagcagttcaagaaagaagaggaagaggagatgcccattgcaaaaccagaggagatgatg
gatgagagaccccaaaccataagatcccaggaacaggagggattagagagaggagggaga
gttacaaggtcccaggaagaggctagaagaagtcatctggccagacatcagcaggagaaa
gagatgaaaacagctgctccccttgaggaagaagaaagagcaataaaatcttcaaaaggc
ttggaggaaaaatcaaagtccccttcccctcctcgattgactgaagatctggagaagacc
cctcttgtgctacaaccagagcaaactgccagtgaggaggagactcccccacctttactt
accaaggaagcatcttctccaccacctaatacacaactccagagtgaagaagaaacagag
cccatggaaggcccagccccccctgtcctcgttcagttatctcctcctaatacagatgct
gaggccagggagctattaatatctcagcatactgtccagtcggtgggaggcctatctcct
ttgtccagtcctgcagacaccaaagcagaatctccagtagagaaagtgcccgaggaaagg
gtcttgcctctagttcagaaaagcacactagctgaatcctcagcccagaagggtcttgaa
actgaatcagaaaaatctgctcaaccactccctctaaaattcgaggaattagcaccctcc
aaagggatccctgagcaatctctgaaacagccttctttggaacagaaggaaggcagaagg
gcttctcatacccttctcccaagccacagagtaaaacgatcagctgactcctcctctagc
cggtcctcctcgtcttcatcttccagttctagatcaagatctcgctctcctgacagctca
ggctctgagtctcactcacctctgagatccaagcagagagatgtgtctcgggcacgtact
cacgccaacccttgtggtagatccaagatgggctccagatcaacatcagagtccaggtca
cgttcccgttctcgttcacgttcagcgtcaagcaacagcagaaaatctctgagccctgga
gtctctagggacagcagcaccagctacattgaaaccaaagatccctcttctggtcaggag
gttgcaactccaccagtgccacaactgcaggtccttgagccaaaggagaggacttctgcc
tcatcctctatccgagtgaggcgtatgagccaacctgagccagctgaaaagcgtgtgacc
cagaggttacagcctgagcgggggagcccaaagaagtgcgaagctgaagaggcagagcca
ccagctgccacacagccccaaacctcagagactcagacctctcgcctaccagaatcagaa
aggagtcatcacacagttgaggagaaggaggaagtgaccatggagacaagtgaaaacaga
cctgaaaatgaggttccagagccccccatgcctagtgcagaccaagtcagcaatgatgac
cgcccagagggcagtgccgaagatgaggagaagaaagagagctcgctgcccaaatcattc
aagaggaagatctccgttgtctctaccaagggggtgccagctggaaacagtgatacagag
gggggccagcctggtcggaagcggcgttggggagccagcacagccaccacacagaagaaa
ccctccatcagtatcaccactgaatccctcaaggaggctgttgtggatcttcatgctgat
gactcccgaatctctgaggatgaaacagagcgtaatggtgacgatgggacccatgacaag
gggctgaaaatatgccggaccgtcactcaggtagtacctgcagagggccaggagaatggg
cagagggaagaggaggaagaagagaaggagcctgaggcagaaccccctatacctccccag
gtttcagtagaggtggccttgcccccacctgtggagcatgaagtaaagaaagtgacttta
ggagacaccttaactcgacgttccattagccagcagaagtctggagtttccattacaatt
gatgacccagtccgaactgctcaggtgccctccccgccccggggcaagatcagtaacatc
gtccacatctccaatctggttcgtcctttcactttaggccaactgaaggaattgctgggc
cgtacaggaactctggtggaagaggccttctggattgacaagatcaaatcccactgcttt
gtaacgtactcaacagtagaggaagcagttgccacccgcactgctctacatggggtcaag
tggccccagtccaatcccaaattcctttgtgctgactacgctgagcaagatgagctggat
tatcgccgaggcctcttggtggaccgtccctctgaaactaagacagaggagcagggggtt
cctcggcccctgcaccccccacccccacccccagcccagccaccacagcatccccgggca
gagcagagggagcaggagcgggcagtgcgggaacagtgggcagagcgggaacgggaaatg
gagcggcgggagcgaacccgatcagagcgtgaatgggatcgggacaaagttcgagaaggg
ccccgttcccgatctcggtcccgtgaccgccgccgcaaggaacgtgcgaagtctaaagaa
aagaagagtgagaagaaagagaaagctcaggaggaaccacctgccaagcttctggacgac
cttttccggaagaccaaggcagctccctgcatctattggctcccgctgactgacagccag
attgtccagaaggaggccgagcgggctgaacgggccaaggagcgcgagaagcggcgaaag
gagcaggaagaagaagagcagaaggagcgggagaaggaagcagagcgggaacggacccga
cagctggagcgggagaagcggcgggagcacagccgagagagggacagggagagagagcgg
gacagggagcgggacaggggggatcgagagcgggatagggaaagggaccgcgagcgaggc
agggagagggaccgcagagacaccaagcgccacagcaggagccggagtcggagcacacct
gtgcgggaccggggcgggcgccgctag
DBGET
integrated database retrieval system
