Equus caballus (horse): 100055972
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Entry
100055972 CDS
T01058
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100055972 (TAF1C)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100055972 (TAF1C)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_C
TAF1C_beta-prop
Motif
Other DBs
NCBI-GeneID:
100055972
NCBI-ProteinID:
XP_014593879
Ensembl:
ENSECAG00000015734
VGNC:
23849
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All DBs
Position
3:complement(32159310..32170126)
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AA seq
898 aa
AA seq
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MDFPGSLRPTVFMTGPLGLSDVPDMSFMCSWRDALTLPESLPQNSENGVPHVAKGLLWEP
ETPGPLPLLPPGPDPWHPGLTAQDLLFRGGHPFQKQPRVVLDVTEQLSRFLWDHGDIAFA
PLGKLMLENFKLEGARSRSKKTTVVSVKRLLQDLDGHQPWGCPWAYLSYRQRRFSILGGP
ILGKSVANLLGDLLHEELVMRWEQLLLDDAFTGGALAWVPGKTPRVGQLVYPAGSTLDKL
YFQEVSLTPGGNPQVLRDPGHIQLRGPVRQVVTRTVQGESLLAVRSDYHCALWKVSRQGR
PAPLQVLQVEKGATGISLSPHLPGELAVCSRSGAICLWTPQDGLRRVYKDPDTLVFRDPS
PWRWADFTAHPRVLTVGDRTGVKIVDTQGPPGCGLLLFRGGAEASCQKGERVLLTQYLGE
GSPESLHSTLHLICTQFSLYLVDERLPLVPMLKWNHGLPSAPLLARLLPPPGPGCPRPLL
LGGQDGQLQLLHITGEEASTPRLAGPPQSLPSRNDSLSAFPVLEPKSQWRLQERLKAPTI
GLAAAIPPSTSTPILSLFQLSAAGDVFHQCLRLQADPGPDSCAPTVSWSPQATACCSQWL
KALLEVPPAPPVWAAPTFSHRRLLGCVEQREVEGKVPEGLRAAMAEGRLLQQRDLGSLPT
AEPPPAPEPGPDDELSKRLEAAWEGQAAAWWERRQGRSSGPRQQPKRHKRRTQLSSTFSS
LSGRLELSDVTSPPPSPDPEARPRPPGTPPSQELAQEHWARGVPSERQQTLRDYMAKLPL
REDALEDASAPPSQTSSIRATRSRQRTLQDNTAKPPLQRDTPEGASAPPSQTSSIWATRS
RQRTLQDNTAKPPLQRDTPEGAFVPSSQTSSIQATPSRQQTPVLSGSQRIRKKPRMGF
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccggctccctccgccccacagtattcatgactggcccccttggtctgagc
gatgtccctgacatgtccttcatgtgcagctggagagacgcactcaccctgccggagtcc
ctgccccagaactccgagaatggggtgccgcacgtggccaagggccttctctgggagccg
gagacccccgggccccttcccttgctgcctcctggtcctgatccctggcaccctggtctg
actgcccaggacctgcttttccggggaggtcacccgttccagaaacagccccgagttgtg
ctggatgttactgaacagctcagccggttcctgtgggaccatggggacatagcctttgca
cccctggggaagctgatgctggagaatttcaaactggagggagcacggagccgctctaag
aagacgacagtggtcagtgtgaagaggctgctccaggacctcgatggacaccagccctgg
gggtgcccctgggcttacctcagctaccggcagcgtcggttctccatcctcgggggccca
attctgggcaagtcggtggcaaacctcctgggagacctgctgcacgaggagctggtgatg
cggtgggagcagctgctcttggacgatgctttcactgggggcgcgctggcctgggtgcct
gggaagacaccccgggttgggcagctggtctaccctgcgggaagcaccctggacaagctg
tatttccaagaggtcagtctgaccccaggtggtaacccccaggtcctcagggaccctggc
cacatccagctgcgaggacctgtccggcaggtggtgacccgaactgtgcagggagaatct
ctgttggccgtccgctctgactaccactgtgccctgtggaaggtcagcaggcaggggcgg
ccggcgcctctccaggtgctgcaggtcgagaagggggccacagggatcagcctcagccct
cacctacccggggagctggccgtctgcagccgttcgggagccatctgtctgtggaccccc
caggatgggctgcggcgagtctacaaggaccctgacacccttgtgttccgggacccctct
ccctggcgttgggcagacttcaccgcccaccctcgggtgctgactgtgggtgaccgcact
ggagtgaaaattgttgacacacagggcccgccgggctgtggtctgctgctttttcgtgga
ggggcagaggcatcctgccagaaaggggaacgtgtgctgctgacccagtacctgggggag
ggcagccccgagtctctgcattccacgctccatctcatctgtacccagttctcgctctac
ctggtggatgagcgcctccccttggtgccgatgctgaagtggaaccacggcctcccctcc
gctccccttctggcccggctgctgcctccgcccgggcccggctgcccacggccgctgctc
ctggggggccaggacgggcagctgcagctgctgcacatcactggagaggaggcctccaca
ccccggctggcagggcccccccagtctctcccttccaggaatgactccctctccgcattc
cccgtgctggagcccaagagtcagtggcggctgcaggagcgtctgaaagcgccaaccata
ggtctggctgccgccatcccaccctccacctccacgccaatcctgtcgctcttccaactc
tcggcagctggagatgtcttccaccagtgcctccgcctccaggcagaccctgggcctgac
tcttgtgcccctacagtctcctggagcccccaggccactgcctgctgcagccagtggctg
aaggccttgctggaggtgcccccagctccccctgtgtgggctgcacccaccttctcccac
cgccgtctgctgggctgtgtggagcagagggaagttgaggggaaagtgccagagggtctc
cgggctgccatggccgaaggacggctcctgcagcagagggacctgggctcgctccccact
gcagagccgccccccgccccagagcctggccccgacgatgagctcagcaaacgcttggag
gcggcctgggaaggccaggcggctgcctggtgggagaggcggcagggccggagctcaggg
cccaggcagcagcccaagcggcacaagcgccgcacgcagctctccagcaccttctcctcg
ctcagtggccgcctggagctctcggacgtgaccagccctcctcccagcccagaccctgag
gcccggcctcggcccccagggaccccaccctcccaagagttggcccaggagcactgggcc
cggggcgtcccctcggagcggcagcagacccttcgggactatatggccaagctcccgctc
cgagaagacgccctagaagatgcctctgcgcccccctcccagacctccagcatccgggcc
acccgctccaggcagcggaccctccaggacaacacagccaagccaccactccaaagggac
accccagaaggtgcctctgcgcccccctcccagacctccagcatctgggccacccgctcc
aggcagcggaccctccaggacaacacagccaagccaccactccaaagggacaccccagaa
ggtgcctttgtgccctcttcccagacctccagcatccaggccactccctccaggcagcag
actcccgtcctctctggctctcagagaatccggaagaagccccgcatgggcttctga
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