Equus caballus (horse): 100056116
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Entry
100056116 CDS
T01058
Symbol
SPOP
Name
(RefSeq) speckle-type POZ protein isoform X1
KO
K10523
speckle-type POZ protein
Organism
ecb
Equus caballus (horse)
Pathway
ecb04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100056116 (SPOP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecb04121
]
100056116 (SPOP)
Ubiquitin system [BR:
ecb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
100056116 (SPOP)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
100056116
NCBI-ProteinID:
XP_001502489
Ensembl:
ENSECAG00000018287
VGNC:
23530
UniProt:
F7A1J9
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Position
11:complement(25515031..25576782)
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVLETSGWKSMVVSHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagttccaagtcctccacctccggcagaaatgtcgagtggccctgtagctgag
agctggtgctacacacagatcaaagtagtgaaattctcctacatgtggaccatcaataac
tttagcttttgccgggaggaaatgggtgaagtcattaaaagttcaaccttttcatcagga
gccaatgataaactgaaatggtgtttgcgagtaaacccaaaagggctagatgaagaaagt
aaagattacctgtcactttacctgttactggtcagctgtccgaagagtgaagttcgggca
aaattcaaattctctatcctgaatgccaagggagaagaaaccaaagctatggagagtcaa
cgggcatataggtttgtgcaaggcaaagactggggattcaaaaaattcatccgtagagat
tttctcttggatgaggccaacgggcttctccctgatgacaagcttaccctcttctgtgag
gtgagtgtggtgcaagattctgtcaacatttctggccagaataccatgaatatggtgaag
gttcctgagtgccggttggcagatgagttaggaggactgtgggagaactcccggttcaca
gactgttgtttgtgtgttgctggccaggagttccaggctcacaaagctatcttagcagct
cgttctccagtttttagtgccatgtttgagcatgaaatggaggagagcaaaaagaatcgg
gttgaaatcaatgatgtggagcctgaagtttttaaggaaatgatgtgcttcatttacacg
gggaaggctccgaacctcgacaaaatggctgatgatttactggcagctgctgataagtac
gccctggagcgcttaaaggtcatgtgcgaggatgccctctgcagtaacctctccgtggag
aacgccgcagaaattctcatcctggctgaccttcacagcgcagatcagttgaaaactcag
gcagtggatttcatcaactatcatgcttcagatgtcttggagacctccgggtggaagtca
atggtggtgtcacatccccacttggtggccgaggcataccgctctctggcttcagcacag
tgcccttttctgggacccccacgcaagcgcctgaagcaatcctaa
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