Equus caballus (horse): 100056177
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Entry
100056177 CDS
T01058
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100056177 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecb04147
]
100056177 (COPB1)
Membrane trafficking [BR:
ecb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100056177 (COPB1)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100056177 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
100056177
NCBI-ProteinID:
XP_001504991
Ensembl:
ENSECAG00000021898
VGNC:
16768
UniProt:
F6YZP7
LinkDB
All DBs
Position
7:complement(85245939..85276676)
Genome browser
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPAKKEEERP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIVDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIQQGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgctgagaatgtgtgctatacgttaattaatgtgccaatggattcagaacca
ccatctgaaattagcttgaaaaatgatctggaaaaaggagatgtaaagtcaaagactgaa
gctctgaaaaaagtaatcattatgattctgaacggtgaaaagcttcctgggcttctgatg
accatcattcgcttcgtgctgcctcttcaggatcacaccatcaaaaaattactcctggta
ttttgggaaattgttcctaaaacaactccagatgggagacttttgcatgaaatgatcctt
gtatgtgatgcatatagaaaggatcttcagcatcctaatgaatttattcgaggatctact
cttcgttttctttgcaaattgaaagaagcagaattgctagaacctttaatgccagctatc
cgagcttgtttggagcatcgacacagctatgtcaggagaaatgctgttttggccatctat
actatttatagaaattttgaacatcttatacctgatgctcctgaactgatacatgatttt
ctggtgaacgagaaggatgcaagttgcaaaaggaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattacctaagtacttgtattgatcaagttcagacatttgga
gacattcttcaattggttattgttgaactaatttataaggtctgtcatgccaatccgtca
gaaagggctcgtttcattcgctgcatctataacctgttacagtcatctagccctgctgta
aaatatgaagccgctggaacattggtgacactgtctagtgcacctacggcaatcaaggct
gctgctcagtgttacattgacttaattattaaggagagtgacaacaatgtaaagctcata
gttctggatcgattgatagaattgaaagaacatcctgctcatgaacgagtactacaggat
ctggttatggacatcctaagagtattgagcacgccagatttagaagtacgcaagaaaact
ctgcagttagcactggatcttgtctcttctaggaatgttgaagagctggttattgtcctg
aagaaggaagtgattaaaacaaataacgtgactgagcatgaagatactgacaaatataga
caactccttgtgcgaacattgcattcttgttctgtccgatttccagatatggctgcaaat
gttattcctgtgttaatggaatttctcagtgacaataatgaagcagcagctgctgatgtc
ttggagtttgtccgtgaagccattcagcgctttgataacctgagaatgcttattgttgag
aagatgcttgaagtctttcatgctattaaatccgtcaagatttaccgaggagcgttatgg
atcctgggagaatactgcagtaccaaggaagacattcagagtgtgatgactgaggttcgc
aggtccctgggggagatcccaattgtagagtcagaaataaagaaagaagctggtgaattg
aaacctgaagaagaaataactgtgggaccagtacagaaattggtaactgagatgggcacc
tatgcaactcagagtgccctgagcagttctagacccgccaagaaagaggaggaaagacct
cccctgagaggattccttctggatggagatttctttgttgctgcctcccttgccacaact
ctgaccaagattgccttgcgctatgtagctttggttcaggagaagaaaaagcaaaactct
tttgtcgctgaggccatgttgctcatggccactatccttcatttgggaaaatcctctctt
cctaagaagccaattacagacgatgatgtagatcgaatttccctgtgcctcaaggtcttg
tctgaatgttcacctttaatgaatgacattttcaataaggaatgcagacagtcgctttct
cacatgttatctgctaaactcgaagaagagaagttatcccaaaagaaagaatctgaaaag
aggaatgtgacagtacagcctgatgaccccatttccttcatgcaactcactgctaagaat
gaaatgaactgcaaggaagatcagtttcagctgagtttgctggcggcaatgggtaacaca
cagaggaaagaggcggcagaccccctagcatctaaacttaacaaggtcacccaattgaca
ggtttctcagatcctgtatatgcagaagcttatgttcatgtcaaccagtatgatattgtc
ctggatgtacttgttgtgaaccaaaccagtgatactttgcagaactgcacattagagtta
gctactctgggggatctgaaacttgtggaaaagccatctcctttgactcttgctcctcat
gattttgcaaacattaaagctaatgtcaaagtagcatcaacagaaaatggaataattttt
ggtaatatagtttatgatgtctctggagcagcaagtgacagaaattgtgtggtcctcagt
gatattcacattgacatcatggactatatccagcctgcaacttgtactgatgctgaattc
cgtcagatgtgggccgagtttgaatgggaaaacaaagtgacagttaacacaaatatagtt
gatttaaatgactatttacaacacatattaaagtcaaccaacatgaaatgcctcactcca
gagaaggcactttctggctactgtggctttatggcagccaacctctatgctcgttccata
tttggagaagatgcacttgcaaatgtcagcattgagaagccaattcaacagggaccagag
gcccctgttactggccacataagaattcgtgcgaagagtcagggaatggccttaagtctt
ggagataaaatcaacttgtctcagaagaaaactagtatataa
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