Equus caballus (horse): 100056306
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Entry
100056306 CDS
T01058
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
ecb
Equus caballus (horse)
Pathway
ecb04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100056306 (LHX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100056306 (LHX5)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
100056306 (LHX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Furin-like_2
Motif
Other DBs
NCBI-GeneID:
100056306
NCBI-ProteinID:
XP_001915147
Ensembl:
ENSECAG00000016915
VGNC:
19659
UniProt:
F6Y4K2
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All DBs
Position
8:21571080..21580907
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKANLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggttgcgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcacatcaaatgcgttcagtgctgcgagtgcaaggccaacctctct
gagaagtgcttctcacgcgagggcaagctctactgcaaaaatgacttcttcaggcgtttt
ggcaccaagtgtgcaggctgcgcgcagggcatctcgcccagcgacctggtgcgcaaggcc
cgcagcaaagtcttccacctcaactgcttcacctgcatggtgtgcaacaagcagctgtcc
acgggcgaggagctctatgtcatcgacgagaacaagttcgtgtgcaaggacgactacctg
agctcctccagcctcaaggagggtagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtccccggacctgcaggacccactccaggacgaccccaaggagacggataactcgacg
tcgtcggacaaggagacggccaacaacgagaacgaggagcagaactcaggcacgaagcgg
cgcggcccgcgcaccacgatcaaagctaagcagctggagacgctcaaggccgccttcgcc
gccacgcccaagcccacgcgccacatccgcgagcagctggcgcaggagactggcctgaac
atgcgggtcatccaggtgtggttccagaaccgacggtccaaagaacgccggatgaagcag
ctgagcgcgctgggcgcccggagacacgccttcttccggagtccgcggcgcatgcgtccg
ctgggaggccgcttggacgagtctgagatgttggggtccactccgtatacctactacgga
gactaccaaggcgactactacgcgcccggaggcaactacgacttcttcgcgcacggcccg
ccgtcccaggcgcagtccccggccgactcgagcttcctggcggcctcggggcccggctcg
acgccgctgggcgcgctggagccgccgctcgccggcccgcacgccgccgacaacccccgc
ttcaccgacatgatctcgcacccggacacgccgagccccgagccgggcctgccgggcgcg
ctgcaccccatgcccggcgaggtgttcagcggggggcccagcccgcccttccccatgagc
ggcaccagcggctacagcggacccctgtcgcaccccaaccccgagctcaacgaggccgcc
gtgtggtaa
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