Equus caballus (horse): 100056644
Help
Entry
100056644 CDS
T01058
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100056644 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100056644 (EXOSC10)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100056644 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
100056644
NCBI-ProteinID:
XP_001492550
Ensembl:
ENSECAG00000011639
VGNC:
17731
LinkDB
All DBs
Position
2:40600841..40620726
Genome browser
AA seq
886 aa
AA seq
DB search
MALPSPGEPKAPAATSAVKSDGEMVLPGFPDADSFVKFALGSVVAVTKASGGLPQFGDEY
DFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRSKVTELEDKFDLLVDTNDVI
LERVGILLDEASGVHKSQQPVLPAGLQVPKTIVSSWNRKAGEYSKKTKSETFRLLHAKNI
IRPQLKFKEKIDNSNTPFLPKIFIKPNAQKPLPQALSKERRERPQARPEDLDVPPALADF
IHQQRTQQVEQDMFAHPYQYELDHFTPPDSVLQKPQPQLYRPVAETPCHFVSSLDELVEL
NEKLLNCQEFAVDLEHHSYRSFLGLTCLMQISTRREDFIVDTLELRSDMYILNESFTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKRYCSVESNKQYQ
LADWRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNDQPVQLQVVWQRSRDVCLKK
FIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEVAAGVKKSGPLPNPE
RLENVLFGPHDCSHAPSDGYTVIPTNGPMPVQKQASLFPDQKEEEALLDTKCLVATAVIT
LFNEPSAEENGKGPLTVAQKKAQNIMESFENPFRMFLPSLEHHAHISQAAKFDPSSKIYE
ISNRWKLASQIQVQKESKETAKEEAAEQTAAQDQAKEEYRAAAEQAVSVRQQAALENAAK
KRERTSDSRTTEQKQEKKRLKIAKKPKDPDPPEKDFTPYDYSQSDFKAFAGNSKSKPSSQ
FDPNKQTQSGKKCIAAKKLKQSMGNKSMSFPAGKSDRGLRHNWPKR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcccagtcccggagagccgaaggccccggcggcgacaagcgcagtcaagtca
gacggggagatggtgctgccgggcttcccggacgcagacagcttcgtgaagtttgctctt
gggtcagtggtggcagtcaccaaagcatctgggggcctgccacagtttggtgacgagtat
gatttttaccgaagttttcctggctttcaggcattttgtgaaacacagggagatagactg
cttcagtgcatgagcagggtaatgcagtaccatgggtgtcgaagcaacattaaggatcga
agtaaagtgacagagttggaggacaagtttgacttactagttgataccaatgatgttatt
ctggaaagagtgggtattttactggatgaagcatcaggtgtgcataagagtcaacagcct
gtcctccctgcaggattgcaggtccccaaaacaatagtgtccagctggaaccgtaaggca
ggagaatatagcaaaaaaacaaaatctgaaaccttccggctgcttcatgcaaaaaacatc
atccgacctcagcttaaattcaaagagaagattgacaattccaacaccccgtttctccct
aaaatcttcatcaagcccaatgctcagaaacccctccctcaggcgctctctaaagaaagg
cgggagcgcccgcaggctcggcccgaggacttggacgtcccccctgccctggcggatttc
atccatcagcagagaacccagcaggtggagcaggacatgtttgcacatccttatcaatat
gaactagatcacttcactccaccagattcagtccttcaaaagccacaaccccagttatac
agacctgtggcagaaacaccctgccattttgtatcctccctggatgaactagtggaactg
aacgaaaagctcttgaattgtcaagaatttgctgtagacttggagcatcactcttacagg
agcttcctagggctgacctgcctgatgcagatttccacccgaagagaagacttcattgtt
gacaccctggagcttcggagtgacatgtacattctcaacgagagcttcacagacccagct
attgttaaggtcttccatggtgctgattcagacatcgaatggctacagaaagactttggg
ctctatgtagtgaacatgtttgatacccatcaggcagcacgccttcttaacctgggcagg
cactcacttgatcatctgctgaaacgctactgcagtgtggaatcaaataagcagtatcag
ctggctgattggagaatacgacctctgcctgaggagatgctcaactacgcccgcgatgac
acccattacctgctttacatttatgataagatgaggctggagctgtgggagcgaggcaac
gaccagcctgtccagttgcaggtggtgtggcagcggagcagggatgtctgcctcaagaaa
ttcatcaaacctatcttcacggatgagtcctaccttgaactgtataggaagcagaagaaa
catctcaacacacagcagttgacagcctttcagctgctgtttgcctggagggataaaaca
gctcgtagggaagatgaaagttatggatatgtactgccaaaccacatgatgctaaagata
gctgaagaactgcctaaggagcctcagggcatcatagcttgctgtaaccctgtaccacct
cttgtacggcagcagatcaatgaaatgcatcttctaatccaacaggcccgagaaatgcct
ctgctcaagtctgaagttgcagctggagtgaagaagagtggaccactgcccaatccggag
agattggagaatgttctctttggacctcacgactgctcccacgccccatcagatggctat
actgtcatcccaaccaatgggcctatgccagtgcagaaacaggcaagcctcttccctgac
caaaaagaagaggaggccctgctggataccaaatgcctggttgctactgcagtcatcaca
ttatttaatgaacctagtgctgaagaaaatggaaagggtccattaacggttgcacagaaa
aaagcccagaacataatggagtccttcgaaaatccatttagaatgtttctgccttcgcta
gaacaccacgctcacatttctcaggcagcaaagtttgacccatcgtcaaaaatctatgaa
atcagcaaccgttggaagctggcaagccagatacaggtacaaaaagagtctaaagaaact
gccaaggaggaggcagctgagcaaacagctgcccaggaccaggcgaaggaagagtacaga
gcagcagcggaacaggccgtgtctgtccgacagcaggctgccctagaaaacgctgccaag
aagagagaacgaacaagtgactcaaggaccacagaacagaaacaagagaagaaacgactc
aaaattgccaagaaaccaaaagacccagatccaccagaaaaagactttaccccttatgac
tacagccagtcggatttcaaggcttttgctggaaacagcaaatccaaaccttcttcccag
tttgatccaaataagcagacccagtctggcaagaaatgcattgcagccaaaaagcttaaa
cagtcaatgggaaacaaaagcatgtccttcccagccggaaagtcagacagaggtttaagg
cacaactggccaaagagatag
DBGET
integrated database retrieval system
