KEGG   Equus caballus (horse): 100056689
Entry
100056689         CDS       T01058                                 
Symbol
OPTN
Name
(RefSeq) optineurin
  KO
K19946  optineurin
Organism
ecb  Equus caballus (horse)
Pathway
ecb04137  Mitophagy - animal
ecb04140  Autophagy - animal
ecb05014  Amyotrophic lateral sclerosis
ecb05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100056689 (OPTN)
   04137 Mitophagy - animal
    100056689 (OPTN)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100056689 (OPTN)
   05022 Pathways of neurodegeneration - multiple diseases
    100056689 (OPTN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ecb04131]
    100056689 (OPTN)
Membrane trafficking [BR:ecb04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100056689 (OPTN)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    100056689 (OPTN)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    100056689 (OPTN)
  Xenophagy
   Cargo receptors
    100056689 (OPTN)
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 FAZ1_C
Other DBs
NCBI-GeneID: 100056689
NCBI-ProteinID: XP_005606979
Ensembl: ENSECAG00000007747
VGNC: 21047
LinkDB
Position
29:complement(22748076..22783430)
AA seq 574 aa
MSHQPLSCLTEKGDSPIETTGNGPPHLAHPSLDTFTPEELLQQMKELLTENHQLKEAMKL
NNQAMKGRFEELSAWTEKQKEERLFFEIQSKEAKERLMALSHENEKLKEELGKLKGKTER
SFEDPTGDPKVPKAEAEQEMEQLKTQVARLQAEKADLLGIVSELQLKLNSSGPSEDSFVE
IRMAEGEADVAMKEFKTRPGRTRTESIDMSKSAEGTRNYLEFEELTVSQLMLCLREGNQK
VEKLEIALKEAKERISYFEKKVNYRSEIETQTEESKEKEKEEEKSTETIGSEVETLNLQV
TTLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELNEKQELVYNNRKLELQVE
SMRSEIKMEQAKTEEEKSKLASLQLTHNRLLQEYNSALKMIEELQRKESEKVDKVVLQEV
NEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTVLRAQMEVYCSDFHAERAAREKIH
EEKEQLALQLAILLKENNAFEDGGSRQSLMEMQSRHGARTSDSDQQVYLVERGAEDRNWQ
QQQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgtcccaccaaccacttagctgcctgactgaaaagggggacagccccattgaaaccaca
ggaaatggacccccccatctagctcacccaagcctggacacgttcacaccagaggagctg
ctgcagcagatgaaagagctcctaactgagaatcatcagctgaaagaagccatgaagcta
aataatcaagctatgaaagggcgatttgaggagctttcagcctggacagagaaacagaag
gaagaacgccttttttttgagatccagagcaaagaagccaaagagcgcctaatggctttg
agtcatgaaaatgaaaaattgaaggaagaacttggaaaactaaagggcaaaacagaaagg
tcattcgaggaccccactggggaccccaaggtccccaaggcagaagcagaacaggaaatg
gaacagctgaagacccaggtggcacgccttcaagctgaaaaggcagatctgctgggcatt
gtgtctgaactgcaactcaagctgaactcaagcggcccctctgaagactcctttgttgaa
attaggatggctgaaggagaagcagatgtggcaatgaaagaattcaagactcgtcctggg
cgcacaagaactgagtctattgacatgagcaaatctgcagaaggtaccagaaattatttg
gagtttgaggaattaactgtgagccagctcatgctttgtctgagggaaggaaaccagaag
gtggagaaacttgaaattgccctcaaagaagccaaagaaagaatttcatattttgaaaag
aaagtcaattatcgttctgaaattgagacccagacagaggagagcaaagaaaaagagaaa
gaagaggagaaaagcacagaaaccattggaagtgaagtggaaacactgaaccttcaggtg
acaaccctgtttaaggagcttcaagaggctcatacaaaactcagtgaagctgagctaatg
aagaagagacttcaagaaaaatgccaggcccttgaaaggaaaaattctgcaaccccgtca
gaattgaatgaaaagcaagagcttgtttataataacagaaagttagagctacaagtggaa
agcatgcggtcagaaatcaagatggagcaagccaaaacagaagaagaaaagtccaagtta
gcctctctacagctgacacacaacaggcttcttcaagaatacaacagtgcattgaaaatg
attgaggagctacaaaggaaagagtcagaaaaagtggataaggtggtgctgcaggaagta
aatgaaaaactggaactggcagagaaggccttggcctccaagcagcttcagatggatgag
atgaagcagaccatagccaagcaggaggaggacctggaaaccatgactgttcttagggct
cagatggaggtgtactgttctgactttcacgctgaaagagcagcgagagagaagattcac
gaagaaaaggagcagctggccttgcagctggcgattttgctgaaagagaataatgctttt
gaagacggaggcagtaggcagtccttgatggaaatgcagagccgtcatggggcgagaaca
agtgactctgaccagcaggtttaccttgttgaaagaggagctgaggatagaaactggcag
caacagcaacaacggaatattccaattcattcttgccccaaatgtggagaagttctgccc
gacatagataccttacagattcatgttatggactgcatcatttaa

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