Equus caballus (horse): 100056689
Help
Entry
100056689 CDS
T01058
Symbol
OPTN
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
ecb
Equus caballus (horse)
Pathway
ecb04137
Mitophagy - animal
ecb04140
Autophagy - animal
ecb05014
Amyotrophic lateral sclerosis
ecb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100056689 (OPTN)
04137 Mitophagy - animal
100056689 (OPTN)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100056689 (OPTN)
05022 Pathways of neurodegeneration - multiple diseases
100056689 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100056689 (OPTN)
Membrane trafficking [BR:
ecb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100056689 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
100056689 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
100056689 (OPTN)
Xenophagy
Cargo receptors
100056689 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
FAZ1_C
Motif
Other DBs
NCBI-GeneID:
100056689
NCBI-ProteinID:
XP_005606979
Ensembl:
ENSECAG00000007747
VGNC:
21047
LinkDB
All DBs
Position
29:complement(22748076..22783430)
Genome browser
AA seq
574 aa
AA seq
DB search
MSHQPLSCLTEKGDSPIETTGNGPPHLAHPSLDTFTPEELLQQMKELLTENHQLKEAMKL
NNQAMKGRFEELSAWTEKQKEERLFFEIQSKEAKERLMALSHENEKLKEELGKLKGKTER
SFEDPTGDPKVPKAEAEQEMEQLKTQVARLQAEKADLLGIVSELQLKLNSSGPSEDSFVE
IRMAEGEADVAMKEFKTRPGRTRTESIDMSKSAEGTRNYLEFEELTVSQLMLCLREGNQK
VEKLEIALKEAKERISYFEKKVNYRSEIETQTEESKEKEKEEEKSTETIGSEVETLNLQV
TTLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELNEKQELVYNNRKLELQVE
SMRSEIKMEQAKTEEEKSKLASLQLTHNRLLQEYNSALKMIEELQRKESEKVDKVVLQEV
NEKLELAEKALASKQLQMDEMKQTIAKQEEDLETMTVLRAQMEVYCSDFHAERAAREKIH
EEKEQLALQLAILLKENNAFEDGGSRQSLMEMQSRHGARTSDSDQQVYLVERGAEDRNWQ
QQQQRNIPIHSCPKCGEVLPDIDTLQIHVMDCII
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccaaccacttagctgcctgactgaaaagggggacagccccattgaaaccaca
ggaaatggacccccccatctagctcacccaagcctggacacgttcacaccagaggagctg
ctgcagcagatgaaagagctcctaactgagaatcatcagctgaaagaagccatgaagcta
aataatcaagctatgaaagggcgatttgaggagctttcagcctggacagagaaacagaag
gaagaacgccttttttttgagatccagagcaaagaagccaaagagcgcctaatggctttg
agtcatgaaaatgaaaaattgaaggaagaacttggaaaactaaagggcaaaacagaaagg
tcattcgaggaccccactggggaccccaaggtccccaaggcagaagcagaacaggaaatg
gaacagctgaagacccaggtggcacgccttcaagctgaaaaggcagatctgctgggcatt
gtgtctgaactgcaactcaagctgaactcaagcggcccctctgaagactcctttgttgaa
attaggatggctgaaggagaagcagatgtggcaatgaaagaattcaagactcgtcctggg
cgcacaagaactgagtctattgacatgagcaaatctgcagaaggtaccagaaattatttg
gagtttgaggaattaactgtgagccagctcatgctttgtctgagggaaggaaaccagaag
gtggagaaacttgaaattgccctcaaagaagccaaagaaagaatttcatattttgaaaag
aaagtcaattatcgttctgaaattgagacccagacagaggagagcaaagaaaaagagaaa
gaagaggagaaaagcacagaaaccattggaagtgaagtggaaacactgaaccttcaggtg
acaaccctgtttaaggagcttcaagaggctcatacaaaactcagtgaagctgagctaatg
aagaagagacttcaagaaaaatgccaggcccttgaaaggaaaaattctgcaaccccgtca
gaattgaatgaaaagcaagagcttgtttataataacagaaagttagagctacaagtggaa
agcatgcggtcagaaatcaagatggagcaagccaaaacagaagaagaaaagtccaagtta
gcctctctacagctgacacacaacaggcttcttcaagaatacaacagtgcattgaaaatg
attgaggagctacaaaggaaagagtcagaaaaagtggataaggtggtgctgcaggaagta
aatgaaaaactggaactggcagagaaggccttggcctccaagcagcttcagatggatgag
atgaagcagaccatagccaagcaggaggaggacctggaaaccatgactgttcttagggct
cagatggaggtgtactgttctgactttcacgctgaaagagcagcgagagagaagattcac
gaagaaaaggagcagctggccttgcagctggcgattttgctgaaagagaataatgctttt
gaagacggaggcagtaggcagtccttgatggaaatgcagagccgtcatggggcgagaaca
agtgactctgaccagcaggtttaccttgttgaaagaggagctgaggatagaaactggcag
caacagcaacaacggaatattccaattcattcttgccccaaatgtggagaagttctgccc
gacatagataccttacagattcatgttatggactgcatcatttaa
DBGET
integrated database retrieval system