Equus caballus (horse): 100056924
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Entry
100056924 CDS
T01058
Symbol
STAU1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecb01009
]
100056924 (STAU1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100056924 (STAU1)
Protein phosphatases and associated proteins [BR:
ecb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100056924 (STAU1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100056924 (STAU1)
mRNA cycle factors
Stress granule specific factors
100056924 (STAU1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
100056924
NCBI-ProteinID:
XP_023482469
Ensembl:
ENSECAG00000012894
VGNC:
23669
LinkDB
All DBs
Position
22:complement(38319302..38373921)
Genome browser
AA seq
693 aa
AA seq
DB search
MSQVQVQVQNPSAALSGSQILNKNQSLLSQPLMSIPSTTSSLPSENAGRPIQNSALPSAS
ITSTSAAAVPSNMAHPKEKTPMCLVNELARFNKIQPEYKLLREQGPAHCKVFTVQLTLGD
QHWKAEGTSIKKAQHTAAAKALEGTKFPKPIVRPFRSEGRNPGIMRGPRQVPFKSVSRES
ITPTVELNALCMKLGKKPMYKPVDPYSRMQSTYNYNMRGGAYPPRYFYPFPVPPLLYQVE
LSVGGQQFNGKGKTRQAAKHDAAAKALRILQSEPPPERLEVNGRESEEENLNKSEISQVF
EIALKRNLPVNFESFPLKQVARESGPPHMKSFVTKVSVGEFVGEGEGKSKKISKKNAAIA
VLEELKKLPPLPTAERVKPRIKKKTKSIVRLQSSPEYGQGMNPISRLAQIQQAKKEKEPE
YMLLTERGLPRRREFVMQVKVGNHTAEGAGTNKKVAKRNAAENMLEILGFKVPQAQPAKP
ALKSEEKTPIKKPGDGRKVTFFEPGSGDENGTSNKEDEFRMPYLSHQQLPAGILPMVPEV
AQAVGVSQGHHTKDFTRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNIPSGHVPHG
PLTRPSEQLDYLSRVQGFQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDM
AALNILKLLSELDQQNTEMPRTGNGPMSVCGRC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagttcaagttcaagttcagaacccatctgccgctctctcagggagccaaata
ctgaacaagaaccagtctcttctctcacagcctttgatgagtattccttctactactagc
tctctgccctctgaaaatgcaggtagacctattcaaaactctgctttaccctctgcatct
attacatccaccagtgcagctgcagttccttctaacatggcacaccccaaagagaaaacc
ccaatgtgtcttgtgaatgagttagcccgtttcaacaagattcagcctgagtataagctt
ttgcgtgagcaaggtccagctcactgtaaggtgtttacagtacagctaacacttggagat
cagcactggaaagctgaaggaactagtattaaaaaagcccagcacacagctgctgccaaa
gctttggaaggaacaaaatttcctaaacctatagtccgcccttttcgtagcgaaggaagg
aatccaggtattatgcgtgggccaagacaggttcctttcaaaagtgtgtctagagaaagc
ataacccctactgtagagctaaatgcactgtgcatgaaacttggaaaaaaaccaatgtat
aagcctgttgacccttactctcggatgcagtccacctataactacaacatgagaggaggt
gcttatcccccaaggtacttttacccatttccagtaccacctttactttatcaagttgaa
ctttctgtgggaggacaacaatttaatgggaaaggaaagacgagacaggctgcgaaacac
gatgctgctgcaaaagccctgaggatcctgcagagcgagcccccgcccgagaggctggag
gtgaatggaagagaatcagaagaagaaaatctcaataagtctgaaataagtcaagtgttt
gagattgcacttaaacggaacttgcctgtgaattttgagtctttccctctgaaacaggtc
gcccgggagagtggcccaccccacatgaagagcttcgtgaccaaggtgtcggttggggag
tttgtgggggaaggtgaagggaagagcaagaagatttcaaagaaaaatgctgctatagct
gttctcgaggagctgaagaagttaccgcccctgcctacagctgagcgagtgaagcccaga
atcaaaaagaaaacaaaatccatagtcaggctacagagcagcccagaatatggccagggg
atgaacccaattagcagactggcccagatccagcaggcgaagaaggagaaggagccggag
tacatgctcctcacggagcgaggcctcccgcgccgcagggagtttgtcatgcaggtgaag
gtgggaaaccataccgcagaaggagcgggcaccaataagaaggtggctaaacggaacgcg
gccgagaacatgctggagatccttggtttcaaagtcccacaggctcagcccgccaaacca
gccctcaaatcagaggagaagacacccataaagaaaccaggggatggaagaaaagtaact
ttttttgaacctggctctggggatgaaaatgggactagcaataaagaggatgagtttagg
atgccttatcttagtcatcagcagctgcctgctggaattcttcccatggtgcccgaggtc
gcccaggccgtaggagtcagtcaaggacatcacaccaaagatttcactagggcagctccg
aatcctgccaaggccacggtaactgccatgatagcccgtgaattgttgtatgggggcacc
tcgcccacagccgagaccattttaaagaataacatcccttcaggccacgtaccccatgga
cctctcacaagaccctctgagcagctggattatctttccagagtccaaggattccaggtt
gaatacaaagacttccccaaaaacaacaagaacgaatttgtctctcttatcaattgctcc
tctcagccgcctctgatcagccacggcatcggaaaggatgtggagtcttgccacgatatg
gctgcactgaacattttaaagttgctctctgagttggaccaacaaaatacagagatgccg
aggacaggaaatggaccaatgtctgtgtgtgggaggtgctga
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