Equus caballus (horse): 100056993
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Entry
100056993 CDS
T01058
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ecb
Equus caballus (horse)
Pathway
ecb04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100056993 (SHANK3)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
Ank_5
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
100056993
NCBI-ProteinID:
XP_023487295
Ensembl:
ENSECAG00000011905
VGNC:
22953
LinkDB
All DBs
Position
28:47266531..47317975
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AA seq
1734 aa
AA seq
DB search
MDGPGSSAVVVRVGIPDLQQTKCLRLDPGAPVWAAKQRVLCALNHSLQDALNYGLFQPPS
RGRAGKFLDEERLLREYPPNLDTPLPYLEFRYKRRVYAQNLIDDKQFAKLHTKANLKKFM
DYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLENATDLLKVLRNGGAHLDFRT
RDGLTAVHCATRQRNAAALTTLLDLGASPDYKDSRGLTPLYHSALGGGDALCCELLLHDH
ARLGTTDENGWQEIHQACRFGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQESCAR
VLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKESDVVPFRETPSYAKRRRLAG
PSGLASPRPLQRSASDINLKGEVQPAASPGPSLRSLPHQLLLQRLQEEKDRDRDGDQEND
ISGPTAGRGSQSKISPSGPGGPGGPGPTPGPGPAPPAPPAPPPRGPKRKLYSAVPGRKFI
AVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRQYDTRH
ETREDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAILQKRDHEGFGFVLRGAKAETPIEE
FTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVALIRQGGNRL
IMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELASIRRRKGEKLDEI
LAAAAEPTLRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGPEKLPGSLRKGI
PRTKSVGEDEKLASLLEGRFPRSTSMQDTAREGRGIPPPPQTAPPPPPTAYYFDSGPPPA
FSPPPPPSRAYDTVRSSFKPGLEARLGAGATGLYDSAAPLGPLPYPERQKRARSMIILQD
SAPEAGDAPRPPPAATPPERPKRRPRPPGPDSPYANLGAFSASLFAPSKPQRRKSPLVKQ
LQVEDAQERAALAVGSPGPGGGSFAREPSPTHRGPRPSGLDYGPGDGPGLAFGGPGPGKD
RRLEERRRSTVFLSVGAIEGSSPSTDLPSLQPSRSIDERLLGPGATPGRDLLLPSPVSAL
KPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQAPSRSPTPVHSPDTD
RPGPLFVDVQARDSERGALASPAFSPRSPAWVPVPARREPEKAPREERKSPEDKKSMILS
VLDTSLQRPAGLIVVHATSNGQEPSGLGAEEEHPGTPELAPAPTQSAVVAEPLPSPRAQP
PGSTPTDSGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARIGLVPPPEEFANGVL
LATPLPGPGPSPTTVPGPASGKPSSEPPPAPESAADSGVEEADTRSSSDPHLETTSTIST
VSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKGPVTFRDPLLKQSS
DSELMAQQHHASAGLASAAGPARPRYLFQRRSKLWGDPVESRGLPGPEDDKPTVISELSS
RLQQLNKDTRSLGEEPAGGLGGLLDPAKKSPIAAARLFSSLGELSSISAQRSPGGPGGGA
SYPVRPGGRYPVARRAPSPVKPASLERVEGLGAGAGGAGRPFGLTPPTILKSSSLSIPHE
PKEVRFVVRSVSARSRSPSPSPLPSPAPGPGPGPGAPGPRRPFQQKPLQLWSKFDVGDWL
ESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIERALRQLEGS
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggacggccccgggtccagcgccgtggtcgtgcgcgtcggcatcccggacctgcagcag
acgaagtgcctgcgcctggatccgggcgcgcccgtgtgggccgccaagcagcgcgtgctc
tgcgccctcaaccacagcctccaggacgcgctcaactacgggcttttccagccgccctcc
cggggccgcgccggcaagttcttggacgaggagcggctcctgcgggagtacccgcccaac
ctggacacgcccctgccctacctggagtttcggtacaagagacgagtttatgcccagaat
ctcattgatgataagcagtttgcaaagcttcacacaaaggcgaacctgaagaagttcatg
gactacgtccagctgcacagcacggacaaggtggcccgcctgctggacaaggggctggac
cccaatttccacgatcctgactcaggagagtgtcctttgagccttgcggcgcagctggaa
aacgccacggacctgctgaaggtgctgaggaatggtggtgctcacctggacttccgcact
cgcgatgggctcactgctgtgcactgtgccacgcgccagcggaatgcggcggctttgacg
accctgctggacctgggcgcttcacctgactacaaggacagccgtggcctgacgcccttg
taccacagtgcgctggggggcggggatgccctctgctgtgagctgctcctccacgaccat
gctcggctggggaccactgacgagaacggctggcaggagatccaccaggcctgccgcttc
gggcatgtgcagcacctggaacacctgttgttctatggagccgacatgggggctcagaac
gcctcggggaacacagctctgcacatctgtgccctctacaaccaggagagctgtgctcgt
gtcctgcttttccgtggagccaacaaggatgtccgcaattacaacagccagacagctttc
caggtggccatcatcgcagggaactttgagcttgctgaggtcatcaagacccacaaagag
tcagatgttgtacccttcagggaaacccccagctatgcgaagcggcggcggctggctggc
cccagtggcctggcctcccctcgacctctgcagcgctcagccagtgacatcaacctaaag
ggtgaggtgcagccggcagcttctcctggaccctcgctgcgaagccttccccaccaactg
ctgctccagcggctgcaggaggagaaagaccgggaccgggatggtgaccaagagaatgac
atcagcggccccacagcaggcaggggcagccagagcaagatcagcccgagcgggcctggc
ggccccggcggccccggccccacgcccggccccggcccggcgccccccgcgcccccagcg
ccgccgccccggggcccgaagcggaaactttacagcgccgtccccggccgcaagttcatc
gccgtgaaggcgcacagcccgcagggcgagggcgagatcccgctgcaccgcggcgaggcc
gtgaaggtgctcagcattggggagggcggtttctgggaggggaccgtgaaaggccgcacg
ggctggttcccggccgactgcgtggaggaggtgcagatgagacagtatgacacaaggcac
gaaacccgggaggaccggacgaagcgacttttccgtcactacacggtgggctcctatgac
agcctcacttcacacagcgattatgtcattgacgacaaggtggccatcctgcagaaacgg
gaccatgagggctttggttttgtgctccggggggccaaagcagagacccccatcgaggag
ttcacgcccacgccagccttcccagcgctacagtatctcgagtcggtggatgtggagggt
gtggcctggagggccgggctgcgcacgggagacttcctcatcgaggtgaacggggtgaac
gtggtgaaggtcggacacaagcaggtggtggctctgatccgccagggcgggaaccgcctc
atcatgaaggttgtgtcggtgacaaggaagccagaagaagatggggctcggcgcagagcc
ccgccgccccccaagagggctcctagcaccacgctgaccctgcgctccaagtccatgacg
gctgagcttgaggaacttgcctccattcggagaaggaagggggagaaactggatgagatc
ctggcagccgctgcagagccaacactgaggccagacatcgcagatgccgactcaagagcc
gccactgtcaaacagcggcccactagtcggaggatcacccctgctgagatcagctcattg
tttgagcgccagggcctcccaggcccagagaagctgccgggctccttgcggaaggggatt
ccacggaccaagtctgtaggcgaggatgagaagctggcgtccctgctggagggccgcttc
ccgcggagcacttcgatgcaggatactgcccgcgagggccgcggcatcccgcccccgccg
cagaccgcgccgccgcccccgcccactgcctactacttcgactccgggccgccccccgcc
ttctcgccgccgcctccgccgagccgcgcctacgacactgtgcgctcgagcttcaagccc
ggcctagaggcgcgcctgggcgcgggggccacgggcctgtatgattccgccgcgcccctg
gggccgctaccctaccccgagcggcagaagcgcgcgcgctccatgatcatcctgcaggac
tcggcgcccgaggcgggcgacgcccctcggcccccgccagcggctaccccgccagagcgc
ccaaagcgccggccgcggccgccaggccccgacagtccctacgccaacctgggcgccttc
agcgccagcctcttcgcgccatccaagcctcagcgccgtaagagcccgctggtgaagcag
ctgcaggtggaggatgctcaggagcgtgcggccctggcagtgggcagccctgggcccggc
ggcggcagctttgctcgcgagccctccccgacacatcgcgggcctcgtccgagcggactc
gactatggccctggggacggccccgggctcgcattcggcggcccaggcccgggcaaggac
cgacggctggaggagcggcgccgctccaccgtgttcctgtcggtgggagccatcgagggc
agctccccaagcacggatctgccctccctgcagccctcccgctccatcgacgagcgcctt
ctggggcctggcgccacccctggccgagacctgctgctgccctctcctgtctctgctctg
aagccattggtcagcggcccgagccttgggccttcgggctccaccttcatccacccgctc
accggcaaacctctggaccccagctcgcccctggcccttgccctggctgcccgcgagcgg
gctctggcctcccaggcaccctcccggtcccccacgcctgtgcacagccctgacacagac
cgccctgggcccctgtttgtggatgtccaggcccgcgactctgagcgaggagccctggcc
tctccagcattctccccgaggagcccagcctgggttccagtgcctgctcgcagggagccg
gagaaagctcctcgggaggagcggaagtcacctgaggacaagaagtccatgatcctcagc
gtcctggacacgtccctgcagcggccagcaggccttattgtcgtgcatgccaccagcaat
gggcaggagcccagtgggctgggggctgaagaggagcacccgggcaccccagagctggcc
ccggcccccacgcagtcagcagtagtggcagagcccctgcctagcccccgggcccagccc
cctggcagcaccccgacagactctggcccagggcagggcagctcagaggaggagccagag
ctggtattcgctgtgaacctgccgcccgcccagctgtcctccagtgacgaggagaccaga
gaggagctggcccgcattggtctggtgccaccccccgaagagtttgccaatggggtcctg
ctggccaccccacttcctggcccaggtccctcacccaccacggtgccaggcccggcctca
gggaagccgagcagcgagccgccccccgcccccgagtctgctgcagactcaggggtggag
gaggccgacacacgcagctctagcgacccccacctggagaccacgagcactatctccaca
gtgtccagcatgtccaccctgagctctgagagcggggaactcaccgacactcacacctcc
ttcgccgacggacacacttttctactcgagaagccaccagtgcctcccaagcccaagctc
aagtccccgctggggaaggggccggtgaccttcagggacccactgctgaagcagtcctcg
gacagcgagctcatggcccagcagcaccatgcctctgctgggttggcctctgccgccggg
cctgctcgccctcgctacctcttccagagaaggtccaagctgtggggggaccccgtggag
agccgggggctccccgggcccgaagacgacaaaccaactgtgatcagtgaactcagctcc
cgtctgcagcagctgaacaaagatacacgctccctcggggaggagccggctggcggcctg
ggcggcctgctggaccctgccaagaagtcgcccatcgcggcagctcggctcttcagcagc
ctcggtgagctgagctccatctcagcacagcgcagccctgggggcccgggcggcggggcc
tcctacccggtgcggcccggcggccgctaccctgtggcgcggcgcgccccgagcccagtg
aagcccgcgtcgctggagcgggtggaggggctgggggcgggcgcggggggcgcggggcgg
cccttcggcctcacgcctcccaccatcctcaagtcgtccagcctctccatccctcacgag
ccgaaggaggtgcgctttgtggtgcgcagcgtgagcgcgcgcagccgctcgccctcgccg
tcgccgttgccctcgccagcgcctggccccggccccggccccggggcccccggcccgcgc
cggcccttccagcaaaagccgctgcagctctggagcaagttcgacgtgggcgactggctg
gagagcatccacttgggcgagcaccgcgaccgcttcgaggaccacgagatcgagggcgcg
cacctgcctgcgctcaccaaggacgacttcgtggagttgggcgtcacgcgcgtgggccac
cgcatgaacatcgagcgcgcgctcaggcagctggaaggcagctga
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integrated database retrieval system
