Equus caballus (horse): 100057119
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Entry
100057119 CDS
T01058
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ecb
Equus caballus (horse)
Pathway
ecb04140
Autophagy - animal
ecb04148
Efferocytosis
ecb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100057119 (VPS18)
04148 Efferocytosis
100057119 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100057119 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100057119 (VPS18)
Membrane trafficking [BR:
ecb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100057119 (VPS18)
Hops complex
100057119 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_Vps41
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
100057119
NCBI-ProteinID:
XP_001503547
Ensembl:
ENSECAG00000016476
VGNC:
24918
LinkDB
All DBs
Position
1:complement(149176279..149184728)
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AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTENSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEEVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLAGL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALNLYRETRERFRAFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGAVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARVKEAEGGAAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQHYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgaatacgaggactccctgtcccgctcagccgtcttgcagcct
ggctgccccagcgtgggcatcccccactcggggtatgtgaacgcccagctggagaaggaa
gtccccatcttcacgaagcagcgcattgactttaccccttccgagcggatcaccagtctt
gttgtctcctgcaatcagctctgcatgagcctgggcaaggatacactgctccgcattgac
ttgggcaaagcaaacgaacccaaccatgtggagctggggcgcaaggatgatgccaaagtt
cacaagatgttcctggaccatactggctctcacctgctgattgctctgagcagcactgag
gtcctctacgtgaaccgtaatggacagaaggtccggcccctggcgcgctggaaggggcag
ctggtggagagtgtgggctggaacaaggcactgggcactgagaacagcacaggccccatc
ctggtcggcactgctcaaggccagatcttcgaagcagagctctcagccagcgagggtggg
ctttttggccctgccccggatctctacttccgtccattgtacgtgctaaatgaagaaggg
ggtcccgcgcctgtgtgctcccttgaggccgagcggggccctgatggccgtggctttgtt
atcgccaccactcggcagcgcctcttccagttcataggccgagcagcagagggagctgag
gcccagggcttctcagggctctttgctgcctacgctgaccacccaccccctttccgtgag
ttccccagcagtctgggctacagcgagttggccttctatacccctaagttgcgctctgca
ccccgggccttcgcctggatgatgggggatggcgtgctgtatggagcgttggactgtggg
cgtcctgactccctgctgagtgaggagcgagtctgggagtacccagaggaggtaggtcct
ggggccagcccacccctggccatcgtcctcacccagttccacttcctgctgctgctggcg
gaccgggtggaggcggtgtgcacgctgacagggcaggtggtgctgcgggaccacttcctg
gagaagtttgggccgctgaagcacatggtgaaggactcctccacgggccacctgtgggcc
tacaccgaacgggctgtcttccgctaccatgtgcagcgggaggcccgagatgtctggcgc
acctacctggacatgaaccgcttcgacctggccaaagagtattgtcgagagcggccagac
tgcctggacacggtcctggcccgggaggctgatttctgctttcgccagcgtcgttacctg
gagagcgcccgctgctacgccctgacccagagctactttgaggagatcgccctcaagttc
ttggaggcccgacaggaggaggctctggctgagttcctgcagcgaaaactggctggtttg
aagccagccgagcgtacccaggccacgctgcttaccacctggctcacggagctctacctg
agccggctcggggctctgcagggtgatccggaagccctgaacctctaccgggagacacgg
gagcgcttccgtgctttcctcagcagcccccgccacaaggagtggctcttcgccagccgg
gcctccatccacgagctgctcgccagccatggggacacggaacacatggtgtactttgct
gtgatcatgcaggactatgagcgggtggtggcataccactgccagcatgaggcctacgag
gaggcccttgccgtgcttgcccgccatcgtgaccctcagctcttctacaagttctcgccc
atcctcatccgtcacatcccccgccagctggtggacgcctggattgagctgggcagccgg
ctggatgcccggcagctcatccctgccctggtaaactatagccagggcggcgaggcccag
caggtgagccaggccatccgctacatggagttctgcgtgaacgtgctgggcgagactgag
caggccattcacaattacctgctgtctctgtatgcccgaggccagccagcctctctgctg
gcctacctcgagcaggccggggccagcccgcaccgcgtgcattacgacctcaagtatgcg
ctgcggctctgcgctgagcacggccaccaccgtgcttgtgttcatgtctacaaggtcctg
gagctgtatgaggaggctgtggatctggcccttcaggtggacgtggacctggctaagcag
tgtgctgacttgcccgaggaagatgaggaactgcgcaagaagctgtggctgaagatcgca
cggcacgtggtgcaggaggaggaagatgtgcagacggccatggcctgcctggccagctgc
cccctgctcaagattgaggatgtgctgcccttctttccggactttgtcaccatcgaccac
tttaaggaggcgatctgcagctcgcttaaagcctacaaccaccacatccaggagctgcag
cgggagatggaggaggccacagccagcgcccagcgcatccggcgagacctgcaggagctg
cggggccgctatggcgccgtggaaccccaggacaaatgtgccacctgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggtcacatgttccatgctgactgcctgctg
caggccgtgcggcctggcctgccagcctacaagcaggcccggctcgaggagctgcagcga
aagctaggggccgccccaccccctgccaagggctctgcccgggtgaaggaggcggagggt
ggggctgctgctggggggcccagccgggaacagctcaaggctgaccttgatgaactggtg
gccgctgagtgtgtgtactgtggggagctgatgatccgctctatcgaccggcccttcatc
gacccccagcactacgaggaggagcacctcagttggctatag
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