Equus caballus (horse): 100057208
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Entry
100057208 CDS
T01058
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04151
PI3K-Akt signaling pathway
ecb04510
Focal adhesion
ecb04512
ECM-receptor interaction
ecb04820
Cytoskeleton in muscle cells
ecb04974
Protein digestion and absorption
ecb05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100057208 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100057208 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100057208 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100057208 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100057208 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100057208 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ecb00535
]
100057208 (COL9A1)
Proteoglycans [BR:
ecb00535
]
Extracellular matrix (ECM) proteoglycans
Others
100057208 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100057208
NCBI-ProteinID:
XP_023480908
Ensembl:
ENSECAG00000011035
VGNC:
16751
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All DBs
Position
20:complement(63022275..63104970)
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AA seq
919 aa
AA seq
DB search
MKNFWKLPVFFFVCSFLGPRARAAVKRRPRFPVNSNSNGENELCPKVRIGQDDLPGFDLI
SQFQVDKAASSRAIQRIVGSTALQVAYKLGNNVDFRIPTRHLYPSGLPEEYSFLTTFRMT
GSTLKKNWSIWQIQDSSGKEQVGVKINGQTKSVSFSYKGLDGSLQTAAFSNLPSLFDSQW
HKLMIGVERSSATLFVDCNKIESLPIKPRGPIDINGFAVLGKLADNPQVSVPFELQWMLI
HCDPLRPRRETCHELPARITTTDQQIGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGPPG
PPGPPGEPGKPGAPGRPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIPGP
PGPPGAAGLPGELGRVGPAGDPGKRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRSGY
PGIPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEPGEAGAQGPPGAQGLRGITGIAGAKGE
KGARGFDGEPGPQGLPGAPGDQGQRGPPGEAGPKGERGVPGSRGIPGLPGSKGDTGLPGV
DGRDGIPGMPGTKGEPGKPGPPGDVGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQLGN
SGKPGQQGPPGEVGPRGPRGLPGSRGEIGPVGPPGPPGKLGSLGSPGLPGLPGPPGLPGM
RGDRGVVGEPGPKGEQGASGEEGETGERGELGDIGLPGPKGSAGNPGEPGSRGPEGSRGL
PGEEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVMQEHLAEMAASLK
RPDSGASGLPGRPGPPGPPGPPGENGFPGQMGPRGLPGIKGPPGALGLKGPKGDLGERGE
RGPPGRGPKGLPGATGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGFCE
PASCTLQAGQRAFSKGPSK
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttctggaaacttccggttttcttctttgtatgcagtttcctgggtccccgg
gcacgtgcggctgtcaagcgtcgcccaaggttccctgtcaattcaaattctaatggtgaa
aatgaactctgtccaaaggtcaggattggccaagatgatttaccagggtttgacctgatt
tctcagttccaggttgataaagcagcatccagtagagcgatccagaggatcgtgggatca
actgcattacaagtggcttacaaactgggaaataatgtagacttcaggattccaacgagg
catttatatcccagtggattgcctgaagaatactcctttctaactacttttcggatgact
gggagcacacttaaaaagaactggagcatttggcagattcaggattcctcagggaaggag
caagttggcgtgaagattaatggccaaacgaaatctgtctcattttcctacaagggattg
gatggaagtctccaaaccgcagccttttcgaatttgccctccttgtttgactcccagtgg
cataagctcatgattggcgtggagaggagtagtgctactctctttgttgactgcaacaaa
attgagtccttacccatcaagccaagaggcccaatcgacatcaacggctttgctgtgctg
ggaaaactcgcagataatcctcaagtttctgttccatttgaacttcagtggatgctgatc
cactgtgacccactgcgacccaggagagaaacgtgccatgagctgccagccaggataacg
acaactgaccagcagataggccccccgggcgagcaggggcccccggggcccccgggcccc
cctggagttccaggcatcgacggcatcgacggtgaccgaggtccgaagggtcccccgggc
cccccgggtccacctggagagccgggaaagccgggagctccgggcaggccgggcacgccg
ggcgccgacggattaacaggacctgacggatcccctggctctgttggaccaagaggacaa
aaaggagaacctggtgttcctggatctcgtggatttccaggccgtggcattcctggaccc
cctggtccccctggggcagcaggactccctggagagcttggccgcgttgggcccgcgggt
gaccctgggaaaagaggaccaccgggcccccctggccccccaggacccagcggaacaatt
ggctttcatgatggcgatccattgtgtcccaattcctgtccacctggtcgctcaggatat
ccaggcataccaggcatgcggggtcataagggggctaaaggagaaattggagaacctgga
agacaaggtcacaagggtgaagaaggtgaccagggagaaccgggagaagccggagctcaa
ggacctccaggagctcaaggactgagaggcatcaccggcatagctggagccaaaggagaa
aaaggcgctcgaggcttcgatggggaacctgggcctcagggccttcctggtgcacctggt
gaccaaggacagcgagggcctccaggggaagcaggtcccaagggagagaggggggttcca
ggttctagagggattcctggcctcccggggtccaaaggagacacgggcttgcccggtgtg
gatggccgtgacgggattcctgggatgccgggaacgaagggtgagccagggaaacctggg
cctcctggtgacgtgggactgcaggggttacctggcgtgcctggaattcctggtgcaaag
ggtgttgccggtgaaaagggcaacacaggtgctcccgggaagcctggccagttggggaat
tcaggcaaaccgggccaacaggggccaccaggagaggtgggaccccgaggaccccgaggt
cttcctggcagccgaggagaaataggaccagttggacccccaggcccaccaggtaaactg
ggttctctcggtagccctggcctccccggcttgcctggcccccctggactgcctgggatg
agaggtgacaggggtgtagtcggtgaacctggtccaaagggtgagcagggtgcctctggt
gaagaaggtgaaacaggagaaaggggtgaacttggagatataggattacccggcccaaag
ggatctgcgggtaaccctggggagcctggctcgagggggcctgaaggaagtcgggggctt
cctggagaggaaggaccaagaggacctcccggaccgagaggcgtgcagggagaacagggc
gccaccggcctgcccggtgtccagggccctccaggtagagctccaacagaccagcacatc
aagcaggtttgcatgagagtgatgcaagagcatcttgctgagatggctgctagtctcaag
cgtccagactccggggcctccggcctccctggcaggcctggtcccccgggtccccctgga
ccccctggagagaatggtttcccaggccagatgggacctcgtggcctcccaggcattaaa
gggccccccggcgctctaggtttgaagggacctaaaggtgacttgggagaaagaggggaa
cgtggccctccaggaaggggtccaaaaggtcttcccggagctacgggtctcccaggtgac
ccaggtcctgccagctatgggaggaatggccgggatggtgagcgaggccccccaggggtg
gcaggaattcctggtgtccctggtcccccaggacctcctggccctcctggtttctgcgag
ccagcctcctgcaccttgcaggctggtcagcgagcattcagcaaagggcccagtaagtga
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