Equus caballus (horse): 100057347
Help
Entry
100057347 CDS
T01058
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
ecb
Equus caballus (horse)
Pathway
ecb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100057347 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100057347 (CSTF2)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100057347 (CSTF2)
U7-dependent histone pre-mRNA processing factors
100057347 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100057347
NCBI-ProteinID:
XP_023490090
Ensembl:
ENSECAG00000009325
VGNC:
16920
UniProt:
A0A9L0TTK5
LinkDB
All DBs
Position
X:83661002..83684641
Genome browser
AA seq
597 aa
AA seq
DB search
MAGLTARDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLIAGNPQPVHSTGPGSGSNVSMNQQNPQAPQAQSLGGMHVN
GAPPLMQASMQAGVPTPGQMPASVTGPGPGALAPGGGMQAQVGMPGSGPVSMERGQGTLQ
HSPVGPAGPASIERVQVPMQDPRAAMQRGPLPANVPTPRGLLGDAPNDPRGGTLLSVTGE
VEPRGYLGPPHQGPPMHHVPGHDSRGPPPHEMRGGPLAEPRPLMAEPRGPMLDQRGPPLD
GRGGRDPRGMDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGM
EARSMDTRGPVPGPRGPIPSGIQGPSPINMGAVGPQGSRQVPVMQGAAMQGASIQGGGQP
GGFSPGQNQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgactgcgagggaccctgcggtggatcgttctctgcgttcggtgttcgtg
gggaacattccatatgaggctactgaagagcagttaaaggacatcttttctgaggttgga
cctgttgttagtttcagattggtatatgatagggagacaggaaagccaaagggttatggc
ttctgtgaataccaagaccaagagacggctcttagtgccatgcgaaacctgaatgggcgt
gaattcagcgggagagcacttcgagtggacaatgctgccagtgaaaagaacaaagaagaa
ctaaagagccttggcactggtgcccctgtcattgaatcaccctatggagagaccatcagt
cctgaggatgcccctgagtccattagcaaagcagttgccagtcttccaccagagcagatg
tttgagctgatgaaacaaatgaagctctgtgttcagaacagtccccaggaagcacggaac
atgttacttcagaaccctcaactggcttatgctttgctacaagcacaggtagtgatgaga
attgtggatccagagattgccctgaaaattctgcatcgccagacaaatatcccaacgctg
attgctggcaaccctcagccagtccacagcactgggcctggctcaggatccaatgtgtca
atgaaccagcagaatcctcaggcccctcaagcccagtctttgggtggaatgcacgtcaat
ggtgcacctcctcttatgcaggcttctatgcaagctggagttccaacaccagggcaaatg
ccagcatctgtgacaggacctggccctggtgccttagctcctggaggaggaatgcaggcc
caagttggaatgccaggaagtggaccagtgtccatggagcggggacaaggaaccctacag
cactcgcccgtgggacccgccgggcctgcatcaattgagcgagttcaagtgccgatgcaa
gaccccagagcagcgatgcagcgtgggcccttgcctgccaacgtcccaactcctcggggt
ctgttaggagacgctccgaatgacccacgtggaggcactttactttctgtgactggagaa
gtggaacctagaggttacctgggaccacctcatcagggtccacccatgcaccatgtccct
ggccatgacagccgtggcccacccccacatgagatgaggggagggccattagccgagccc
agacctctaatggcagagccaagaggacccatgctagatcagaggggtccacccttggat
ggcagaggtggaagagatccccgaggcatggatgcacgagggatggaggcacgagccatg
gaggcaagaggattagatgccagaggtttggaggcccgtgcaatggaagcccgtgcaatg
gaggcccgtgcaatggaggcccgtgcaatggaggcccgtgcaatggaagtcagagggatg
gaggccagaagcatggatacaaggggcccagtgcctggccctagaggccctatacctagt
ggaattcagggtcccagtccaattaacatgggggcagttggaccccagggatccagacag
gtcccagtcatgcagggagcagccatgcaaggagcaagcattcagggtggaggccagcct
ggtggctttagtcctggccagaaccaagtcactccacaggaccatgagaaagctgctttg
atcatgcaggttcttcaactgactgcagaccagatcgccatgctgcctcctgagcaaagg
cagagtatcctgatcttaaaggaacagatacagaaatccactggagcaccttga
DBGET
integrated database retrieval system
