Equus caballus (horse): 100057726
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Entry
100057726 CDS
T01058
Symbol
TAF4
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ecb
Equus caballus (horse)
Pathway
ecb03022
Basal transcription factors
ecb05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100057726 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100057726 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100057726 (TAF4)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100057726 (TAF4)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100057726 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
100057726 (TAF4)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100057726 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
100057726
NCBI-ProteinID:
XP_001491025
Ensembl:
ENSECAG00000023048
VGNC:
51619
LinkDB
All DBs
Position
22:complement(48904462..48980114)
Genome browser
AA seq
1048 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRAPEARAAAAGALGN
HVGAGAVPAEGAPAAAPEPPPAGRARRGLSAGGRRPGPRPHRAAPLVPAGPAAKLSALEA
GRGRAPGRAGACAPGAGAAAAPEPAAKPAARNGPPGGPGAAQTLNGSAALGNSLRAAAAP
AVSLLHNGPAPAPPPPKPAAATVIQTPPFLGAXAAPAPRAPSPPAPAAPAAPPAPAAAPP
PPAAASLARPPGHXAGPPAAAQNGGSAAPPAPAPPAPVPAPPAPAPAANSQPGPAAAPAQ
VAKADSPKTALPPAPPPPQTLAASCPAGAGAGMILGPTMQGALPAAAAAGLPPPAPGTPT
GLPKGSAGAVTQSLPRTPSAPASGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLV
RSENGQLLMIPQQALAQMQAQAHAQAQPQTTMAPRPATPTSAPPVQISTVQAPGTPIIAR
QVTPTTIIKQVSQAQTTVQPTTALQRSPGVQPQLVLGGAAQTASLGTATAVQTGTPQRTV
PGATTTSTAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAED
FTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPPPASQATTALTAVV
LSSSVQRTAGKTAATVTSALQPPVISLTQPTQVGVGKQGQPTPLVIQQPPKPGALIRPPQ
VTLTQTPMVALRQPHNRIVLTTPQQIQLNQLQPVPVVKPAVLPGTKALSTVSAQAAAAQK
NKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLLPAP
LQRRILEIGKKHGITELHPDVVSYVSHATQQRLQSLVEKISETAQQKNFSYKDDDRYEQA
SDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELA
QMRQRDANLTALAAIGPRKKRKVDSPGPGSGTEGAGPGSAVPGSSGVGTPRQFTRQRITR
VNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccccgcgcgcccgaggcgcgggccgcggccgccggcgcgctcgggaac
catgtcggagccggagccgtgccggccgagggcgcgcccgcagcggcgccggagccgccc
cccgcaggtagagcgcggcgcggcctgagcgcgggcgggcgccggccgggcccgcgtcct
caccgcgccgccccgcttgtccccgcagggcccgccgcgaagctgagcgcgctcgaggcc
ggccggggccgggcgccggggcgggccggggcctgcgcgccgggagccggggccgcggcc
gcgcccgagcccgccgccaagcccgccgcccgcaacggcccgcccggcggccccggcgcc
gcgcaaactttgaatgggagcgccgcgctggggaactcgctccgcgccgccgccgcacct
gctgtcagcctgctccacaacgggcccgcgcccgcgccgccgccgcccaagcccgccgcc
gccactgtcatccagacgccgcccttcctcggcgccnccgccgcgcccgcgccccgcgcc
ccctcgcccccagcgcccgccgcgcccgccgcgccccccgcgcccgccgccgccccgccg
ccgcccgccgccgccagcctggcccggccgcccggccacncggccggacccccggcggcc
gcgcagaacggcggcagcgccgcgccccccgcgcccgcgccccccgccccggtccccgcg
ccccccgcccccgcgcccgccgccaacagtcagcccgggcccgccgcggcgcccgcgcag
gtggccaaggccgactcgcccaagaccgcgctgccgccggctcccccgccgccgcagacc
ctggcggccagctgcccggccggcgcgggggccggcatgatcctcgggccaactatgcaa
ggggcgctgcccgccgccgccgccgccggcctcccgccgccggcccccggcacccccacc
gggctgcccaagggctcggccggcgcggtgacccagagcctgcccaggacgccctcggcc
cccgccagcgggatccgggccacgctgacgcccacggtcctcgcccctcgcctgccgcag
ccgcctcagaacccgaccaacatccagaacttccagctgcccccaggtatggtcctcgtg
cggagcgagaatgggcagttgttaatgattcctcagcaggccttggcccagatgcaggcc
caggcccatgcccaggcccagcctcagaccaccatggcaccccgtcccgcaacccccacc
agcgcccctcctgtccagatctctaccgtccaggcacctgggacccctattattgcacgg
caggtgaccccaacgaccataattaaacaagtgtctcaggcccagacgacggtacagccc
accacagcattgcagcgctcgcccggagtgcagcctcagcttgttctgggcggtgctgcc
cagacagcttccctcgggacggccacggctgttcagacggggacacctcagcgaacggtc
ccaggggccaccaccacctccacagctgccacggaaactatggaaaacgtgaagaaatgt
aaaaattttctatctacgttaataaaactggcttcatctggtaaacagtctacagagacg
gccgctaatgtgaaagaactagtacagaatctactggatggaaaaatcgaagcagaagat
ttcactagtaggttataccgagaacttaattcttcacctcaaccttaccttgtgcctttc
ctgaagaggagcttgcccgccttgagacagctgacccccgactccgcagccttcatccag
cagagccagcagcagccgccgccagcctcacaggctaccactgcgctcacggccgtggtg
ctgagcagctcggtgcagcgcacagccgggaagacggcagccaccgtgaccagcgccctc
cagccccctgtcatcagcctcacgcagcccacacaggttggcgttggcaagcaggggcag
cccacgccactggtgatccagcagccgcccaagcctggagcgctgatccgccccccgcag
gtgacgttgacgcagacgccgatggtggccctacggcagccacacaaccgcatcgtgctc
actacaccccagcaaattcagctgaaccagctgcagccagtccctgtggtgaaacctgct
gtgttacccggaaccaaagctctttctactgtatcggcacaagccgctgctgctcagaaa
aataaactcaaggagcccgggggaggctcgtttcgggacgatgatgacattaatgatgtt
gcgtcgatggctggagtaaatctatcagaagaaagtgcgagaatattagccacaaactct
gagttagtgggcaccctaacgcggtcctgtaaagatgaaaccttcctcctcccagcgcct
ttacaaagaagaatattagaaataggtaaaaagcacggcataacggaattgcatccagac
gtggtcagctacgtgtcacacgccacacagcagaggctgcagagccttgtagagaaaata
tcagagacggctcagcagaagaacttctcttacaaggatgatgacagatatgagcaggca
agcgatgttcgggctcagctcaagtttttcgaacagcttgatcaaattgaaaaacagagg
aaagatgaacaggaaagagaaattttaatgcgagcagcaaagtctcgatccagacaagaa
gacccagaacaattaaggttgaaacagaaggcaaaagagatgcagcaacaagaactggcg
cagatgaggcagcgagatgccaacctcacagcactagccgcgatcgggcccaggaaaaag
aggaaagtggactctccaggcccgggctcgggcacagagggcgcgggcccgggctcggcg
gtcccaggcagctccggcgtcggaacccccagacagttcacgcggcaaaggatcacgcgg
gtcaacctcagggacctcatattttgtttagaaaatgagcgtgagacaagccattcactg
ttgctctacaaagcattccttaagtag
DBGET
integrated database retrieval system
