Equus caballus (horse): 100057784
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Entry
100057784 CDS
T01058
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100057784 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100057784 (LSM1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100057784 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
100057784 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
100057784
NCBI-ProteinID:
XP_001493258
Ensembl:
ENSECAG00000010461
VGNC:
19815
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All DBs
Position
27:7584653..7593769
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AA seq
133 aa
AA seq
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MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTRLEAEKLKVQALKDR
GLSLPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgcccggcactgccagcctcatcgaggacatcgacaaaaagcacttggtc
ctgcttcgagatggaaggacactgataggctttttaagaagcattgatcaatttgctaac
ttagtgctgcatcagactgtggagcgtattcacgtgggcaagaagtacggcgatattcct
cgagggatttttgtagtcagaggagaaaatgtggtcctactaggagaaatagacttggaa
aaggagagtgacacacccctccagcaagtgtctattgaagagatcttggaagaacaaagg
gtggaacagcagaccaggctggaagccgagaagctgaaagtgcaggctctgaaggatcga
ggtctgtcccttcctcgcgcagatactcttgatgagtattag
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