Equus caballus (horse): 100057871
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Entry
100057871 CDS
T01058
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
ecb
Equus caballus (horse)
Pathway
ecb03082
ATP-dependent chromatin remodeling
ecb05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100057871 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100057871 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100057871 (SS18L1)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100057871 (SS18L1)
GBAF(ncBAF) complex
100057871 (SS18L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100057871
NCBI-ProteinID:
XP_023482628
Ensembl:
ENSECAG00000018310
VGNC:
23604
LinkDB
All DBs
Position
22:49033781..49066613
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDHQSKGKTAECAQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHSQGSLSDAIGTGLPASSLLQ
GQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGTGPGYSHSGPASQSVPLQGQGAIGNYV
SRANINMQSNPVSMMHQQAASSHYNSAQGGSQHYQGQSSIAMMGQSGQGSSMMGQRPMAP
YRPSQQGSSQQYLGQEEYYGEQYGHGQAAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRS
FEESTQHYYESGNSQYSQQQAGYQQGAAQQQTYPQQQYPSQQGYPGQQQGYGPAQGAPSQ
YSSYQQGQSQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggccttcgcgtccgcacggccgagaggcaaaggggaggtcacacagcaaacc
atccagaagatgctggacgagaaccaccatctgatccagtgcatcctggaccaccagagc
aagggcaagacagccgagtgtgcccagtaccagcagatcctgcaccggaacctggtctac
ctggccacgatcgcagactccaaccagaacatgcagtccctgctccccgccccgccaacc
cagaacatgaacctgggccccggagcgctgtcccagagcggctccagccagggcctgcac
tcccagggcagcctcagcgacgccatcggcacaggcctgcccgcatcctccctcttgcag
ggccagatcggcaatggtccgaaccacgtgtccatgcagcagacggcacagagcactctg
cctaccacctccatgagcatgtcgggcagcggccatggcacggggcctggctacagtcac
tcaggacccgcctcgcagagtgtgcccctgcaggggcaaggcgccattggcaactatgtg
tctcgggccaacatcaacatgcagtccaacccagtgtccatgatgcaccagcaggcagcc
tcatcccactacaactcggcacagggcgggagccagcactaccagggccagtcgtccatc
gccatgatgggccagagcggccagggcagcagcatgatggggcagcggcccatggcaccc
taccggccctcgcagcaaggctcgtcccagcagtacctgggccaggaggagtactacggc
gagcagtacggccacggccaggctgccgcggagcccatgggccagcagtactaccccgac
gggcatggtgattacgcctaccagcagtcgtcctacacggagcagagctacgaccggtcg
ttcgaggagtccacacagcactactatgagagcggaaactcccagtacagccagcagcag
gcggggtaccagcagggcgcggcgcagcagcagacctacccccagcagcagtaccccagc
cagcagggctaccctgggcagcagcaaggatacgggcctgcccagggagccccctcccag
tactccagctaccagcaaggacagagccagcagtatggaagctacagagcgtctcagacg
ggcccatccgcccagcagcagcggccttacggctatgagcagggccagtatggaaattac
cagcagtaa
DBGET
integrated database retrieval system
