Equus caballus (horse): 100057912
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Entry
100057912 CDS
T01058
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100057912 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100057912 (CNOT6)
Enzymes [BR:
ecb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100057912 (CNOT6)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100057912 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100057912 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
100057912
NCBI-ProteinID:
XP_005599219
Ensembl:
ENSECAG00000019325
VGNC:
16678
UniProt:
A0A9L0RXI4
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Position
14:complement(1293910..1360262)
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AA seq
557 aa
AA seq
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MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYLEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLQSSVLGEFGAIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPSRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctcggaggatgtacacaattatgtcctcc
gaggaagcagcaaatggaaagaaatcacattgggcagagcttgaaataagtggaaaagta
agaagcttaagctcatctttgtggtcactaactcacctgacagctttgcatctgagtgac
aattccctgtcccgtattccttcagacattgccaagcttcacaatctggtgtatctggac
ctgtcttctaataaaatccggagtttaccggcagaactcggaaacatggtatcactcagg
gaactccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccacttacccaagatatattgaacctctat
ttggaaccagatggaacaagaaggctactgaactatttgcttgataatttggcaggtact
gcaaaaagaatttcaacagaacaaccacctccaagatcttggattatgttacaagaacca
gacagaacaaggcctactgccttgttttctgtcatgtgctacaatgttctttgtgataaa
tacgcgacccggcagttatacggctactgtccatcatgggcgctaaactgggactacagg
aaaaaggccattattcaagaaatcttgagctgcaatgctgatatcgtaagtcttcaggag
gttgaaacagaacagtattacagtttttttctggtagaactgaaagaacgtggctataat
ggattctttagtcctaaatctagagctaggacaatgtcagaacaagaaagaaaacatgtt
gatggctgtgcaatattcttcaagacagaaaaatttactttggttcagaaacacactgtt
gaatttaatcagctagcgatggcaaattcagaagggtctgaagctatgctgaacagagtc
atgacaaaagataacattggagttgcagtactgctagaacttcgaaaggaattgattgaa
atgtcatctggaaaaccacatctcggaacagaaaaacaactgattcttgtggctaatgct
catatgcattgggaccctgaatactctgatgtgaagttggttcagacaatgatgttcctc
tcagaagtgaagaacattattgacaaagcctcacggagcctccagtccagtgtgttggga
gagtttggagctattccactggtgttgtgtgcagatcttaattctttgccagactctggt
gttgtagaatatttgagcactggtggagtagaaacaaaccataaagactttaaggagctg
agatataatgaaagtcttacaaacttcagctgcaatgggaaaaatgggacgaccaatggc
aggatcacgcatgggttcaagttaaagagtgcctacgagagtggcctgatgccctacacg
aactacaccttcgatttcaagggtataattgactacatcttttactctaaacctcagctg
aacactttaggcatcctgggacctctggatcaccattggctagttgagaataatatcagc
ggctgcccacacccactcatcccctctgatcacttctcactttttgcacaactggagctc
ttactgcctttcctgccccaagttaacggcattcaccttcccagcaggaggtag
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