KEGG   Equus caballus (horse): 100057913
Entry
100057913         CDS       T01058                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
ecb  Equus caballus (horse)
Pathway
ecb03013  Nucleocytoplasmic transport
ecb04141  Protein processing in endoplasmic reticulum
ecb04150  mTOR signaling pathway
ecb05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100057913 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100057913 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    100057913 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100057913 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecb03019]
    100057913 (SEC13)
   04131 Membrane trafficking [BR:ecb04131]
    100057913 (SEC13)
Messenger RNA biogenesis [BR:ecb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100057913 (SEC13)
Membrane trafficking [BR:ecb04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    100057913 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    100057913 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    100057913 (SEC13)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_EML NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 100057913
NCBI-ProteinID: XP_001493649
Ensembl: ENSECAG00000020459
VGNC: 22783
LinkDB
Position
16:8127821..8156432
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLVKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSTSVTEGQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtcagtaattaacactgtggacacctcccatgaggacatgattcacgatgcacag
atggactactatggcacccgcctggcaacctgctcgtcagacaggtctgtcaaaatcttc
gacgtgcgcaacggagggcagatcctcattgccgacctcaggggtcatgagggtcctgtg
tggcaggtggcctgggcccaccccatgtatggcaacatcctggcatcctgctcctatgac
cggaaagtcattatctggaaagaggaaaatggcacctgggagaagacgcacgagcacacg
ggacatgactcctcagtaaactctgtgtgctgggccccccatgactacggcctgatccta
gcctgtgggagctctgacggggccatctccctgctgacctacactggggagggccagtgg
gaagtgaagaagatcaacaatgctcacacgattggctgcaatgccgtcagctgggcccct
gctgttgtgcctggaagcctcatagaccagccatcggggcagaagcccaactacatcaag
aagtttgcgtcgggcggctgtgacaacctcgtcaagctgtggaaggaggaggaggatggc
cagtggaaggaggagcagaagctggaagcacacagtgactgggttcgagacgtggcctgg
gccccctccattggcctgcccaccagcaccatcgccagctgctcccaggatggtcgtgtg
ttcatttggacctgtgacgatgcctcgggcaatacatggtcccccaaactgctacacaag
ttcaatgatgttgtgtggcacgtgagctggtccatcacagccaacatcctggccgtctca
ggcggagacaataaggtgaccctgtggaaagagtctgtcgacgggcagtgggtatgcatc
agtgatgtcaacaagggccagggttccgtgtccacttcagtcacagagggccagcagaat
gagcagtga

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