Equus caballus (horse): 100057913
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Entry
100057913 CDS
T01058
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
KO
K14004
protein transport protein SEC13
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb04141
Protein processing in endoplasmic reticulum
ecb04150
mTOR signaling pathway
ecb05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100057913 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100057913 (SEC13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100057913 (SEC13)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100057913 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100057913 (SEC13)
04131 Membrane trafficking [BR:
ecb04131
]
100057913 (SEC13)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100057913 (SEC13)
Membrane trafficking [BR:
ecb04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100057913 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100057913 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
100057913 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_RIG_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_EML
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
100057913
NCBI-ProteinID:
XP_001493649
Ensembl:
ENSECAG00000020459
VGNC:
22783
LinkDB
All DBs
Position
16:8127821..8156432
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AA seq
322 aa
AA seq
DB search
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLVKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSTSVTEGQQNEQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcagtaattaacactgtggacacctcccatgaggacatgattcacgatgcacag
atggactactatggcacccgcctggcaacctgctcgtcagacaggtctgtcaaaatcttc
gacgtgcgcaacggagggcagatcctcattgccgacctcaggggtcatgagggtcctgtg
tggcaggtggcctgggcccaccccatgtatggcaacatcctggcatcctgctcctatgac
cggaaagtcattatctggaaagaggaaaatggcacctgggagaagacgcacgagcacacg
ggacatgactcctcagtaaactctgtgtgctgggccccccatgactacggcctgatccta
gcctgtgggagctctgacggggccatctccctgctgacctacactggggagggccagtgg
gaagtgaagaagatcaacaatgctcacacgattggctgcaatgccgtcagctgggcccct
gctgttgtgcctggaagcctcatagaccagccatcggggcagaagcccaactacatcaag
aagtttgcgtcgggcggctgtgacaacctcgtcaagctgtggaaggaggaggaggatggc
cagtggaaggaggagcagaagctggaagcacacagtgactgggttcgagacgtggcctgg
gccccctccattggcctgcccaccagcaccatcgccagctgctcccaggatggtcgtgtg
ttcatttggacctgtgacgatgcctcgggcaatacatggtcccccaaactgctacacaag
ttcaatgatgttgtgtggcacgtgagctggtccatcacagccaacatcctggccgtctca
ggcggagacaataaggtgaccctgtggaaagagtctgtcgacgggcagtgggtatgcatc
agtgatgtcaacaagggccagggttccgtgtccacttcagtcacagagggccagcagaat
gagcagtga
DBGET
integrated database retrieval system