Equus caballus (horse): 100058279
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Entry
100058279 CDS
T01058
Symbol
SMARCA2
Name
(RefSeq) LOW QUALITY PROTEIN: probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03082
ATP-dependent chromatin remodeling
ecb04714
Thermogenesis
ecb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100058279 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100058279 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100058279 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100058279 (SMARCA2)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100058279 (SMARCA2)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100058279 (SMARCA2)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100058279 (SMARCA2)
Chromatin remodeling factors
BAF complex
100058279 (SMARCA2)
PBAF complex
100058279 (SMARCA2)
GBAF(ncBAF) complex
100058279 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
100058279
NCBI-ProteinID:
XP_014590918
Ensembl:
ENSECAG00000024187
VGNC:
23318
LinkDB
All DBs
Position
23:23259181..23426095
Genome browser
AA seq
1564 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSADFPQEGLHQMHKPIDALHDKGIVEDLHCGSMKGTGMRPPHPGMGPPQSPMDPHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLIPGDPQSMNQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQPQQQPPQPQPQPQQPPQQQAL
INYNRPSGPGLELSGPSTPQKLPVPAPSGXXXXXXXXGPSVPQPAPGQPSPILQLQQKQS
RISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATVELKALRLL
NFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQ
KHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRL
MAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKA
EENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPG
YEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVD
DEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGI
LADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG
TPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQV
LNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDL
NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGI
LLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELY
RASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRA
ALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQ
NEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEE
NEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIK
DDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKR
KRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKV
PSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGD
LEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDEE
ESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDENEQSEASG
TDDE
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggcgcgatgccccacccagggccttcgccggggcccgga
ccctctcctggacccatccttggacctagtccaggacctggcccctccccaggttccgtc
cacagcatgatggggccaagtcctggacctccgagtgtctcgcaccctatgcctaccatg
gggtctgccgacttcccacaggaaggcttgcatcaaatgcataagcccattgatgctttg
cacgacaaggggattgtagaagatctccattgtggatccatgaagggcaccggcatgcga
ccacctcacccgggaatgggccctccccagagtccgatggatccacacagccaaggttac
atgtcgccacacccatctccgttaggagccccagagcacgtctccagccctatgtcggga
ggaggcccgaccccaccgcagatgccgccaagccagccagggcccctcatcccgggtgat
ccacagtccatgaaccagcccaacagagggccgtcgcctttcagtcctgtccagctgcat
cagctgcgagctcagattttagcttacaaaatgctggcgcggggccagcccctccccgaa
acactgcagcttgccgtccaggggaaaaggacgttgcctggcatgcagcagcagcagccc
cagcagcagccgccgcagccacaaccgcaaccacagcagccgccgcagcagcaggccctt
attaactacaacagaccatctggcccggggctggagctgagcggcccgagcaccccgcag
aagctgccggtgcccgcgcccagcggcnncnnnnnnnnnnnnnnnnnnnncgggccctcc
gtgccgcagccggccccggggcagccctcgcccatcctgcagctgcagcagaagcagagc
cggatcagccccattcagaagccgcaaggcctggaccccgtggagattctgcaggagcgg
gaatatagacttcaggctcgcatagctcataggatacaagaactggaaaatctgcctggc
tctttgccaccagatttacgaaccaaagcaaccgtggaactgaaagcgcttcggttactc
aatttccaacgtcagctgagacaggaggtggtggcctgcatgcgccgggacacaaccctg
gagacagctctcaactccaaagcttacaaacggagcaagcggcagaccctgcgggaagcc
cgcatgaccgagaagctggagaagcagcagaagatcgagcaggagaggaagcgccggcag
aagcaccaggaatacctgaatagtattttgcaacatgcaaaagattttaaggagtaccat
cggtctgtggctgggaagatccagaagctttccaaagcagtggcaacttggcacgccaac
actgaaagggagcagaagaaagagacggagcggattgaaaaggagagaatgcggaggttg
atggctgaagatgaagagggctatagaaaactgatcgatcaaaagaaagacaggcgttta
gcttaccttttacagcagacagatgagtatgtggccaacctgaccaacctggtttgggag
cacaagcaagcccaagcagccaaagagaagaaaaagaggaggaggcggaagaagaaggct
gaagagaacgcagagggaggagagtctgccctgggaccagatggagagccaatagatgag
agcagtcagatgagtgaccttcctgtcaaggtgactcacacagaaactggcaaggtcctg
ttcggaccagaagcacccaaagcaagtcagctggacgcctggttggaaatgaatcctggt
tatgaagtggcccctagatccgacagcgaagagagtgattctgattatgaggaagaggat
gaggaagaagagtccagtcgccaagaaaccgaagagaaaatacttctggatccaaacagt
gaagaagtttctgagaaggatgctaagcagatcattgagacagccaagcaagacgtggat
gatgaatacagcatgcagtacagtgccaggggctcccagtcctactacaccgtggctcac
gccatctctgagagggtggagaagcagtctgccctgctcatcaatggcaccctgaagcat
tatcagctccagggcctggaatggatggtttccctgtataataacaatttgaacggaatc
ttagctgatgaaatggggctaggaaagaccatacagaccattgcactcatcacttatctg
atggagcacaaaagactcaatggcccctatctcatcattgttcccctttcgacgctatca
aactggacatatgaatttgacaaatgggctccttctgtggtgaaaatttcttacaagggc
acccctgccatgcgtcgctcccttgtcccccagctccggagtggcaaattcaacgtcctc
ctgactacttacgagtacattataaaagacaagcacattcttgcaaagatccggtggaaa
tacatgatagtggacgaaggccaccggatgaagaatcaccactgcaagctgactcaggtc
ctcaacactcactacgtggcccccaggaggatcctcttgactgggaccccactgcagaat
aagctcccggagctctgggccctcctcaacttcctcctccccacaatttttaagagctgc
agcacgttcgagcagtggtttaatgctccgtttgccatgactggagaaagggtggactta
aatgaagaagaaaccatattgatcatcaggcgtctgcataaggtgttgaggccattttta
ctgaggagactgaagaaagaagttgaatcccagcttccagaaaaagtcgaatatgtgatc
aagtgcgacatgtcagctctgcagaagattctgtatcgccatatgcaagccaaagggatt
ctcctcacagatggttctgagaaagataagaagggcaaagggggtgctaagacacttatg
aacactatcatgcagctgagaaaaatctgcaatcacccatacatgtttcagcacattgag
gaatccttcgctgaacacctgggctattcaaatggggtcatcaatggggctgagctgtat
cgggcctcaggaaagtttgagctacttgatcgtattctgcccaaattgagagcgactaat
caccgcgtgctgcttttctgccagatgacgtctctcatgaccatcatggaggactatttt
gccttccggaacttcctctacctgcgccttgatggcaccaccaagtctgaagatcgtgct
gctttgctgaagaaattcaacgaacccgggtcccagtatttcattttcttgctgagcaca
agagctggaggcctgggcttaaaccttcaggcggccgataccgtggtcatctttgacagc
gactggaaccctcatcaggatctgcaagcacaagaccgagctcaccgcatcggccagcag
aacgaggtccgggtgctgagactctgcaccgtgaacagcgtggaggaaaagatcctcgca
gccgcaaagtacaagctgaatgtggatcagaaagtgatccaggcaggcatgtttgatcaa
aagtcttcaagccacgagcggagggcattcctgcaggccatcttggagcatgaggaggaa
aatgaggaggaagacgaagtaccggatgacgagactctgaaccaaatgattgctcgacga
gaagaagaatttgatctttttatgcgtatggacatggaccggcggagggaggatgcgcgc
aacccgaagcggaagcctcgtttaatggaggaagatgagctgccctcctggattattaaa
gatgacgccgaagtagaacggctgacgtgtgaagaggaagaggagaaaatatttggtagg
gggtctcgccagcgccgggatgtggactacagcgatgccctcacagagaagcagtggctg
agggccattgaagacggcaatttggaagaaatggaagaggaggtacggctaaagaagcga
aaaagacgaagaaatgtggataaagatcctgcgaaagaggatgtggaaaaggctaagaag
agaagaggccgtcctccagctgagaaactatcaccaaatccccccaaactgacaaagcag
atgaatgctatcatcgatactgtgataaactacaaagacaggtgtaacgtggagaaggtg
cccagtaattctcagttggaaatagaaggaaacagttcagggcgacagctcagtgaagtc
ttcattcagttaccttcaaggaaagaattaccagaatactatgaattaattaggaagccg
gtggatttcaaaaaaataaaggaaagaattcgtaatcataaataccggagcctgggcgac
ctggagaaagatgtcatgcttctctgtcacaatgctcagacattcaacttggagggatcc
cagatctatgaagactccatcgtcttacagtcagtgtttaagagtgctcggcagaaaatt
gccaaagaggaagagagtgaggacgaaagcaatgaagaggaggaagaggaagatgaagag
gagtcagagtcggaggcaaaatccgttaaggtgaaaattaagctcaataaaaaagatgag
aaaggccgggacaaaggaaaaggcaagaaaaggccaaatcgaggaaaagccaaacccgtc
gtgagcgactttgacagtgatgaagagcaagatgaaaatgaacagtcagaagcaagtgga
actgatgatgagtga
DBGET
integrated database retrieval system
