Equus caballus (horse): 100058321
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Entry
100058321 CDS
T01058
Symbol
LTA
Name
(RefSeq) lymphotoxin-alpha
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
ecb
Equus caballus (horse)
Pathway
ecb04060
Cytokine-cytokine receptor interaction
ecb04061
Viral protein interaction with cytokine and cytokine receptor
ecb04064
NF-kappa B signaling pathway
ecb04668
TNF signaling pathway
ecb04940
Type I diabetes mellitus
ecb05166
Human T-cell leukemia virus 1 infection
ecb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100058321 (LTA)
04668 TNF signaling pathway
100058321 (LTA)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100058321 (LTA)
04061 Viral protein interaction with cytokine and cytokine receptor
100058321 (LTA)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100058321 (LTA)
05168 Herpes simplex virus 1 infection
100058321 (LTA)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
100058321 (LTA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ecb04052
]
100058321 (LTA)
Cytokines and neuropeptides [BR:
ecb04052
]
Cytokines
Tumor necrosis fators
100058321 (LTA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
100058321
NCBI-ProteinID:
XP_001491383
Ensembl:
ENSECAG00000000967
VGNC:
19829
UniProt:
A0A0U5J6U8
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Position
20:32217362..32222063
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AA seq
204 aa
AA seq
DB search
MTPSGRLYLLRVCGAPLLLLLGLLLALPPEAQGLPGVGLSPSAARTAHQHPQKHFTQDTL
KPAAHLVGDPSTQNSLRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGEGCF
PKATPTPLYLAHEVQLFSSQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTQGDQL
STHTDGIPHLLLSPSSVFFGAFAL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacaccatctggacgtctctacctcctgagggtgtgcggcgcccccctcctcctcctt
ctggggttgctgctggccctgccgcctgaggcccaggggctccctggtgttggcctgtca
ccctcagctgcccggactgcccatcagcacccccagaagcacttcacccaagacactctc
aaacctgctgctcaccttgttggagaccccagcacccagaactccttgcgctggagagca
aacacagatcgtgccttcctccgccatggcttctctttgagcaacaattccctcctggtc
cccaccagtggcctctacttcgtctactcccaggtggtcttctctggggaaggctgcttc
cctaaggccaccccaacccctctctacctggctcacgaggtccagctcttctcttcccag
taccccttccacgtgcctctcctcagcgctcagaagtccgtgtgcccagggccacaggga
ccttgggtgcgctcagtgtaccagggggctgtgttcctgctcacccagggagaccagcta
tccactcacacagatggcatccctcacctactccttagtcccagtagtgtcttctttggg
gcctttgctctgtag
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integrated database retrieval system