Equus caballus (horse): 100058515
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Entry
100058515 CDS
T01058
Symbol
NCSTN
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
ecb
Equus caballus (horse)
Pathway
ecb04330
Notch signaling pathway
ecb05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100058515 (NCSTN)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100058515 (NCSTN)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
100058515
NCBI-ProteinID:
XP_001504481
Ensembl:
ENSECAG00000009183
VGNC:
20606
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Position
5:complement(33614284..33628848)
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AA seq
709 aa
AA seq
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MATAGGGSVADPGSQGFLRLLSFCVLLAGSCWGNSVERKIYIPLNKTAPCVRLLNATHQI
GCQSSVSGDTGVIHVVEKEEDLQWVLTDGPNPPYVVLLEGTLFTRSVMEKLKGRAHRIAG
LAVSLAKPRPASGFSPSVQCPNDGFGVYSNSYGPEFAHCNAIKWNSLGNGLAYEDFSFPI
FLLEDENETNVIKQCYRDHNLSQNGSAPAFPLCAMQLVSHMHAVISTVTCMRRSSIQSTF
SINPEIVCDPLSDYNVWSMLKPINTSGMLEPDARVVVAATRLDSRSFFWNVAPGAESAVA
SFVTQLAAAEALQKAPDVTTLPRNVMFVFFQGETFDYIGSSRMVYDMEKGKFPVQLENID
SFVELGQVALRKSLELWMHTDPVSRKNEAVEKQVKDLLATLEKIGAGISTVVLRRPDYSK
PLPPSSLQRFLRARNISGVVLADHLNVFHNHYYQSIYDTAENINVNYPESQSPEEDLNFV
TDTAKALADVATVLGRALYQLAGGTNFSNTIQADPQTVTRLLYGFLIRANNSWFQSILRQ
DLRSYLGDGPLQHYIAVSSPTNTTYVVQYALANLTGQVVNLTREQCQDPSKVPSENKDLY
EYAWVQGPLNSNETDWLPRCVRSTARLARALSPAFELRQWGSTEYSTWTESRWKEIRARI
FLIASKELEFITLIVGFSILVFSLIVTYCINAKADVLFITPREPGSVSY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcggggggcggctctgtggctgacccgggaagtcagggttttcttcgcctt
ctgtctttctgcgtcctactggcaggttcatgctggggaaactcagtggagaggaagatc
tacatccccttaaataagacagctccctgtgttcgtctgctcaatgccactcatcagatt
ggctgccaatcttccgttagtggggacacaggagttatccacgtagtagagaaggaagag
gacctgcagtgggtgctgactgatggccccaaccccccttacgtggttctgctggaggga
acgctttttaccaggagtgtgatggagaaactgaaggggagagcccaccgaattgctggt
cttgcagtgtccttggccaagcccagacctgcctcaggcttctctcctagtgtgcagtgt
cccaatgatgggtttggtgtttactccaactcctatgggccggagtttgctcactgcaat
gcaataaagtggaactccctgggcaatggcttggcttatgaagactttagtttccccatc
tttcttcttgaggatgaaaatgaaaccaatgtcatcaagcagtgctatcgtgatcacaac
ctgagtcagaatggctcagcaccagccttcccgctgtgtgccatgcagctcgtctctcac
atgcacgctgtcatcagcactgtcacctgcatgcggcgcagctccatccagagcaccttc
agcatcaacccggaaatcgtctgtgaccccctgtccgactacaacgtatggagcatgctt
aagcctataaatacatctgggatgttagagcctgacgccagggttgtggttgctgccacc
cggttggacagtcgttcctttttctggaatgtggccccaggggctgaaagtgccgttgcc
tccttcgtcactcagctggctgcagctgaagctttgcagaaggcacccgatgtgaccact
ctgccccgcaatgtcatgtttgtcttcttccaaggggaaacttttgactacattggcagc
tccagaatggtctacgatatggagaagggcaagtttcctgtgcagttggagaacattgac
tcattcgtggagctgggacaggtggccttaagaaaatcactagagctttggatgcacaca
gaccccgtgtctcggaaaaatgaagctgtagagaagcaggtgaaggacctcctggccaca
ctggagaagattggtgctggcatttctaccgtagtcctcaggaggccggattattccaag
cctctcccaccatcttctctgcagcgatttcttcgagctcgaaacatctctggcgttgtt
cttgctgaccacttaaatgtcttccataaccactattaccagagcatttacgacactgct
gagaacattaacgtgaactaccctgaatcgcagagccctgaagaggacctgaactttgtg
acagacactgccaaggccctggcagatgtggccacagtgctgggacgtgccctgtaccag
cttgcaggaggaaccaacttcagcaacaccattcaggctgatcctcaaacagttacccgc
ctgctctatgggttcctgattagagccaacaactcatggttccagtctatcctcaggcag
gacctaaggtcctacttgggtgatgggcctcttcagcattacattgctgtctccagcccc
accaacaccacttatgttgtacagtatgccttggcaaatttgactggccaggtggtcaac
cttacccgcgagcagtgccaggatccaagtaaagtccccagcgaaaacaaggatctgtat
gaatacgcatgggttcagggccctttgaattccaacgagacagactggctcccccgatgt
gtgcgttccacggcacgactggccagggccttgtcccctgcctttgaactgaggcagtgg
ggctctactgagtactcgacgtggactgagagccgctggaaagagatccgcgcccggata
ttcctgatagccagcaaagagcttgagtttatcaccctgatagtgggcttcagcatcctt
gtcttctctctcatcgtcacctactgcatcaatgccaaagccgatgtccttttcattact
ccccgggagccaggatctgtttcttactga
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