Equus caballus (horse): 100058746
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Entry
100058746 CDS
T01058
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
ecb
Equus caballus (horse)
Pathway
ecb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100058746 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecb02000
]
100058746 (ABCA4)
Transporters [BR:
ecb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100058746 (ABCA4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
ACT_13
AAA_15
AAA_23
AAA_22
SRP54
Motif
Other DBs
NCBI-GeneID:
100058746
NCBI-ProteinID:
XP_005610465
Ensembl:
ENSECAG00000013379
VGNC:
14903
LinkDB
All DBs
Position
5:67809739..67941330
Genome browser
AA seq
2268 aa
AA seq
DB search
MGFARQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNVNPLYSQHECHFPNKA
MPSAGMLPWLQGIFCNVNNPCFQSPTPGESPGIVSNYNNSILARVYRDFQELLVDAPESQ
HLGHIWTELRTLSHLMDTLRTHPERVAGRGIRIRDVLKDEETLTLFLIKNIGLSDSVVHL
LVNSQVRPEQFAHGVPDLVLKDIACSEVLLERFLIFSQRRGAQTVRDAICSLSQGTLQWM
EDSLYANVDFFKLFRVLPTLLESSSQGINLRSWGKILSDVSPRIQEFIHRPSVQDLLWVT
RPLLQTDGPETFTQLTGILSDLFCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRKDPIY
SYDKRTTTFCNALIQSLESNPLTKIVWRAAKPLLMGKILFTPDSPAARRVLKNANSTFEE
LERLRKLVKAWEEVGPQIWYFFDKSTQMTMIRDTLGNPTVRDFLNKQLAEEGIAAEAVLH
FLYNGPRESRADNMADIDWRDVFDIADRTLRLANQYLECLILDKFESYDDEIQLTQRALS
LLEENRFWAGVVFPDMYPWTSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVED
FRYIWGGFAYLQDMVEQGITRSQAQAQVPVGIYLQQMPYPCFVDDSFMIILNRCFPIFMV
LAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNAVIWCTWFLDSFSIMSMSIFLLTIFIM
HGRILHYSNPFILFLFLLAFSTATIMQCFLLSTFFSRASLAAACSGVIYFTLYLPHILCF
AWQDRMTADLKMAVSLLSPVAFGFGTEYLARFEEQGLGLQWNNIGNSPMEGDEFSFLMSM
KMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPI
TEEMEDPEHPEGINDSFFERELPGLVPGACVKNLVKIFEPHGRPAVDRLNITFYENQITA
FLGHNGAGKTTTLSILTGLLPPTSGTVLIGGKDIETSLDAVRQSLGMCPQHNILFHHLTV
AEHVLFYAQLKGRSWAEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDA
KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGKLYC
SGTPLFLKKCFGTGFYLTLVRRMKHIQSQGRVCEGTCSCESKGFSIRCPAHEDEITPEQV
LDGDVNELMDMVRHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLS
SFGISDTPLEEIFLKVTEDSDSGHLFAGGAQQRENVSLRHPCLGPSEKVRQTPQGSNGCS
AEPAPGAAGWPSPQPGGRLNSGARLRLQHVQALLVKRFHHAVRSHKDFLAQIVLPATFVF
LALMLSIIIPPFGEYPTLTLHPWMYGQQYTFFSMDQPGSEQLAALADVLLNKPGFGNRCL
KEEWLPEYPCGNSTPWKTPSVSLNVTHLLQEQKWTADNPSPSCRCSTREKLTMLPECPEG
AGGLPPPQRIQRSTEILQDLTNRNISDFLVKTYPALIQSGLKSKFWVNEQRYGGISIGGK
LPVLPITGEALVGFLSDLGQMMNVSGGPVTREASKEMSAFLKHLETEDNIKVWFNNKGWH
ALVSFLNVGHNAILRASLHKDRNPEEYGITVMSQPLNLTKEQLSEITVLTTSVDAMVAIC
VIFAMSFVPASFVLYLIQERVSKAKHLQFISGVSPITYWLTNFLWDIMNYTVSAALVVGI
FIGFQKKAYTSPNNLPALVALLMLYGWAVTPMMYPASFLFDVPSTAYVALSCANLFIGIN
SSAITFILELFENNRTLLSFNAVLRKLLIIFPHFCLGRGLIDLALSQAVTDVYARFGEQH
SSNPFQWDLIGKNLVAMAAEGVVYFLLTLLIQYHFFLTQWIGEPSKEPIVDEDDDVAEER
QRIISGGNKTDILRLNELTKIYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKML
TGDTTVTSGDATVAGKSILTNISDVHQSMGYCPQFDAIDDLLTGREHLYLYARLRGVPAE
KIEKVAKWCIQSLGLSLYADRLVGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQA
RRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGSFQCLGTIQHLKYKFGDGY
IVTMKIKSPKDDLLPDLNPVEQFFQGNFPGSVQRERHYNMLQFQVSSSSLARIFRLLLSH
KESLLIEEYSVTQTTLDQVFVNFAKQQTETHDVPLHPRAAGASQQAKI
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgcaagacaaattcagcttttgctctggaagaactggaccctgcggaaaagg
caaaagattcgctttgtggtggaactcgtatggcctttatctttatttctggtcttgatc
tggttaaggaatgtcaacccgctctacagccaacacgagtgccattttcccaacaaggcg
atgccctcagcaggaatgttgccatggctccaaggaattttctgcaacgtgaacaatcct
tgttttcaaagtcccaccccaggagaatctcctggaattgtgtcaaactacaacaactcc
atcttggcaagggtgtatcgagattttcaggaactccttgtggatgcaccagagagccaa
caccttggccatatttggacagaactccgcactttgtcccatctcatggacaccctccgg
actcaccccgagagagttgcaggaagaggaatacgaattcgggatgtcctaaaagatgaa
gaaacactgacactatttctcataaaaaatattggcctgtctgactcggttgtccacctt
ctggtcaactcccaagtccgtcccgagcagtttgctcacggagtcccagacctggtgctg
aaggacattgcctgcagcgaggtcctcctggagcgcttcctaatcttcagccagcgccgt
ggggcgcagacagtgcgtgacgccatatgctccctctcccaaggcaccctacagtggatg
gaagacagtctgtatgccaacgtggacttcttcaagctctttcgtgtgcttcccacactc
ctagagagcagttctcaaggtatcaatctgagatcctggggaaaaatattatctgatgtg
tcaccaagaattcaagaattcatccatcggccaagtgttcaagacctgctgtgggtgacc
aggccccttctgcagacagacggcccagagactttcacacagctgacgggcatcctgtct
gacctcttttgtggctacccggagggaggaggctctcgggtgttctccttcaactggtat
gaagacaataactataaggccttcctggggattgactctacaaggaaagatcctatctat
tcttatgacaaaagaacaacgaccttttgtaacgcattgatccagagcctggagtcaaac
cctctaaccaaaatagtgtggagggcggcaaagcctttgctgatgggaaaaatcctcttt
accccggattcccctgcagcacgcagggtactgaagaatgccaactcgacttttgaagag
ctggagcgccttaggaagttggtcaaagcctgggaagaagtcgggccccagatctggtac
ttctttgacaagagcacacagatgaccatgatcagagacaccctggggaacccgacagta
agagactttttgaataagcagcttgcagaggaaggtattgctgctgaagctgtgctccac
ttcctctacaacggtcctcgagagagccgggctgacaacatggccgacatcgactggagg
gatgtatttgacatcgctgatcgcaccctacgcctggctaatcaatacctggagtgcttg
atcctggataagtttgaaagctacgatgatgaaattcagctcacccaacgagccctctcc
ttgctggaggaaaacaggttctgggctggcgtggtattccctgacatgtatccctggacc
agctccctaccaccccacgtgaaatacaagatccggatggacatagacgtggtggagaaa
accaataagatcaaagacaggtactgggattctggtccccgagctgatcccgtggaagat
ttccgatacatctggggagggtttgcttatctacaggatatggtggaacagggcatcacg
aggagccaggcccaggcgcaggttccggtgggaatctacctccagcagatgccttacccc
tgcttcgtggatgactcttttatgatcatcctgaaccgctgtttccctatcttcatggtg
ctggcctggatctactctgtctccatgactgtaaagagcatcgtcttagagaaggagtta
agactgaaggagaccttgaaaaatcagggtgtctccaatgcagtgatctggtgtacctgg
ttcctggacagcttctctatcatgtcaatgagcatcttcctcctgaccatattcatcatg
catggaagaatcctacattacagcaatccattcatcctcttcctgttcctgttggctttc
tccacggcaaccatcatgcagtgcttcctgctcagcaccttcttctccagggccagcctg
gcggcagcctgtagtggcgtcatctacttcactctctacctgccgcacattctctgcttc
gcctggcaggaccgcatgacggccgacctgaagatggctgtgagtctgctgtctcctgtg
gcatttgggtttggcactgagtacctggctcgctttgaggagcagggcctggggctgcag
tggaacaatatcgggaacagtcccatggaaggggatgaattcagtttcctgatgtccatg
aagatgatgctcctcgatgccgctctgtatggcttgcttgcctggtaccttgaccaggtg
tttccaggggactatggaaccccacttccttggtacttccttctgcaagagtcctattgg
cttgggggtgaagggtgttcaaccagagaagaaagggccctggaaaagaccgaacccata
acagaggaaatggaggacccggaacacccagaaggaataaatgactctttctttgaacgt
gagcttccaggcttggttccaggggcgtgtgtgaagaatctggtaaagatttttgagccc
cacggcaggccagccgtggaccgtcttaatatcaccttctacgagaaccagatcaccgcc
ttcctcggtcacaatggagcagggaaaaccaccaccttgtccatcctgacgggtctgttg
ccaccgacatcaggcaccgtgctcattgggggaaaggacattgaaaccagcctggatgca
gtccggcagagccttggcatgtgtccacagcacaacatcctgttccaccacctcacagtg
gctgaacacgtcctgttctacgcccagctgaaagggaggtcctgggcggaggcccagctg
gagatggaagccatgttggaagacacaggcctccaccacaagaggaacgaagaagctcag
gacctgtcaggtggcatgcagaggaagctctccgttgccattgcctttgtgggagatgcc
aaggtggttgttctggatgagcccacctctggggtggacccctactcaaggcgctcaatc
tgggacctgctcctgaagtatcgctcaggcagaacgatcatcatgtccactcaccacatg
gacgaggccgacctcctcggcgaccgcatcgccatcatttcccagggaaagctgtactgc
tccggcaccccgctcttcctgaagaagtgctttggcaccggcttctacttaaccttggtg
cgcaggatgaaacacatccagagccaaggaagggtctgtgagggtacctgcagctgtgag
tctaaaggtttctccatcaggtgtccagcccacgaagatgagataactccagaacaagtc
ttggatggggacgtgaatgagctgatggatatggttcgccaccatgttccagaggcaaag
ctggtagaatgcattggtcaagaacttatcttcctccttccaaataagaatttcaagcag
agagcatatgccagccttttcagagaactggaggagacgctggctgacctggggctcagc
agttttggaatttctgacactcccctggaagagatttttctgaaggtgacggaggattct
gactcaggacacctatttgctggcggcgctcagcaaagagaaaatgtcagcctccgacac
ccctgtttgggtcccagcgagaaggtcagacagactccccagggctccaatggctgctct
gcagagccagctcctggcgctgcgggctggccttccccacagcctggcggccggctcaac
tcaggcgcgcggctccggctccagcacgtgcaggcactgctggtcaagcgattccaccac
gccgtccgcagccacaaagacttcctggcccagattgtgctcccggccacttttgtgttt
ttggcactgatgctttccatcatcatccctccctttggtgaatatcccactttgaccctt
cacccctggatgtatgggcagcagtatactttcttcagcatggaccagccgggcagtgag
cagctagctgcgcttgcagacgtcctcctgaacaagccaggctttggcaaccgctgcctg
aaggaagagtggcttccggagtacccctgtggcaattcaacaccctggaagacaccctct
gtgtctctgaacgtcacccacctgctccaggagcagaaatggacagcagacaacccctcg
ccgtcctgcaggtgcagcaccagagagaagctcaccatgctccccgagtgccctgagggt
gcaggggggctcccaccccctcagagaatccagcgcagcacggaaattctacaagacctt
actaacaggaacatctctgacttcctggtgaaaacgtatcctgctcttatacaaagcggc
ttaaagagcaaattctgggtcaatgaacagaggtacggaggaatctccatcggaggaaag
ctgccggtcctccccatcactggggaagcgcttgttggattcttaagcgacctcggccag
atgatgaacgtgagcgggggccctgtcaccagagaggcctctaaagaaatgtctgctttc
cttaaacacctagaaactgaagacaacattaaggtgtggtttaacaacaaagggtggcat
gccctggtcagctttctcaacgtggggcacaacgccatcttacgggccagcctgcacaaa
gacaggaaccccgaagagtacggcatcaccgtcatgagccagcccctgaacctgaccaag
gagcagctctcggagatcacagtactgaccacatcggtggatgctatggttgccatctgc
gtgatttttgccatgtcctttgtcccagccagctttgtcctttatttgatccaggagaga
gtgagcaaagccaagcacctccagtttatcagtggagtgagccccatcacctactggctg
accaacttcctctgggacattatgaattacaccgtgagtgctgcactggtggtgggtatc
ttcatcgggtttcagaagaaagcctacacatctccaaacaatcttcctgcccttgttgca
ctgctcatgctgtacggatgggcggtcactcccatgatgtatccagcatccttcctgttt
gatgtccccagcacagcctacgtggccttgtcttgtgctaatctgttcatcggcatcaac
agcagtgccatcaccttcatcctggaattatttgagaataaccggacgctgctcagtttc
aatgctgtgctgaggaagctgctcattatcttcccccacttctgcctgggtcggggcctc
attgacctggcactgagccaggccgtgacggacgtctatgcccgatttggtgagcagcac
tcttcaaatccattccagtgggacctgattgggaagaacctggttgccatggcagcagaa
ggggtggtgtacttcctcctgaccctcctcatccagtaccatttcttcctcacacaatgg
attggcgaaccctctaaggagcccattgtagatgaagatgatgatgtagctgaagagaga
caaagaattattagtggaggaaataaaactgatatcttacggctaaatgaactaaccaag
atttactcaggcacctccagcccagcagtggacagactgtgtgtgggagtccgccctgga
gagtgctttggcctcctgggagtgaatggagctgggaaaacaaccacattcaagatgctc
actggggacactacagtgacctcaggcgatgccactgtagcaggcaagagtattttgacc
aatatttctgacgtgcatcaaagtatgggctactgtcctcagtttgatgcaattgatgac
ctgctcacagggcgagaacatctgtatctttatgcccggcttcgaggtgtaccagcagag
aaaatcgagaaggttgcaaagtggtgtattcagagcctgggcctgtctctctacgcagac
cgcctggtcggcacctacagtgggggcaataagcgcaaactctccacagccattgccctg
ataggctgcccaccgctggtgctgctggatgagcccaccacaggcatggacccccaggca
cgccgcatgctgtggaacaccatcgtgagcatcatccgagaagggagggctgtggtcctc
acatcccacagcatggaagaatgtgaggccctgtgtacccggctggccatcatggtgaag
ggctcctttcagtgtctgggcactattcagcacctcaagtacaagtttggagatggctac
attgtcaccatgaaaatcaaatcccctaaggacgacttgcttcccgacctgaatcccgtc
gaacagttcttccaggggaacttcccgggcagcgtgcagagggagaggcactacaacatg
ctccagttccaggtctcctcctcctccctggccaggatcttccggctgctcctctcccac
aaggagagcctgctcatcgaggagtactcggtcacgcagaccacgctggaccaggtattt
gtgaactttgctaaacagcagactgaaactcacgatgtccctttgcaccctcgagctgct
ggagccagccaacaagccaagatctga
DBGET
integrated database retrieval system
