Equus caballus (horse): 100059049
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Entry
100059049 CDS
T01058
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100059049 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100059049 (CNOT6L)
Enzymes [BR:
ecb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100059049 (CNOT6L)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100059049 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100059049 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
100059049
NCBI-ProteinID:
XP_003364735
Ensembl:
ENSECAG00000001582
VGNC:
16679
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All DBs
Position
3:60271979..60374683
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AA seq
555 aa
AA seq
DB search
MRLIGMPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTA
LHLNDNYLSRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYE
LGRLFQLQTLGLKGNPLSQDILNLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITLKER
DQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQE
VETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAH
MHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVV
EYLSNGGVADNHKDFKELRYNECLMNFSCNGKNGSSEGRITHGFQLKSAYENNLMPYTNY
TFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP
PLLPLVNGVHLPNRR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagactaatagggatgccaaaggaaaaatatgatcctccagatcctcgcagaatttat
accatcatgtcagcagaggaggtagccaatgggaaaaaatctcactgggcagaattagaa
atctcgggtagagtgcggagcttaagtacgtcactttggtcattgacacacttgacagca
ctgcacctaaatgacaattaccttagtcgcattccacctgatattgccaagcttcataat
ctggtttacctggatctgtcatccaataaactcagaagtttaccagcagaactaggaaac
atggtgtctctcagggaattgcttttaaataacaatctgttacgggttttgccttatgaa
cttggtcggctcttccagctacaaactctaggtttgaaaggcaatcctttatcacaggat
attctcaatttataccaggacccagatggaacccgaaagctactgaacttcatgcttgac
aatcttgcagttcatccagagcagcttcctccgaggccatggattacattaaaagaacga
gaccaaattctgccatcagcatcattcacagttatgtgttacaatgtgttatgtgataaa
tacgccacccggcagctatatggctattgcccatcctgggcattaaactgggaatacagg
aaaaagggaattatggaagaaattgttaactgtgatgcagatatcattagtcttcaggaa
gtggaaacagagcaatacttcactctctttctgccagcattgaaggagcgtggatatgat
ggatttttttctccaaagtcacgtgccaaaataatgtctgagcaggagagaaagcatgtg
gatggttgtgcaatattcttcaaaacagaaaaatttacattggtgcagaagcatacagtg
gaatttaaccaagtggcaatggctaattcagatggatccgaagctatgttgaacagagtg
atgacaaaagataatattggtgtcgctgtggtattagaggtccacaaagaactatttgga
gcaggtatgaagcctattcatgctgcagacaaacagctgcttatagtggcaaatgcccac
atgcattgggacccagagtattctgatgtgaaactcatccagaccatgatgtttgtctca
gaggttaaaaacattctggagaaggcctctagtaggcctggcagcccaaccgcagatcct
aattccatcccgctggtgctatgtgcagatcttaactcattgccagattcaggtgttgtg
gaatatttaagcaatggaggagtagctgacaaccataaagacttcaaggaactaaggtac
aatgagtgtcttatgaacttcagctgcaatggaaagaatggaagctcagaagggagaatc
acacatggcttccaactgaagagcgcctatgaaaataacttgatgccttacaccaattac
acctttgatttcaaaggcgtgattgactacattttctattccaagactcatatgaacgtg
cttggtgtcctggggcctttagatcctcaatggctggttgagaacaacatcactgggtgt
ccacaccctcacatcccttcagaccacttctcactgttaacacaacttgaactccaccct
ccactcctgcctcttgtcaatggtgttcacttgcctaatcggaggtag
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