Equus caballus (horse): 100059175
Help
Entry
100059175 CDS
T01058
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
ecb
Equus caballus (horse)
Pathway
ecb03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ecb04142
Lysosome
ecb04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
100059175 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100059175 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
100059175 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecb02000
]
100059175 (NPC1)
Transporters [BR:
ecb02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
100059175 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
100059175
NCBI-ProteinID:
XP_005612821
Ensembl:
ENSECAG00000021651
VGNC:
20831
UniProt:
A0A3Q2IC60
LinkDB
All DBs
Position
8:41467510..41515891
Genome browser
AA seq
1277 aa
AA seq
DB search
MSAPGPALGLLLLLLCAAQVFSQSCVWYGECGIAFGDKRYNCEYSGPPKPLPKDGYDLLQ
ELCPGLFFGNVSLCCDVQQLQTLKDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPQQSQF
LNVTATEDYVDPVTNQTKTNVIELQYYVGESFANAMYNACRDVEAPSSNDKALGILCGKE
AEACNATNWIEYMFNKNNGQAPFTITPIFSDFPAHGMEPMNNATKGCNESVDEVTGPCSC
QDCSVVCGPKPQPPPAPAPWRILGLDAMYVIMWTTYMAFLLMFFGAFFAVWCYRKRYFVS
EYTPIDSNIAFSVNASDKGEAACCDPLGAAFEGCLRRLFARWGSFCVRNPGCVVVFSLAF
IAACSSGLVFVRVTTNPVDLWSAPSSQARLEKEYFDAHFGPFFRTEQLIIRAPHGHVHTY
EPYPSGADVPFGPPLALEVLHQVLDLQTAIENITASYNNETVTLQDICLAPLSPYNKNCT
IMSVLNYFQNSHSMLDHKVEDDFFVEADYHTHFLYCVRAPASLNDTTLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRALAWEREFINFVKNYKNPNLT
ISFSAERSIEDELNRESNSDVFTVVISYAVMFLYISIALGHIKSCSRLLVDSKISLGVAG
ILIVLSSVACSLGIFSYIGIPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQGETL
DQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSLFAGLAVLIDFLLQITCFV
SLLGLDIKRQEKNRLDVLCCLRGSEDGTSVQASESFLFRFFRNSYSPLLLKDWMRPIVIA
VFVGVLSFSIAVLNKVEIGLDQFLSMPDDSYVIDYFQSIRQYLHAGPPVYFVLEEGHDYT
SLKGQNMVCGGMGCDNDSLVQQIFTAAQLDSYTRIGFAPSSWIDDYFDWVKPQSSCCRVY
NSTDQFCNASVVDPACVRCRPLTPEGKQRPQGRDFMRFLPMFLSDNPNPRCGKGGHAAYS
SAVNILGNDTGVGATYFMTYHTVLQTSADFIDAMKKARLIAGNITKTMGLEGGNYRVFPY
SVFYVFYEQYLTIIDDTIFNLGVSLGAIFLVTMVLLGCELWSAVILCVTIAMILVNMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSAKGSRVERAEEALSHMGSSVFSG
ITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSINKAKTL
ATQERYKGTEREQLLNF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcccggcccggccctcggcctcctgctgctgctgctctgtgccgcgcaggtg
ttttcacagtcctgtgtttggtatggagagtgcggaattgcatttggagataagaggtac
aattgcgaatattctgggccaccaaaaccattgccaaaggatgggtatgatttactgcag
gagctctgtccaggactcttctttggcaatgtcagcctttgttgcgacgttcagcagctt
cagacgctgaaggacaacctgcagcttcctctacagtttctgtccagatgtccgtcctgt
ttttataacctaatgaacctgttttgcgagctgacatgtagccctcaacaaagtcagttt
ctgaacgttacagcaactgaagactatgttgatcctgttacgaaccagacgaaaacaaat
gtaatagaattgcagtactatgttggcgagagttttgctaatgccatgtacaacgcgtgc
agggatgtggaggccccctcaagtaacgacaaagccctgggaatcctgtgtgggaaggaa
gccgaagcctgcaatgccaccaactggatcgagtacatgttcaataagaacaacggccag
gcacccttcactatcacacccattttttcagactttccagcccatgggatggagcccatg
aacaatgccaccaagggctgtaacgagtctgtggacgaggtcacggggccgtgcagttgc
caggattgctcagtggtttgtggccccaagccccagcccccgcctgctcctgctccctgg
agaatcttgggcctggacgccatgtatgtcatcatgtggaccacctacatggcctttttg
ctcatgttctttggagcattttttgccgtgtggtgctacagaaaacgatatttcgtctcc
gagtacactcccattgatagcaatatcgctttctctgtgaatgccagtgacaaaggggag
gcggcctgctgcgacccgctcggggcggcgttcgagggctgcttgaggcggctcttcgcg
cgctggggctctttctgcgtccgaaaccccggctgcgtcgtcgtcttctccctggccttc
atcgccgcgtgttcctcaggcctggtgttcgtccgggtcaccaccaacccagtggacctc
tggtccgcccccagcagccaggcgcgcctggagaaagagtacttcgacgcgcacttcggg
cccttcttccgcacggagcagctcatcatccgggccccacacggccacgtgcacacgtac
gagccgtacccctcgggagccgacgtgcccttcggccctccgctcgccttggaggttctg
caccaggttcttgacttacaaacagccatcgaaaacattactgcatcttataacaacgag
actgtgacacttcaagacatctgcttggcccctctctcaccatataacaagaactgcacc
attatgagtgtgttaaattacttccagaacagccattccatgctggaccacaaagtggag
gacgacttctttgtggaagcggattaccacacgcactttctgtactgtgtccgggctcct
gcctccctcaatgatacgactttgctccacgatccttgtctgggcacgttcggtggaccc
gtgttcccgtggctcgtgttagggggctatgatgatcaaaactacaataacgccacagcc
cttgtgattacctttcctgtcaataattactataacgatacggagaagctccagagggct
ctggcctgggaaagagagtttattaattttgtgaagaactataagaatccaaatctgacc
atttctttctctgctgaacgaagtattgaggatgaactaaatcgtgaaagtaacagtgat
gtgttcactgttgtgatcagctatgctgtcatgtttctgtatatttccatagccttgggg
cacatcaaaagctgtagcaggcttctagtggattctaaaatctcccttggcgtcgcgggc
atcctcatcgtgttgagctccgtggcgtgctcgttgggcatcttcagctacattgggatc
cctctcaccctcattgtgattgaagtcatcccgttcctggtgctggctgttggcgtggac
aacatcttcatcctggtgcagacctaccagagagatgaacgtcttcagggtgaaaccctg
gatcagcagctgggcagggtcctaggagaagtggctcctagcatgttcctgtcatccttc
tcagagactgttgcatttttcttaggggcgttgtcggtgatgccagccgttcacactttc
tctctgtttgcgggactggcagtcctcattgacttccttcttcagattacctgttttgtg
agtctcttggggctagacattaagcgtcaagagaaaaaccggctggacgtcctttgctgt
ctgagaggctctgaagatggaacgagtgtccaagcctctgagagcttcttgtttcggttc
ttcagaaactcctattctccacttctgctgaaggactggatgcggccaattgtgatagca
gtgtttgtgggtgttctgtcattcagtattgcggtcctgaacaaagtagaaattggcttg
gatcagtttctttcaatgccagatgactcctacgtgatcgattatttccagtccatccgt
cagtacctgcatgcgggtccacccgtgtactttgtcctggaggaagggcacgactacact
tctctgaaagggcagaacatggtgtgcgggggcatgggctgcgacaacgactcgctggtg
cagcagatattcaccgcggctcagctggacagctatacccgaataggctttgcgccctcg
tcctggattgacgattattttgactgggtgaagccgcagtcttcttgctgtagggtctac
aatagcactgaccagttctgcaacgcttcagtggttgacccggcctgcgtccgctgcagg
cctctgacgccagagggcaaacagcggcctcagggcagagacttcatgcggttcctgccc
atgttcctttccgataacccgaaccccaggtgtggcaaagggggacatgctgcttacagt
tcagcagttaacatcctcggcaatgacaccggtgttggagccacttacttcatgacctac
cacacggtgcttcagacctctgctgacttcattgacgccatgaaaaaagcccgcctcatc
gccggtaacatcaccaaaaccatgggccttgagggcggtaattaccgtgtgttcccgtac
agtgtgttctatgtgttctacgagcagtacttgaccattattgacgacaccatctttaac
ctcggcgtgtccctgggcgccatctttctggtgaccatggttctcctgggctgtgaactg
tggtctgcagtgatcctgtgtgtcaccatcgccatgatcttggtcaacatgtttggcgtc
atgtggctgtggggcatcagtctgaatgcggtttccttggtcaacttggtgatgagctgt
ggcatttccgtggagttctgcagccacataacaagagcgttcacagtgagtgcaaaggga
agccgcgtggaacgcgcagaagaggcgctctcacacatgggcagctctgtattcagtgga
atcacactaacaaaatttggagggattgtggtgttggcctttgccaagtctcagattttc
cagatattttacttcaggatgtatttagctatggtcttactgggagccactcatgggttg
atattcctccccgtcttactcagctacataggaccatcaataaataaagccaaaaccttg
gccactcaagagagatacaaaggtacagagcgagaacaactcctaaatttctag
DBGET
integrated database retrieval system
