Equus caballus (horse): 100059315
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Entry
100059315 CDS
T01058
Symbol
TNXB
Name
(RefSeq) tenascin-X isoform X7
KO
K06252
tenascin
Organism
ecb
Equus caballus (horse)
Pathway
ecb04151
PI3K-Akt signaling pathway
ecb04510
Focal adhesion
ecb04512
ECM-receptor interaction
ecb05165
Human papillomavirus infection
ecb05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100059315 (TNXB)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100059315 (TNXB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100059315 (TNXB)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100059315 (TNXB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100059315 (TNXB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
100059315 (TNXB)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100059315 (TNXB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
NDNF
hEGF
Motif
Other DBs
NCBI-GeneID:
100059315
NCBI-ProteinID:
XP_014589806
LinkDB
All DBs
Position
20:complement(32581324..32642237)
Genome browser
AA seq
2927 aa
AA seq
DB search
MMAAQCSLTSNLALLVLLGTVQAGPFSPRSNVTLPAPRPPPQPGGRTEEPRRGSPSSQLY
EHTVQGGEKQVVFTHRINLPPSSGCGCPPGTEPPVPASEVQALRIRLEILEELVKGLKEQ
CTGGCCPAAAQAGTGQTDVRSLCSLHGVFDLSRCSCSCEPGWGGPTCSDPTDNEMPSSSP
PSATGSCPDDCNDQGRCVRGRCVCFPGYTGPSCGWPSCPEDCHGRGRCVQGVCVCRSGFS
GSDCSLRSCPRGCSQRGRCEDGRCVCDPGYTGEDCGMKSCPRGCSQRGRCENGRCVCNPG
YTGEDCGVRSCPRGCSQKGRCEDGRCVCDPGYAGEDCGSRSCPWDCGEGGRCVDGRCVCW
PGYAGEDCGTRTCPRDCRGRGRCEDGECICDAGYSGDDCGVRSCPGDCHQRGRCEDGRCV
CWPGYTGLDCGARACPRDCRGRGRCENGVCVCNAGYSGEDCGVRSCPGDCRGRGRCESGR
CVCWPGYTGRDCGTRACPGDCRGRGRCVDGRCVCNPGFTGEDCGSRRCPGDCRSRGRCED
GVCVCDAGYEGEDCGARSCPGGCRGRGQCLDGRCVCDDGYSGEDCSERRCPRDCSQHGVC
QDGVCTCWEGYAGEDCGLRTCPSNCHRRGRCEDGRCVCDSGYTGPSCSTRTCPADCRGRG
RCVQGVCVCHAGYSGEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPDCAIQTCP
EDCRGRGECREGSCICQDGYAGEDCGEEVPGIESMRMHLLEETTVRTEWTRAPGPVDAYE
IQFIPTTEGVSPPFTARVPSSASVYDQRGLAPGQEYQVTVRALRGTSWGPPASKTITTMI
DGPQDLRVVGVTPTTLELSWLRPQAEVDRFVVSYVSAGNQRVRLEVPPEADGTLLTDLMP
GVEYVVTVTAERGRAVSYPASVRANTAPGHYSYPEVRPPAPPPRSRPRPASASRPPRPAR
PPRPSRPSRPAEEGEEESRPGPSLPLPPRRSWANLTAELGRFRGTVQDLERHLRAHGYPL
RANQTYTSVARHIHEYLQRRRLTAAAPVGSPAHQPRRPHPTTSPDSGTWKRDSNQGIYGL
SPEGVDRVAAPRHPKPEVLGSSADGALLVSLDGLRGHFERVVLRWRPQPPAEGPSGEVTV
PGTTRTVSLPDLRPGTTYHVEVHGVRAGQTSKSYAFITTTGSSPSGLLGATDEPPPSGPS
TTQGVRAPVLQQRPQELAELRVLGKDKTGHLRVAWTAQPDTFAHFQLRLSVPEGPEVHEE
LLPGNVRQALVPSPPPGAPYELSLRGVPPKGEPSAPLIYQGIMDKDGEKPGKPLVPPRLG
ELTATDATSSSLLLHWTVPEGEFDSFVIQYKDRDGLQVVPVEGPQRSALITNLDLGRKYK
FVLYGLVGKKRHGPLVAEAKIVPQSDPSPATPPRLGKLWVTDPTPDSLHLSWTVPEGQFD
SFVVQYRDRDGRPQVVPVEGPERSITVSHLDPDHKYRFSLFGIANKKRHGPLTVDGTTAP
EKREEPHHPEAPEQPLLGELTVTDVTPDSLRLAWTVAQGSFDSFMVQYKDAQGQPQAVPI
EGNENEVTIAGLESDRKYKMNLYGLHGRQRVGPVSVVATTAPQDVADETPSPTEVEEAPS
STEPSTEAPEPPEEPLLGELTVTGSSPDSLSLSWTVPQGHFDFFTVQYKDRDGRPQVVRV
GGEENEVTIGGLEPGRKYKMNLYGLYEGQRVGPVSTVGVTAPQPEETPPATEHPMEPRLG
ELTVTDVTPNSVGLAWTVPEGQFDSFMIQYKDRDGQPQVVPVDADQREATVPSLEPAHKY
KINFYGLHGGQRMGPLSVIAVTAPLLPAPATESLQEPRLGELTVTDVTQDSVGLSWTEPE
GEFDSFVVQYKDRDGQPQVVPVAADQREVTIPGLEPSRKYKFLLFGIQDGKRRSPVSVEA
KTAAQGDASPGTPPRLGELWVTDPTPDSLHLSWTVPEGHFDSFVVQFKDRDGPRVVPVEG
HERSVTITPLDTGRKYRFLLYGLLGKRRHGPLTADGTTETRNTTDNAGTKRPPKPRLGDE
LQVTSVTPDSVGLSWTVPEGQFDSFVVQYKDRDGQPQVVPVAADRHEVTIPGLEPNRKYK
FLLYGLAGRKRLGPISADGTTAPLEKEQQPPPRLGELTVTDETPDSLHLSWTMAQGPFDS
FVVQYRDTDGQPRAVPVAADQREVTIEGLEPGRKYKFLLYGLLGGQRLGPVSVLGVTAPE
EDTPAPWHPATEAPEPPKGPHLGTLAVTNGTPDSLRLSWSVTQGPFDSFVVQYRDTDGQP
QALLVGGDQNKVLVSGLEPSTSYKFFLYGLHEGKRLGPVSAEGTTGSAPPGQTPGEPGPR
LSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRYGVPSPSTLEPHPRPLLQRELTVPGTRRS
AVLRDLRPGILYSLTLYGLRGPHKADSIQGTARTLSPVLESPRDLQFSEIGETSAKVSWT
PPPSRVDSFKVSYQLADGGEPQSVQVDGRTRTQRLKGLIPGAQYEVTVVSVRGFEESEPL
TGFLTTVPDGPTQLRALNLTDGSALLHWKPPQAPVDTYDIRVTAPRAPPLQASAPGSSVD
YSLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEAPRDLEAQEVTPRTAVLTWTEPQ
VPPTGYLLSFHTPGGQIQEILLPGGITSHQLRGLFPSTPYSAWLRAMWGESLTPPVSTSF
TTGGLRIPFPRDCGEEMQNGPSTSRTTTIFLNGNRERPLNVFCDMETDGGGWLVFQRRMD
GQTDFWRDWEDYAHGFGNISREFWLGNEALHSLTTAGDYSMRVDLRAGDEAVFAQYDSFR
VDSAADYYRLHLEGYHGTAGDSMSYHSGSVFSARDRDPNNLLISCAVSYRGAWWYRNCHY
ANLNGLYGSTVDHQGVSWYYWKGFDFSVPFTEMKLRPRSYRPPARGG
NT seq
8784 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagcccaatgttccctaacctccaacctggccctcctggtgctgctgggcaca
gtgcaagcaggccctttctctccacggtccaatgtgacactcccagccccacggccccct
ccccagcctgggggccgcaccgaggagccaagaaggggaagcccctcttctcagctttat
gagcacactgtccaaggaggagagaagcaggtggtgttcacccaccgtattaacctgccc
ccttcatctggctgtggctgtcccccgggcactgagcccccggtgcctgcttcagaggtg
caggccctgaggatccggctagagatcctggaggagctggtgaaagggctcaaggaacag
tgcactggcggatgttgtcctgctgctgcccaggctggcacaggccagacagacgttcgt
agcctctgcagtctccatggcgtgtttgacctgagccgctgctcctgctcctgtgagccg
ggctggggtgggcccacctgctcggatcccacagacaacgagatgccctcctcctcccca
ccctcagcgaccgggtcctgcccagatgactgcaacgatcagggtcgctgtgtccgcggt
cgctgcgtgtgcttccctggctacactggccccagctgtggctggccctcctgccccgag
gactgccacggccgcgggcgctgcgtgcagggcgtgtgcgtgtgccggtcgggcttctca
ggcagcgactgcagcctgcgctcctgccctcggggctgcagccagagggggcgctgcgag
gacgggcgctgcgtgtgcgaccccggctacactggcgaggactgtgggatgaaaagctgc
cctcgaggttgcagccagagggggcgctgcgagaatgggcgctgcgtgtgcaaccccggt
tacaccggcgaggactgtggggtgaggagctgcccccggggctgcagccagaaggggcgc
tgtgaggacgggcgctgcgtctgtgaccccggctacgctggcgaagactgtggctcgcgg
agctgcccgtgggactgcggcgagggcggacgctgcgtggacggccgctgcgtgtgctgg
ccggggtacgcgggcgaggactgcggcacgcggacgtgcccgcgcgactgccgaggccgt
gggcgctgcgaggatggcgaatgcatttgcgacgcaggctacagcggggacgattgcggc
gtacgtagctgccctggcgactgccaccaaaggggccgctgcgaggacggccgctgtgtg
tgctggccagggtacacagggcttgactgcggcgcacgcgcctgcccgcgagactgtcgg
ggccgcgggcgctgcgagaacggcgtgtgcgtgtgcaatgcgggctacagcggcgaggac
tgcggcgtgcgcagctgtcccggggactgtcgcggccggggccgttgcgagagtggccgc
tgcgtgtgttggcccgggtatacaggacgggactgcggcacgcgcgcctgccctggcgac
tgtcgcgggcgcgggcggtgcgtggacggccgctgcgtatgcaatccgggcttcacaggt
gaggattgcgggagtcgtcggtgccctggggactgtcgcagtcgcggccgctgcgaggat
ggcgtgtgcgtgtgcgacgcaggctacgagggcgaggactgcggcgcgcgcagctgcccc
ggaggttgccgaggtcgcggccagtgcctggacgggcgctgcgtgtgcgacgacggctac
tcgggcgaggactgcagcgagaggcggtgcccgcgcgactgcagccagcacggcgtgtgc
caggacggtgtgtgtacctgttgggagggctacgcgggcgaggactgcggcctccgtact
tgtccctccaactgccaccgacgtggccgctgtgaggacggccgatgcgtgtgcgactca
ggctatactggcccctcctgctcaacccgcacctgcccggccgactgccggggccgtggg
cgctgtgtgcagggagtgtgcgtgtgccacgcgggctacagcggcgaggactgtgggcaa
gaagaacctcccgccagcgcctgccctgggggctgcgggcccagggaattgtgccgagca
ggccagtgtgtatgtgtcgagggcttccgaggccccgactgcgccatccagacgtgcccc
gaggactgccgcggccggggagagtgtcgtgagggcagctgcatctgccaagatggctat
gcaggggaggattgcggggaagaggtgcccggcattgagagcatgaggatgcacctcctg
gaggagacgacagttcgaacagagtggacccgggctcctggccctgtggatgcctatgaa
attcagttcatccccacgacagagggagtgagcccccccttcacagcacgggtgcccagc
tctgcctcagtctatgaccagagaggattggcccctggtcaggagtaccaggtcactgtt
cgtgctcttcgagggactagctggggccctcctgcctccaagaccatcaccaccatgatc
gatggcccccaggacctccgcgtggtgggtgtgacaccaaccacactggaactcagctgg
ctgcgcccccaggctgaggtggaccgatttgtggtgtcctacgttagtgctggcaaccag
agagtgcggctggaagtgccccctgaggcagacgggacgctgctaactgacttgatgcca
ggcgtggaatatgtggtgactgtcactgcagagcggggccgggcagtaagctacccggct
tctgtcagggctaacacagcaccaggtcactacagttacccggaggtgcgccccccagcc
ccgccccccaggtcccggccccggccggcctcggcctcacggcctccgcgccctgctcgg
ccccctcggccctcacggccctcacggccggcggaggagggggaggaggagtctcggcct
gggcctagcctgcccctgccccctcgacggtcgtgggccaacctgacggccgagctgggc
cgcttccgcggcacggtgcaggacctggagcgccacctgcgggcccacggctacccactg
cgggccaaccagacctacacgtcggtggcgcgccacatccatgaatacttgcagcggcgg
cgtctgacggctgccgcccccgtcggctcccccgcacaccagccccgtcgcccccacccc
accaccagccccgactcaggcacctggaagcgggactccaaccagggcatctacggcctc
tcacccgaaggcgtcgaccgagtggctgcgccccgccaccccaagcccgaggtgctgggc
agttccgctgacggcgccctactcgtatccctcgatgggctccgcggccacttcgagcgc
gtggtgctgcgctggcggccccagccgcccgcagagggccccagcggggaggtgaccgtg
ccgggcaccacgcgcaccgtcagcctacccgatctcaggcccggcaccacctaccacgtg
gaggtccatggggtgcgggcagggcagacctccaagtcctacgccttcatcaccaccaca
gggtcctccccctcaggcctcttgggggcgactgatgagcctcctccctccggcccttca
acgactcaaggggtccgggctcccgtcctgcagcagcgcccccaggagctggcagagttg
cgggtgctgggcaaagacaagacagggcacctccgcgtggcctggaccgcccagcctgac
acctttgcccacttccagctgcgcctgagcgtgcccgaagggccggaagttcatgaggaa
ctactgccagggaatgtccgccaggctctggtgccctcaccccctcctggagccccctat
gagttgtcacttcgtggggtccctcccaagggcgagccctctgcccctctcatctaccaa
ggcattatggacaaggatggggagaagcctgggaagccattggtcccaccacgcctgggc
gagctgacagcgacagatgcaacctccagctccctgcttctgcactggacagtccctgag
ggcgagtttgactccttcgtgatccagtacaaggacagggatgggctccaggtggtgccc
gtggaggggccccagcgctcagccctcatcaccaacctggacctcggccgaaagtacaaa
tttgtcctgtatggactcgtgggcaagaagaggcacggacccctagtggctgaagccaag
atagtgcctcagagtgatcccagcccagcaactccaccccgcctgggaaagctgtgggtg
acagatcccacaccagattcgctgcacctctcctggactgtccctgagggccagtttgac
tccttcgtggttcaatacagggacagggatggacggccccaggtggtgcctgtagaaggg
cccgagcgctccatcactgtttcccacctggaccccgaccacaagtacagattcagtctg
tttgggattgccaacaagaagcggcatggccccctcacggttgatggcaccactgcccca
gagaagagagaggagccgcaccacccagaggcccccgagcagcccctgctgggggaactg
acagtgaccgacgtcaccccagactccctgcgcctggcctggaccgtggcccagggttcc
ttcgactccttcatggtccagtacaaggatgcgcaggggcagccccaggcagtgcccatc
gaggggaatgagaatgaggtcaccatcgctggtttggagtccgaccgaaagtataagatg
aacctctacgggcttcatggcaggcagcgtgtggggcctgtgtctgtggtggccaccacc
gccccccaggatgttgcagatgagacccccagccccactgaggtggaggaggcgcccagc
tccacagaacccagcacagaggccccagagccccccgaggagcccctcctgggggagctg
acggtgacaggatcttccccagactcgctgagcctgtcctggaccgtcccccagggccac
tttgacttcttcaccgttcagtacaaggacagagatggccggccccaggtggtgcgtgtc
gggggtgaggagaacgaggtcaccattgggggcctggagccggggcgcaagtacaagatg
aacctgtatggcctgtacgagggacagcgtgtgggccccgtgtccacggtgggcgtgacc
gctccacagccagaagagactcctccagccacagagcaccccatggagccacgcctgggg
gagctgacagtgacggatgtgactcccaactctgtgggcctcgcatggaccgtccctgag
ggccaatttgactccttcatgatccagtacaaggacagggatgggcagccccaggtggta
cctgtggatgcagaccagcgtgaggccactgtccccagcctggagcctgcacacaaatac
aagataaacttctacgggctacatggtgggcagcgtatgggccccctctctgtgatagct
gtgacggctcccctcctgccagccccagccacagagtccctccaggagccacgcctgggg
gagctgacagtgacagatgtgacccaggactccgtgggcctctcgtggacagaacccgag
ggtgaattcgactccttcgtggtccagtacaaggacagggatgggcagccccaggtggtg
cctgtggccgcagaccagcgcgaggtcaccatccctggcctggagcccagtaggaaatac
aagttcctgctctttgggatccaggatgggaaacgacgcagcccagtctctgtggaggca
aagacggctgcccaaggtgacgccagcccagggaccccaccccgcctcggggagctgtgg
gtgacagaccccaccccagactcactgcacctctcctggacagtccctgagggccacttt
gactcctttgtggtccagttcaaggacagggatgggccccgggtggtgcctgtggagggc
catgagcgctcggtcaccatcacccctctggacaccggccgcaagtacagattcctcctc
tacggcctcctgggcaagaggcgccacggccccctcactgcagacggcaccacagagacc
cggaatactacggacaatgctggcacaaagcgtcccccaaaacctcgtctgggggatgag
ctgcaggtgaccagcgtgacaccggactccgtgggcctctcctggacagtccctgagggc
cagtttgactcctttgtggtccagtacaaggacagggacgggcagccccaggtggtgcct
gtggctgcagaccggcatgaggtcaccattcccggcctggagcccaataggaaatacaag
ttcctgctctacgggctggcaggcaggaagcggctgggccccatctctgctgacggcacc
acagctcccctggagaaggagcagcagcccccaccccgcctgggggagctgacggtgacg
gatgagaccccagactccctgcacctctcgtggacgatggcccagggcccctttgactcc
ttcgtggttcagtacagggacacagacggacagccccgggccgtacctgtggccgcagac
cagcgggaggtcaccatagaaggcctggagcctggcaggaaatacaagtttctgctgtat
gggctcctaggagggcagcgcctgggccccgtctctgtcctgggagtgacagccccagaa
gaagacacgccagccccctggcaccctgccacagaggccccagagccccccaaagggccc
cacctagggacgctggcagtgaccaacggaaccccagactccctgcgcctctcatggagt
gtgacccagggcccctttgactccttcgtggtccagtatcgggacacagacgggcagccc
caggccttgctcgtgggtggcgaccagaacaaagtcctcgtgtcaggcctggagcccagc
acctcctacaagttcttcctctatggcctccatgaagggaagcgcctggggcctgtctca
gccgagggcaccacagggtcagctcctcctggtcagaccccaggggagccagggccccgc
ctgtcccagctgtctgtgactgacgtgaccacaagttcactgcggctcaactgggaggcc
ccacctggggcctttgactccttcctgctccgctacggggtcccgtcaccaagcactctg
gagccacatccgcgtcccctgctgcagcgggagctgacagtgccggggacacggcgctca
gccgtgctccgggacctacgtccagggatcctgtacagccttacattgtatgggctgcgt
gggccccacaaggcagacagcatccagggcaccgcccgtaccctcagcccagttctggag
agcccccgtgaccttcaattcagcgaaattggggagacctcagccaaagtcagctggacg
cccccaccgtccagagtggacagcttcaaagtttcctaccagctggcagatggaggggag
ccacagagcgtgcaggtggatggccgaacccggacccagagactcaaggggctgatccca
ggggctcagtacgaggtgaccgtggtctctgtccgcggctttgaggagagtgagcctctc
acaggcttcctcaccacagttcctgacggccccacccagctgcgtgcactgaacttgact
gacggatcagccctgctgcactggaagcccccccaggcccctgtggacacatatgacatc
agagtcacagccccaagggccccccctctacaggcctcagcccccggcagctctgtggac
tactccttgcacgaccttgtgctccacaccaactacacggcgaccgtgcgtggccttcgg
ggccccaacctcacctccccagccagcatcaccttcaccacaggattggaagcccctcgg
gacttagaagcccaggaagtgaccccccgcacggccgtgctcacttggacagagccccaa
gtcccgccaactggctacctgctcagcttccacacccctggcggacagatccaggagatc
ctgctcccaggaggcatcacctctcaccagctccggggcctctttccctccaccccctac
agcgcatggctccgggccatgtggggcgagagcctcacgccacccgtgtccacctctttc
accactggtggactgagaatccctttcccccgggactgtggggaggagatgcagaacggg
cccagcacctcgaggaccaccaccatcttcctcaatggcaaccgcgagcggcccctgaac
gtgttttgtgacatggagaccgatgggggtggctggctggtgttccagcgccgcatggat
ggacaaacggacttctggagggactgggaggactatgcccatggttttgggaacatctcc
agggagttctggctgggcaacgaggccctacacagcctgacgacagccggggactactcc
atgcgtgtggacctgcgggctggggacgaggccgtgtttgcccagtatgactccttccga
gtagactcagccgctgactactaccgcctccacctggagggctaccatggcaccgcaggg
gactccatgagttaccacagcggcagtgtcttttccgctcgtgatcgagaccccaacaac
ttgctcatctcctgtgccgtctcttaccgaggggcctggtggtacaggaactgccactat
gccaacctcaacgggctctacgggagcacagtggaccaccagggagtgagctggtactac
tggaagggcttcgatttctccgtgcccttcacggaaatgaaactaagaccaagaagctac
aggcctccggcccggggaggttga
DBGET
integrated database retrieval system
